RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 ADH1AP07327 375 aa9.72□□□□□ -0.85
LINC01088-209ENST00000512130 SCG3Q8WXD2 468 aaKnown RBP9.72□□□□□ -0.85
LINC01088-209ENST00000512130 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
LINC01088-209ENST00000512130 MKNK1Q9BUB5 465 aa9.72□□□□□ -0.85
LINC01088-209ENST00000512130 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
LINC01088-209ENST00000512130 PKD2L1Q9P0L9 805 aa9.72□□□□□ -0.85
LINC01088-209ENST00000512130 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
LINC01088-209ENST00000512130 ADD1P35611 737 aaKnown RBP9.71□□□□□ -0.86
LINC01088-209ENST00000512130 RGS22Q8NE09 1264 aa9.71□□□□□ -0.86
LINC01088-209ENST00000512130 BIN2Q9UBW5 565 aaPredicted RBP9.71□□□□□ -0.86
LINC01088-209ENST00000512130 EGFL7Q9UHF1 273 aa9.71□□□□□ -0.86
LINC01088-209ENST00000512130 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.86
LINC01088-209ENST00000512130 ZIC2O95409 532 aaPredicted RBP9.7□□□□□ -0.86
LINC01088-209ENST00000512130 STAU1O95793 577 aaKnown RBP9.7□□□□□ -0.86
LINC01088-209ENST00000512130 SMTNP53814 917 aa9.7□□□□□ -0.86
LINC01088-209ENST00000512130 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
LINC01088-209ENST00000512130 COL26A1Q96A83 441 aa9.7□□□□□ -0.86
LINC01088-209ENST00000512130 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
LINC01088-209ENST00000512130 A6NJY4 79 aa9.69□□□□□ -0.86
LINC01088-209ENST00000512130 PPP1R12BO60237 982 aaPredicted RBP9.69□□□□□ -0.86
LINC01088-209ENST00000512130 SCNN1AP37088 669 aa9.69□□□□□ -0.86
LINC01088-209ENST00000512130 WDR4P57081 412 aaKnown RBP9.69□□□□□ -0.86
LINC01088-209ENST00000512130 FKBP5Q13451 457 aaPredicted RBP9.69□□□□□ -0.86
LINC01088-209ENST00000512130 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
LINC01088-209ENST00000512130 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
LINC01088-209ENST00000512130 TSPAN10Q9H1Z9 355 aaPredicted RBP9.69□□□□□ -0.86
LINC01088-209ENST00000512130 TLR1Q15399 786 aa9.68□□□□□ -0.86
LINC01088-209ENST00000512130 GLYCTKQ8IVS8 523 aa9.68□□□□□ -0.86
LINC01088-209ENST00000512130 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
LINC01088-209ENST00000512130 GTF3C2Q8WUA4 911 aaPredicted RBP9.68□□□□□ -0.86
LINC01088-209ENST00000512130 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
LINC01088-209ENST00000512130 ESYT1Q9BSJ8 1104 aa9.68□□□□□ -0.86
LINC01088-209ENST00000512130 SCHIP1Q9P0W5 487 aaPredicted RBP9.68□□□□□ -0.86
LINC01088-209ENST00000512130 A0A1W2PRU2 124 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 TNFRSF10AO00220 468 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
LINC01088-209ENST00000512130 EPHA4P54764 986 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 CBLBQ13191 982 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 CLN3Q13286 438 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 SLC9A9Q8IVB4 645 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 ITPKCQ96DU7 683 aa9.67□□□□□ -0.86
LINC01088-209ENST00000512130 H3BRB1 525 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 J3QL48 77 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 MEN1O00255 615 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 GDF9O60383 454 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 IL2RAP01589 272 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 PTGIRP43119 386 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 ZNF211Q13398 564 aaPredicted RBP9.66□□□□□ -0.86
LINC01088-209ENST00000512130 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
LINC01088-209ENST00000512130 Q6ZVU0 165 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
LINC01088-209ENST00000512130 SEPT3Q9UH03 358 aa9.66□□□□□ -0.86
LINC01088-209ENST00000512130 ICMTO60725 284 aa9.65□□□□□ -0.86
LINC01088-209ENST00000512130 PSMA6P60900 246 aaKnown RBP9.65□□□□□ -0.86
LINC01088-209ENST00000512130 FKBP4Q02790 459 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC01088-209ENST00000512130 MTFR1Q15390 333 aa9.65□□□□□ -0.86
LINC01088-209ENST00000512130 STAG2Q8N3U4 1231 aa9.65□□□□□ -0.86
LINC01088-209ENST00000512130 ERCC3P19447 782 aa9.64□□□□□ -0.87
LINC01088-209ENST00000512130 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
LINC01088-209ENST00000512130 FOXK2Q01167 660 aa9.64□□□□□ -0.87
LINC01088-209ENST00000512130 RELBQ01201 579 aa9.64□□□□□ -0.87
LINC01088-209ENST00000512130 NAA30Q147X3 362 aaPredicted RBP9.64□□□□□ -0.87
LINC01088-209ENST00000512130 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
LINC01088-209ENST00000512130 ZFAND3Q9H8U3 227 aa9.64□□□□□ -0.87
LINC01088-209ENST00000512130 ANO2Q9NQ90 1003 aa9.64□□□□□ -0.87
LINC01088-209ENST00000512130 TOR4AQ9NXH8 423 aa9.64□□□□□ -0.87
LINC01088-209ENST00000512130 C21orf2O43822 256 aa9.63□□□□□ -0.87
LINC01088-209ENST00000512130 TIMP2P16035 220 aa9.63□□□□□ -0.87
LINC01088-209ENST00000512130 TBCELQ5QJ74 424 aa9.63□□□□□ -0.87
LINC01088-209ENST00000512130 AGBL1Q96MI9 1066 aa9.63□□□□□ -0.87
LINC01088-209ENST00000512130 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
LINC01088-209ENST00000512130 UPP2O95045 317 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 SMPD1P17405 629 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 PRR20EP86478 221 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 PRR20CP86479 221 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 PRR20DP86480 221 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 PRR20BP86481 221 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 PRR20AP86496 221 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 CENPCQ03188 943 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 FOXD4L5Q5VV16 416 aaPredicted RBP9.62□□□□□ -0.87
LINC01088-209ENST00000512130 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
LINC01088-209ENST00000512130 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
LINC01088-209ENST00000512130 DNMT3AQ9Y6K1 912 aaPredicted RBP9.62□□□□□ -0.87
LINC01088-209ENST00000512130 C16orf46Q6P387 395 aa9.61□□□□□ -0.87
LINC01088-209ENST00000512130 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
LINC01088-209ENST00000512130 C2orf49Q9BVC5 232 aaPredicted RBP9.61□□□□□ -0.87
LINC01088-209ENST00000512130 ZNF395Q9H8N7 513 aaPredicted RBP9.61□□□□□ -0.87
LINC01088-209ENST00000512130 CABP1Q9NZU7 370 aa9.61□□□□□ -0.87
LINC01088-209ENST00000512130 ZNF232Q9UNY5 417 aa9.61□□□□□ -0.87
LINC01088-209ENST00000512130 SERTM1A2A2V5 107 aa9.6□□□□□ -0.87
LINC01088-209ENST00000512130 FAM13AO94988 1023 aa9.6□□□□□ -0.87
LINC01088-209ENST00000512130 TMEM214Q6NUQ4 689 aaKnown RBP9.6□□□□□ -0.87
LINC01088-209ENST00000512130 CAPN12Q6ZSI9 719 aa9.6□□□□□ -0.87
LINC01088-209ENST00000512130 KDF1Q8NAX2 398 aaPredicted RBP9.6□□□□□ -0.87
LINC01088-209ENST00000512130 TSEN34Q9BSV6 310 aaKnown RBP9.6□□□□□ -0.87
LINC01088-209ENST00000512130 AMOTL2Q9Y2J4 779 aa9.6□□□□□ -0.87
LINC01088-209ENST00000512130 SLC27A3Q5K4L6 730 aa9.59□□□□□ -0.87
LINC01088-209ENST00000512130 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
LINC01088-209ENST00000512130 NIFKQ9BYG3 293 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms