RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 RBM42Q9BTD8 480 aaKnown RBP22.55■■□□□ 1.2
SMN2-210ENST00000511812 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
SMN2-210ENST00000511812 C5P01031 1676 aa22.53■■□□□ 1.2
SMN2-210ENST00000511812 RNMTO43148 476 aaKnown RBP22.53■■□□□ 1.2
SMN2-210ENST00000511812 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
SMN2-210ENST00000511812 RALBP1Q15311 655 aa22.53■■□□□ 1.2
SMN2-210ENST00000511812 PTGER2P43116 358 aa22.52■■□□□ 1.2
SMN2-210ENST00000511812 SLC52A2Q9HAB3 445 aa22.52■■□□□ 1.2
SMN2-210ENST00000511812 LGR6Q9HBX8 967 aa22.52■■□□□ 1.2
SMN2-210ENST00000511812 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
SMN2-210ENST00000511812 POLD1P28340 1107 aa22.51■■□□□ 1.19
SMN2-210ENST00000511812 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
SMN2-210ENST00000511812 FCHSD2O94868 740 aa22.5■■□□□ 1.19
SMN2-210ENST00000511812 ITPK1Q13572 414 aa22.5■■□□□ 1.19
SMN2-210ENST00000511812 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
SMN2-210ENST00000511812 LINC00116Q8NCU8 138 aa22.5■■□□□ 1.19
SMN2-210ENST00000511812 GNAT3A8MTJ3 354 aa22.49■■□□□ 1.19
SMN2-210ENST00000511812 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
SMN2-210ENST00000511812 C4BP0C0L5 1744 aa22.48■■□□□ 1.19
SMN2-210ENST00000511812 SCN11AQ9UI33 1791 aa22.48■■□□□ 1.19
SMN2-210ENST00000511812 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
SMN2-210ENST00000511812 NEFMP07197 916 aa22.48■■□□□ 1.19
SMN2-210ENST00000511812 MAP3K5Q99683 1374 aa22.48■■□□□ 1.19
SMN2-210ENST00000511812 PHF14O94880 888 aa22.47■■□□□ 1.19
SMN2-210ENST00000511812 ARXQ96QS3 562 aa22.47■■□□□ 1.19
SMN2-210ENST00000511812 SGIP1Q9BQI5 828 aa22.47■■□□□ 1.19
SMN2-210ENST00000511812 TUBGCP6Q96RT7 1819 aa22.47■■□□□ 1.19
SMN2-210ENST00000511812 GNPATO15228 680 aa22.46■■□□□ 1.19
SMN2-210ENST00000511812 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
SMN2-210ENST00000511812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.45■■□□□ 1.18
SMN2-210ENST00000511812 DCAF8L1A6NGE4 600 aa22.45■■□□□ 1.18
SMN2-210ENST00000511812 SSFA2P28290 1259 aa22.45■■□□□ 1.18
SMN2-210ENST00000511812 TEFQ10587 303 aa22.45■■□□□ 1.18
SMN2-210ENST00000511812 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.18
SMN2-210ENST00000511812 FHDC1Q9C0D6 1143 aaPredicted RBP22.43■■□□□ 1.18
SMN2-210ENST00000511812 RTCBQ9Y3I0 505 aaKnown RBP22.43■■□□□ 1.18
SMN2-210ENST00000511812 MRC1P22897 1456 aa22.42■■□□□ 1.18
SMN2-210ENST00000511812 SLC39A6Q13433 755 aa22.42■■□□□ 1.18
SMN2-210ENST00000511812 RC3H1Q5TC82 1133 aaKnown RBP22.42■■□□□ 1.18
SMN2-210ENST00000511812 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
SMN2-210ENST00000511812 TTC5Q8N0Z6 440 aa22.42■■□□□ 1.18
SMN2-210ENST00000511812 KLHL34Q8N239 644 aa22.42■■□□□ 1.18
SMN2-210ENST00000511812 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
SMN2-210ENST00000511812 PNNQ9H307 717 aaKnown RBP22.42■■□□□ 1.18
SMN2-210ENST00000511812 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
SMN2-210ENST00000511812 IL17REQ8NFR9 667 aa22.41■■□□□ 1.18
SMN2-210ENST00000511812 ZNF831Q5JPB2 1677 aa22.4■■□□□ 1.18
SMN2-210ENST00000511812 CNTNAP4Q9C0A0 1308 aa22.4■■□□□ 1.18
SMN2-210ENST00000511812 TRAPPC3LQ5T215 181 aa22.4■■□□□ 1.18
SMN2-210ENST00000511812 SYT17Q9BSW7 474 aa22.4■■□□□ 1.18
SMN2-210ENST00000511812 SMIM5Q71RC9 77 aa22.39■■□□□ 1.17
SMN2-210ENST00000511812 AMIGO3Q86WK7 504 aa22.39■■□□□ 1.17
SMN2-210ENST00000511812 ADAMTS7Q9UKP4 1686 aa22.39■■□□□ 1.17
SMN2-210ENST00000511812 UBR3Q6ZT12 1888 aa22.38■■□□□ 1.17
SMN2-210ENST00000511812 VIRMAQ69YN4 1812 aaKnown RBP22.38■■□□□ 1.17
SMN2-210ENST00000511812 RPS6KA4O75676 772 aa22.37■■□□□ 1.17
SMN2-210ENST00000511812 ADRA2BP18089 450 aa22.37■■□□□ 1.17
SMN2-210ENST00000511812 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
SMN2-210ENST00000511812 CRKLP46109 303 aaKnown RBP22.36■■□□□ 1.17
SMN2-210ENST00000511812 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
SMN2-210ENST00000511812 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
SMN2-210ENST00000511812 CEMIPQ8WUJ3 1361 aa22.35■■□□□ 1.17
SMN2-210ENST00000511812 BTBD11A6QL63 1104 aa22.34■■□□□ 1.17
SMN2-210ENST00000511812 RFC4P35249 363 aa22.34■■□□□ 1.17
SMN2-210ENST00000511812 ZNF790Q6PG37 636 aa22.34■■□□□ 1.17
SMN2-210ENST00000511812 VSIG10Q8N0Z9 540 aa22.34■■□□□ 1.17
SMN2-210ENST00000511812 MCM10Q7L590 875 aa22.33■■□□□ 1.17
SMN2-210ENST00000511812 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.17
SMN2-210ENST00000511812 PRKRIP1Q9H875 184 aaPredicted RBP22.33■■□□□ 1.17
SMN2-210ENST00000511812 COL5A3P25940 1745 aaPredicted RBP22.33■■□□□ 1.17
SMN2-210ENST00000511812 COL24A1Q17RW2 1714 aa22.32■■□□□ 1.16
SMN2-210ENST00000511812 ZNF316A6NFI3 1004 aaPredicted RBP22.32■■□□□ 1.16
SMN2-210ENST00000511812 CCDC87Q9NVE4 849 aa22.32■■□□□ 1.16
SMN2-210ENST00000511812 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
SMN2-210ENST00000511812 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
SMN2-210ENST00000511812 STARD3NLO95772 234 aa22.3■■□□□ 1.16
SMN2-210ENST00000511812 DCTN1Q14203 1278 aa22.3■■□□□ 1.16
SMN2-210ENST00000511812 WDR43Q15061 677 aaKnown RBP eCLIP22.3■■□□□ 1.16
SMN2-210ENST00000511812 NFE2L2Q16236 605 aa22.3■■□□□ 1.16
SMN2-210ENST00000511812 NLGN1Q8N2Q7 840 aa22.3■■□□□ 1.16
SMN2-210ENST00000511812 ZNF496Q96IT1 587 aaPredicted RBP22.3■■□□□ 1.16
SMN2-210ENST00000511812 FMNL2Q96PY5 1086 aa22.3■■□□□ 1.16
SMN2-210ENST00000511812 TEX13AQ9BXU3 409 aaPredicted RBP22.3■■□□□ 1.16
SMN2-210ENST00000511812 TJP1Q07157 1748 aa22.3■■□□□ 1.16
SMN2-210ENST00000511812 CICQ96RK0 1608 aaPredicted RBP22.29■■□□□ 1.16
SMN2-210ENST00000511812 CYP19A1P11511 503 aaPredicted RBP22.29■■□□□ 1.16
SMN2-210ENST00000511812 INTS5Q6P9B9 1019 aaKnown RBP22.29■■□□□ 1.16
SMN2-210ENST00000511812 HEG1Q9ULI3 1381 aa22.28■■□□□ 1.16
SMN2-210ENST00000511812 MYH14Q7Z406 1995 aaKnown RBP22.27■■□□□ 1.16
SMN2-210ENST00000511812 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
SMN2-210ENST00000511812 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
SMN2-210ENST00000511812 SIPA1L3O60292 1781 aaPredicted RBP22.25■■□□□ 1.15
SMN2-210ENST00000511812 ZPR1O75312 459 aa22.25■■□□□ 1.15
SMN2-210ENST00000511812 MMP10P09238 476 aa22.25■■□□□ 1.15
SMN2-210ENST00000511812 ZBTB1Q9Y2K1 713 aa22.25■■□□□ 1.15
SMN2-210ENST00000511812 UBR2Q8IWV8 1755 aa22.25■■□□□ 1.15
SMN2-210ENST00000511812 KCNQ3O43525 872 aa22.24■■□□□ 1.15
SMN2-210ENST00000511812 GYS1P13807 737 aa22.24■■□□□ 1.15
SMN2-210ENST00000511812 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
SMN2-210ENST00000511812 SOS1Q07889 1333 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms