RNA–Protein interactions for RNA: ENST00000511949.5

SH3TC2-210, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 4

Gene SH3TC2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-210ENST00000511949 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
SH3TC2-210ENST00000511949 ASAP1Q9ULH1 1129 aa16.39■□□□□ 0.21
SH3TC2-210ENST00000511949 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
SH3TC2-210ENST00000511949 FLAD1Q8NFF5 587 aa16.38■□□□□ 0.21
SH3TC2-210ENST00000511949 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
SH3TC2-210ENST00000511949 AK7Q96M32 723 aa16.38■□□□□ 0.21
SH3TC2-210ENST00000511949 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
SH3TC2-210ENST00000511949 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
SH3TC2-210ENST00000511949 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
SH3TC2-210ENST00000511949 RIPK4P57078 832 aa16.37■□□□□ 0.21
SH3TC2-210ENST00000511949 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
SH3TC2-210ENST00000511949 RREB1Q92766 1687 aa16.36■□□□□ 0.21
SH3TC2-210ENST00000511949 MSH5O43196 834 aa16.35■□□□□ 0.21
SH3TC2-210ENST00000511949 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
SH3TC2-210ENST00000511949 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
SH3TC2-210ENST00000511949 LRRC4BQ9NT99 713 aa16.35■□□□□ 0.21
SH3TC2-210ENST00000511949 ITGB4P16144 1822 aa16.35■□□□□ 0.21
SH3TC2-210ENST00000511949 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
SH3TC2-210ENST00000511949 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
SH3TC2-210ENST00000511949 MCM10Q7L590 875 aa16.34■□□□□ 0.21
SH3TC2-210ENST00000511949 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
SH3TC2-210ENST00000511949 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
SH3TC2-210ENST00000511949 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
SH3TC2-210ENST00000511949 KCNQ4P56696 695 aa16.33■□□□□ 0.2
SH3TC2-210ENST00000511949 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
SH3TC2-210ENST00000511949 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.2
SH3TC2-210ENST00000511949 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.2
SH3TC2-210ENST00000511949 ZNF790Q6PG37 636 aa16.32■□□□□ 0.2
SH3TC2-210ENST00000511949 VSIG10Q8N0Z9 540 aa16.32■□□□□ 0.2
SH3TC2-210ENST00000511949 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
SH3TC2-210ENST00000511949 FMNL2Q96PY5 1086 aa16.32■□□□□ 0.2
SH3TC2-210ENST00000511949 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
SH3TC2-210ENST00000511949 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 STARD3NLO95772 234 aa16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 SLC39A6Q13433 755 aa16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 SPON1Q9HCB6 807 aa16.31■□□□□ 0.2
SH3TC2-210ENST00000511949 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
SH3TC2-210ENST00000511949 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
SH3TC2-210ENST00000511949 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
SH3TC2-210ENST00000511949 LY75O60449 1722 aa16.3■□□□□ 0.2
SH3TC2-210ENST00000511949 MRC1P22897 1456 aa16.29■□□□□ 0.2
SH3TC2-210ENST00000511949 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
SH3TC2-210ENST00000511949 GNPATO15228 680 aa16.28■□□□□ 0.2
SH3TC2-210ENST00000511949 SSFA2P28290 1259 aa16.28■□□□□ 0.2
SH3TC2-210ENST00000511949 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
SH3TC2-210ENST00000511949 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
SH3TC2-210ENST00000511949 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
SH3TC2-210ENST00000511949 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
SH3TC2-210ENST00000511949 PHF14O94880 888 aa16.27■□□□□ 0.2
SH3TC2-210ENST00000511949 POLD1P28340 1107 aa16.27■□□□□ 0.2
SH3TC2-210ENST00000511949 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.2
SH3TC2-210ENST00000511949 MTFR1LQ9H019 292 aa16.27■□□□□ 0.2
SH3TC2-210ENST00000511949 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
SH3TC2-210ENST00000511949 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 APAF1O14727 1248 aa16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 ADRA2BP18089 450 aa16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 ITPK1Q13572 414 aa16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
SH3TC2-210ENST00000511949 RFC4P35249 363 aa16.25■□□□□ 0.19
SH3TC2-210ENST00000511949 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
SH3TC2-210ENST00000511949 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 C5P01031 1676 aa16.24■□□□□ 0.19
SH3TC2-210ENST00000511949 PNPLA7Q6ZV29 1317 aa16.23■□□□□ 0.19
SH3TC2-210ENST00000511949 A0A087WZG4 1122 aa16.23■□□□□ 0.19
SH3TC2-210ENST00000511949 RPS6KA4O75676 772 aa16.23■□□□□ 0.19
SH3TC2-210ENST00000511949 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
SH3TC2-210ENST00000511949 CHMP4AQ9BY43 222 aa16.23■□□□□ 0.19
SH3TC2-210ENST00000511949 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SH3TC2-210ENST00000511949 ZPR1O75312 459 aa16.22■□□□□ 0.19
SH3TC2-210ENST00000511949 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
SH3TC2-210ENST00000511949 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
SH3TC2-210ENST00000511949 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
SH3TC2-210ENST00000511949 C4BP0C0L5 1744 aa16.22■□□□□ 0.19
SH3TC2-210ENST00000511949 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 VIRMAQ69YN4 1812 aaKnown RBP16.21■□□□□ 0.19
SH3TC2-210ENST00000511949 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
SH3TC2-210ENST00000511949 GNAI1P63096 354 aa16.2■□□□□ 0.18
SH3TC2-210ENST00000511949 ARXQ96QS3 562 aa16.2■□□□□ 0.18
SH3TC2-210ENST00000511949 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
SH3TC2-210ENST00000511949 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
SH3TC2-210ENST00000511949 NLGN1Q8N2Q7 840 aa16.19■□□□□ 0.18
SH3TC2-210ENST00000511949 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
SH3TC2-210ENST00000511949 TRIM35Q9UPQ4 493 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms