RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-223	ENST00000511898	PHACTR3	Q96KR7	559 aa		10.32	□□□□□ -0.76
BRD8-223	ENST00000511898	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.32	□□□□□ -0.76
BRD8-223	ENST00000511898	LY75	O60449	1722 aa		10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	U2SURP	O15042	1029 aa	Known RBP	10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	CABP4	P57796	275 aa		10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	COL23A1	Q86Y22	540 aa	Predicted RBP	10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	MTFR1L	Q9H019	292 aa		10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	RSPH6A	Q9H0K4	717 aa		10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	TFCP2L1	Q9NZI6	479 aa		10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	CASZ1	Q86V15	1759 aa		10.31	□□□□□ -0.76
BRD8-223	ENST00000511898	RNMT	O43148	476 aa	Known RBP	10.3	□□□□□ -0.76
BRD8-223	ENST00000511898	LINC00116	Q8NCU8	138 aa		10.3	□□□□□ -0.76
BRD8-223	ENST00000511898	SLC16A10	Q8TF71	515 aa		10.3	□□□□□ -0.76
BRD8-223	ENST00000511898	CFAP53	Q96M91	514 aa		10.3	□□□□□ -0.76
BRD8-223	ENST00000511898	ITGB4	P16144	1822 aa		10.3	□□□□□ -0.76
BRD8-223	ENST00000511898	FCHSD2	O94868	740 aa		10.29	□□□□□ -0.76
BRD8-223	ENST00000511898	HMGB2	P26583	209 aa	Known RBP	10.29	□□□□□ -0.76
BRD8-223	ENST00000511898	SMIM5	Q71RC9	77 aa		10.29	□□□□□ -0.76
BRD8-223	ENST00000511898	IL17RE	Q8NFR9	667 aa		10.29	□□□□□ -0.76
BRD8-223	ENST00000511898	SLC52A2	Q9HAB3	445 aa		10.29	□□□□□ -0.76
BRD8-223	ENST00000511898	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.28	□□□□□ -0.76
BRD8-223	ENST00000511898	PRKAR2B	P31323	418 aa		10.28	□□□□□ -0.76
BRD8-223	ENST00000511898	ATP6V1A	P38606	617 aa		10.28	□□□□□ -0.76
BRD8-223	ENST00000511898	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
BRD8-223	ENST00000511898	RALBP1	Q15311	655 aa		10.28	□□□□□ -0.76
BRD8-223	ENST00000511898	NUDC	Q9Y266	331 aa		10.28	□□□□□ -0.76
BRD8-223	ENST00000511898	GNAT3	A8MTJ3	354 aa		10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	PTCD1	O75127	700 aa	Known RBP	10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	RC3H1	Q5TC82	1133 aa	Known RBP	10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	FLAD1	Q8NFF5	587 aa		10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	GAS2L2	Q8NHY3	880 aa		10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	PLEKHF1	Q96S99	279 aa		10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	RBM42	Q9BTD8	480 aa	Known RBP	10.26	□□□□□ -0.77
BRD8-223	ENST00000511898	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.25	□□□□□ -0.77
BRD8-223	ENST00000511898	SLC39A6	Q13433	755 aa		10.25	□□□□□ -0.77
BRD8-223	ENST00000511898	ARX	Q96QS3	562 aa		10.25	□□□□□ -0.77
BRD8-223	ENST00000511898	SYT17	Q9BSW7	474 aa		10.25	□□□□□ -0.77
BRD8-223	ENST00000511898	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.25	□□□□□ -0.77
BRD8-223	ENST00000511898	CEMIP	Q8WUJ3	1361 aa		10.25	□□□□□ -0.77
BRD8-223	ENST00000511898	SSFA2	P28290	1259 aa		10.24	□□□□□ -0.77
BRD8-223	ENST00000511898	AK7	Q96M32	723 aa		10.24	□□□□□ -0.77
BRD8-223	ENST00000511898	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.24	□□□□□ -0.77
BRD8-223	ENST00000511898	ADAMTS7	Q9UKP4	1686 aa		10.24	□□□□□ -0.77
BRD8-223	ENST00000511898	MAP3K5	Q99683	1374 aa		10.24	□□□□□ -0.77
BRD8-223	ENST00000511898	MRC1	P22897	1456 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	GNPAT	O15228	680 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	RPS6KA4	O75676	772 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	INTS5	Q6P9B9	1019 aa	Known RBP	10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	C4B	P0C0L5	1744 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	QSER1	Q2KHR3	1735 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	CNTNAP4	Q9C0A0	1308 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	TAF1L	Q8IZX4	1826 aa		10.23	□□□□□ -0.77
BRD8-223	ENST00000511898	C5	P01031	1676 aa		10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	SCN11A	Q9UI33	1791 aa		10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	HTATSF1	O43719	755 aa	Known RBP	10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	PHF14	O94880	888 aa		10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	DNAJC10	Q8IXB1	793 aa		10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	ARHGEF1	Q92888	912 aa	Known RBP	10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	ZNF831	Q5JPB2	1677 aa		10.22	□□□□□ -0.77
BRD8-223	ENST00000511898	COL24A1	Q17RW2	1714 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	TUBGCP6	Q96RT7	1819 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	KCNQ3	O43525	872 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	CYP19A1	P11511	503 aa	Predicted RBP	10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	POLD1	P28340	1107 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	CRKL	P46109	303 aa	Known RBP	10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	DCTN1	Q14203	1278 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	TRAPPC3L	Q5T215	181 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	MSL1	Q68DK7	614 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	ZNF790	Q6PG37	636 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	MCM10	Q7L590	875 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	VSIG10	Q8N0Z9	540 aa		10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	ZNF496	Q96IT1	587 aa	Predicted RBP	10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	RTCB	Q9Y3I0	505 aa	Known RBP	10.21	□□□□□ -0.77
BRD8-223	ENST00000511898	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.21	□□□□□ -0.78
BRD8-223	ENST00000511898	TEF	Q10587	303 aa		10.2	□□□□□ -0.78
BRD8-223	ENST00000511898	KCP	Q6ZWJ8	1503 aa		10.2	□□□□□ -0.78
BRD8-223	ENST00000511898	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.19	□□□□□ -0.78
BRD8-223	ENST00000511898	GYS1	P13807	737 aa		10.19	□□□□□ -0.78
BRD8-223	ENST00000511898	MYH14	Q7Z406	1995 aa	Known RBP	10.19	□□□□□ -0.78
BRD8-223	ENST00000511898	UBR3	Q6ZT12	1888 aa		10.19	□□□□□ -0.78
BRD8-223	ENST00000511898	BTBD11	A6QL63	1104 aa		10.18	□□□□□ -0.78
BRD8-223	ENST00000511898	SLC4A2	P04920	1241 aa		10.18	□□□□□ -0.78
BRD8-223	ENST00000511898	NFE2L2	Q16236	605 aa		10.18	□□□□□ -0.78
BRD8-223	ENST00000511898	CCDC87	Q9NVE4	849 aa		10.18	□□□□□ -0.78
BRD8-223	ENST00000511898	HEG1	Q9ULI3	1381 aa		10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	MYCN	P04198	464 aa	Predicted RBP	10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	TAF7	Q15545	349 aa	Predicted RBP	10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	TTC5	Q8N0Z6	440 aa		10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	NLGN1	Q8N2Q7	840 aa		10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	NLGN2	Q8NFZ4	835 aa		10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	RTF1	Q92541	710 aa	Known RBP	10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	PNN	Q9H307	717 aa	Known RBP	10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	ADAMTS8	Q9UP79	889 aa		10.17	□□□□□ -0.78
BRD8-223	ENST00000511898	COL5A3	P25940	1745 aa	Predicted RBP	10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	SOS1	Q07889	1333 aa	Predicted RBP	10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	CIC	Q96RK0	1608 aa	Predicted RBP	10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	RFC4	P35249	363 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	EIF5	P55010	431 aa	Known RBP	10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	FMNL2	Q96PY5	1086 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms