RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 NME9Q86XW9 330 aa18.37■□□□□ 0.53
SSBP2-215ENST00000512098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSBP2-215ENST00000512098 LTV1Q96GA3 475 aaPredicted RBP18.37■□□□□ 0.53
SSBP2-215ENST00000512098 LBX1P52954 281 aa18.36■□□□□ 0.53
SSBP2-215ENST00000512098 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
SSBP2-215ENST00000512098 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
SSBP2-215ENST00000512098 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
SSBP2-215ENST00000512098 GNPATO15228 680 aa18.34■□□□□ 0.53
SSBP2-215ENST00000512098 TMF1P82094 1093 aa18.34■□□□□ 0.53
SSBP2-215ENST00000512098 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.52
SSBP2-215ENST00000512098 SIK1P57059 783 aa18.33■□□□□ 0.52
SSBP2-215ENST00000512098 POTECB2RU33 542 aa18.32■□□□□ 0.52
SSBP2-215ENST00000512098 CCDC88AQ3V6T2 1871 aa18.32■□□□□ 0.52
SSBP2-215ENST00000512098 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
SSBP2-215ENST00000512098 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
SSBP2-215ENST00000512098 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
SSBP2-215ENST00000512098 CCDC85CA6NKD9 419 aa18.3■□□□□ 0.52
SSBP2-215ENST00000512098 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
SSBP2-215ENST00000512098 PARP3Q9Y6F1 533 aa18.3■□□□□ 0.52
SSBP2-215ENST00000512098 TIAM2Q8IVF5 1701 aa18.29■□□□□ 0.52
SSBP2-215ENST00000512098 LMNB1P20700 586 aa18.29■□□□□ 0.52
SSBP2-215ENST00000512098 HOXC9P31274 260 aa18.29■□□□□ 0.52
SSBP2-215ENST00000512098 PIGBQ92521 554 aa18.29■□□□□ 0.52
SSBP2-215ENST00000512098 VEGFBP49765 207 aa18.28■□□□□ 0.52
SSBP2-215ENST00000512098 ITPK1Q13572 414 aa18.28■□□□□ 0.52
SSBP2-215ENST00000512098 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
SSBP2-215ENST00000512098 CHADLQ6NUI6 762 aa18.28■□□□□ 0.52
SSBP2-215ENST00000512098 RAPGEF4Q8WZA2 1011 aa18.28■□□□□ 0.52
SSBP2-215ENST00000512098 GYS1P13807 737 aa18.27■□□□□ 0.52
SSBP2-215ENST00000512098 ADRA2BP18089 450 aa18.27■□□□□ 0.52
SSBP2-215ENST00000512098 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
SSBP2-215ENST00000512098 RASSF7Q02833 373 aa18.26■□□□□ 0.51
SSBP2-215ENST00000512098 NBPF6Q5VWK0 638 aa18.26■□□□□ 0.51
SSBP2-215ENST00000512098 NBPF4Q96M43 638 aa18.26■□□□□ 0.51
SSBP2-215ENST00000512098 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
SSBP2-215ENST00000512098 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
SSBP2-215ENST00000512098 CYP27B1O15528 508 aa18.25■□□□□ 0.51
SSBP2-215ENST00000512098 TATP17735 454 aaPredicted RBP18.25■□□□□ 0.51
SSBP2-215ENST00000512098 PASKQ96RG2 1323 aa18.24■□□□□ 0.51
SSBP2-215ENST00000512098 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
SSBP2-215ENST00000512098 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
SSBP2-215ENST00000512098 DICER1Q9UPY3 1922 aaKnown RBP18.23■□□□□ 0.51
SSBP2-215ENST00000512098 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
SSBP2-215ENST00000512098 AMPHP49418 695 aa18.22■□□□□ 0.51
SSBP2-215ENST00000512098 NKX1-1Q15270 411 aaPredicted RBP18.22■□□□□ 0.51
SSBP2-215ENST00000512098 DPY19L2Q6NUT2 758 aa18.22■□□□□ 0.51
SSBP2-215ENST00000512098 ZNF831Q5JPB2 1677 aa18.22■□□□□ 0.51
SSBP2-215ENST00000512098 RTL1A6NKG5 1358 aa18.21■□□□□ 0.51
SSBP2-215ENST00000512098 CHRNA5P30532 468 aa18.21■□□□□ 0.51
SSBP2-215ENST00000512098 MAP2K1Q02750 393 aaPredicted RBP18.21■□□□□ 0.51
SSBP2-215ENST00000512098 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
SSBP2-215ENST00000512098 HDGFL2Q7Z4V5 671 aaPredicted RBP18.2■□□□□ 0.5
SSBP2-215ENST00000512098 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
SSBP2-215ENST00000512098 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
SSBP2-215ENST00000512098 RFC4P35249 363 aa18.19■□□□□ 0.5
SSBP2-215ENST00000512098 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
SSBP2-215ENST00000512098 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
SSBP2-215ENST00000512098 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
SSBP2-215ENST00000512098 SMG6Q86US8 1419 aaKnown RBP18.17■□□□□ 0.5
SSBP2-215ENST00000512098 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
SSBP2-215ENST00000512098 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
SSBP2-215ENST00000512098 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
SSBP2-215ENST00000512098 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
SSBP2-215ENST00000512098 KDRP35968 1356 aa18.17■□□□□ 0.5
SSBP2-215ENST00000512098 RPS6KA4O75676 772 aa18.16■□□□□ 0.5
SSBP2-215ENST00000512098 TMOD3Q9NYL9 352 aa18.16■□□□□ 0.5
SSBP2-215ENST00000512098 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
SSBP2-215ENST00000512098 DDR1Q08345 913 aa18.15■□□□□ 0.5
SSBP2-215ENST00000512098 NFKBIEO00221 500 aa18.14■□□□□ 0.49
SSBP2-215ENST00000512098 LDHDQ86WU2 507 aa18.14■□□□□ 0.49
SSBP2-215ENST00000512098 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
SSBP2-215ENST00000512098 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
SSBP2-215ENST00000512098 SCN4AP35499 1836 aa18.14■□□□□ 0.49
SSBP2-215ENST00000512098 THSD7BQ9C0I4 1608 aa18.13■□□□□ 0.49
SSBP2-215ENST00000512098 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
SSBP2-215ENST00000512098 FBLN1P23142 703 aa18.13■□□□□ 0.49
SSBP2-215ENST00000512098 DEFB115Q30KQ5 88 aa18.13■□□□□ 0.49
SSBP2-215ENST00000512098 COG3Q96JB2 828 aa18.13■□□□□ 0.49
SSBP2-215ENST00000512098 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
SSBP2-215ENST00000512098 WDR33Q9C0J8 1336 aaKnown RBP18.13■□□□□ 0.49
SSBP2-215ENST00000512098 SLC12A5Q9H2X9 1139 aa18.12■□□□□ 0.49
SSBP2-215ENST00000512098 FKBP8Q14318 412 aa18.11■□□□□ 0.49
SSBP2-215ENST00000512098 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
SSBP2-215ENST00000512098 SLC4A9Q96Q91 983 aa18.11■□□□□ 0.49
SSBP2-215ENST00000512098 FER1L6Q2WGJ9 1857 aa18.1■□□□□ 0.49
SSBP2-215ENST00000512098 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
SSBP2-215ENST00000512098 TTLL6Q8N841 843 aa18.1■□□□□ 0.49
SSBP2-215ENST00000512098 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
SSBP2-215ENST00000512098 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
SSBP2-215ENST00000512098 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
SSBP2-215ENST00000512098 TM4SF1P30408 202 aa18.09■□□□□ 0.49
SSBP2-215ENST00000512098 PRPF38BQ5VTL8 546 aaKnown RBP18.09■□□□□ 0.49
SSBP2-215ENST00000512098 INSRP06213 1382 aa18.08■□□□□ 0.49
SSBP2-215ENST00000512098 IQCA1LA6NCM1 817 aa18.08■□□□□ 0.48
SSBP2-215ENST00000512098 ERFEQ4G0M1 354 aa18.08■□□□□ 0.48
SSBP2-215ENST00000512098 MCOLN1Q9GZU1 580 aa18.08■□□□□ 0.48
SSBP2-215ENST00000512098 CASP8AP2Q9UKL3 1982 aa18.08■□□□□ 0.48
SSBP2-215ENST00000512098 NRXN2Q9P2S2 1712 aa18.07■□□□□ 0.48
SSBP2-215ENST00000512098 BEGAINQ9BUH8 593 aa18.07■□□□□ 0.48
SSBP2-215ENST00000512098 SPG7Q9UQ90 795 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms