RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NEFLP07196 543 aa11.85□□□□□ -0.51
NR1I3-228ENST00000511676 GPR162Q16538 588 aa11.85□□□□□ -0.51
NR1I3-228ENST00000511676 PROM2Q8N271 834 aa11.85□□□□□ -0.51
NR1I3-228ENST00000511676 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
NR1I3-228ENST00000511676 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
NR1I3-228ENST00000511676 NUP188Q5SRE5 1749 aa11.85□□□□□ -0.51
NR1I3-228ENST00000511676 HMOX1P09601 288 aa11.84□□□□□ -0.51
NR1I3-228ENST00000511676 RIPK4P57078 832 aa11.84□□□□□ -0.51
NR1I3-228ENST00000511676 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
NR1I3-228ENST00000511676 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-228ENST00000511676 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
NR1I3-228ENST00000511676 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
NR1I3-228ENST00000511676 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
NR1I3-228ENST00000511676 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
NR1I3-228ENST00000511676 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.52
NR1I3-228ENST00000511676 PTGER2P43116 358 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-228ENST00000511676 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-228ENST00000511676 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
NR1I3-228ENST00000511676 GNAI1P63096 354 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 SMARCC1Q92922 1105 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-228ENST00000511676 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-228ENST00000511676 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
NR1I3-228ENST00000511676 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 SBF2Q86WG5 1849 aa11.81□□□□□ -0.52
NR1I3-228ENST00000511676 TATP17735 454 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-228ENST00000511676 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
NR1I3-228ENST00000511676 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
NR1I3-228ENST00000511676 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
NR1I3-228ENST00000511676 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-228ENST00000511676 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
NR1I3-228ENST00000511676 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
NR1I3-228ENST00000511676 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
NR1I3-228ENST00000511676 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-228ENST00000511676 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
NR1I3-228ENST00000511676 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-228ENST00000511676 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-228ENST00000511676 PLEKHO1Q53GL0 409 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-228ENST00000511676 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
NR1I3-228ENST00000511676 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-228ENST00000511676 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-228ENST00000511676 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 PCDH11XQ9BZA7 1347 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 PCDH11YQ9BZA8 1340 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
NR1I3-228ENST00000511676 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
NR1I3-228ENST00000511676 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
NR1I3-228ENST00000511676 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
NR1I3-228ENST00000511676 C1QTNF8P60827 252 aa11.76□□□□□ -0.53
NR1I3-228ENST00000511676 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
NR1I3-228ENST00000511676 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
NR1I3-228ENST00000511676 LTV1Q96GA3 475 aaPredicted RBP11.76□□□□□ -0.53
NR1I3-228ENST00000511676 SPG7Q9UQ90 795 aa11.76□□□□□ -0.53
NR1I3-228ENST00000511676 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
NR1I3-228ENST00000511676 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
NR1I3-228ENST00000511676 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
NR1I3-228ENST00000511676 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
NR1I3-228ENST00000511676 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
NR1I3-228ENST00000511676 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
NR1I3-228ENST00000511676 CHL1O00533 1208 aa11.74□□□□□ -0.53
NR1I3-228ENST00000511676 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-228ENST00000511676 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
NR1I3-228ENST00000511676 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
NR1I3-228ENST00000511676 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
NR1I3-228ENST00000511676 CHD4Q14839 1912 aa11.73□□□□□ -0.53
NR1I3-228ENST00000511676 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NR1I3-228ENST00000511676 PTF1AQ7RTS3 328 aa11.73□□□□□ -0.53
NR1I3-228ENST00000511676 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
NR1I3-228ENST00000511676 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
NR1I3-228ENST00000511676 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
NR1I3-228ENST00000511676 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
NR1I3-228ENST00000511676 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
NR1I3-228ENST00000511676 AK7Q96M32 723 aa11.72□□□□□ -0.53
NR1I3-228ENST00000511676 MEGF6O75095 1541 aa11.71□□□□□ -0.53
NR1I3-228ENST00000511676 MRC1P22897 1456 aa11.71□□□□□ -0.53
NR1I3-228ENST00000511676 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
NR1I3-228ENST00000511676 AAMPQ13685 434 aa11.71□□□□□ -0.53
NR1I3-228ENST00000511676 FKBP8Q14318 412 aa11.71□□□□□ -0.53
NR1I3-228ENST00000511676 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-228ENST00000511676 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NR1I3-228ENST00000511676 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.53
NR1I3-228ENST00000511676 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-228ENST00000511676 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NR1I3-228ENST00000511676 MS4A1P11836 297 aa11.7□□□□□ -0.54
NR1I3-228ENST00000511676 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
NR1I3-228ENST00000511676 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-228ENST00000511676 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
NR1I3-228ENST00000511676 PNPLA7Q6ZV29 1317 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms