RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 NSD2O96028 1365 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 KRT32Q14532 448 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 HYPKQ9NX55 129 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 GLRX3O76003 335 aaKnown RBP10.71□□□□□ -0.7
NEK1-207ENST00000511633 CDKL5O76039 1030 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 IFIT1P09914 478 aaKnown RBP10.71□□□□□ -0.7
NEK1-207ENST00000511633 KRT85P78386 507 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 CAVIN4Q5BKX8 364 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.7
NEK1-207ENST00000511633 DDX11Q96FC9 970 aa10.71□□□□□ -0.7
NEK1-207ENST00000511633 FLIIQ13045 1269 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 FILIP1LQ4L180 1135 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.7□□□□□ -0.7
NEK1-207ENST00000511633 TNMDQ9H2S6 317 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 FAM13BQ9NYF5 915 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 MAP3K2Q9Y2U5 619 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 A0A087WZG4 1122 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 TRIM27P14373 513 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 ZSCAN31Q96LW9 406 aaPredicted RBP10.7□□□□□ -0.7
NEK1-207ENST00000511633 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
NEK1-207ENST00000511633 MPHOSPH10O00566 681 aaKnown RBP10.7□□□□□ -0.7
NEK1-207ENST00000511633 IFNL2Q8IZJ0 200 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 SPC24Q8NBT2 197 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 MINDY4BA8MYZ0 360 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 SPATA32Q96LK8 384 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
NEK1-207ENST00000511633 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
NEK1-207ENST00000511633 PTPRKQ15262 1439 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 USP5P45974 858 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 DUOX2Q9NRD8 1548 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 UGGT2Q9NYU1 1516 aa10.69□□□□□ -0.7
NEK1-207ENST00000511633 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 CAGE1Q8TC20 777 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 A2MP01023 1474 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 ANKRD36BQ8N2N9 1353 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 SERPINC1P01008 464 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
NEK1-207ENST00000511633 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
NEK1-207ENST00000511633 ANKRD18BA2A2Z9 1011 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 CCDC192P0DO97 292 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 HSP90AB2PQ58FF8 381 aa10.68□□□□□ -0.7
NEK1-207ENST00000511633 PTPRCP08575 1304 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 ITSN2Q9NZM3 1697 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
NEK1-207ENST00000511633 ANXA1P04083 346 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 SSBP05455 408 aaKnown RBP eCLIP10.67□□□□□ -0.7
NEK1-207ENST00000511633 CCDC83Q8IWF9 413 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 JARID2Q92833 1246 aaPredicted RBP10.67□□□□□ -0.7
NEK1-207ENST00000511633 SMARCE1Q969G3 411 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 DZIP1Q86YF9 867 aaKnown RBP10.67□□□□□ -0.7
NEK1-207ENST00000511633 TMOD2Q9NZR1 351 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
NEK1-207ENST00000511633 SLC5A1P13866 664 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 RPGRQ92834 1020 aaKnown RBP10.67□□□□□ -0.7
NEK1-207ENST00000511633 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
NEK1-207ENST00000511633 TEX14Q8IWB6 1497 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 MPNDQ8N594 471 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 DMRT2Q9Y5R5 561 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 PIP4K2AP48426 406 aaPredicted RBP10.66□□□□□ -0.7
NEK1-207ENST00000511633 NAPBQ9H115 298 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 MSH6P52701 1360 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 RIMS2Q9UQ26 1411 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 TRAPPC8Q9Y2L5 1435 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 WWC2Q6AWC2 1192 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 MKNK2Q9HBH9 465 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
NEK1-207ENST00000511633 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 ZNF76P36508 570 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 MAP3K12Q12852 859 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 FERMT3Q86UX7 667 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 CFAP45Q9UL16 551 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 STIM1Q13586 685 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 CRACR2BQ8N4Y2 399 aaPredicted RBP10.65□□□□□ -0.7
NEK1-207ENST00000511633 WASF1Q92558 559 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■■■■ 52.4
NEK1-207ENST00000511633 ARGLU1Q9NWB6 273 aaPredicted RBP10.65□□□□□ -0.7
NEK1-207ENST00000511633 UBE3BQ7Z3V4 1068 aa10.65□□□□□ -0.7
NEK1-207ENST00000511633 SYCP1Q15431 976 aa10.65□□□□□ -0.71
NEK1-207ENST00000511633 CWC25Q9NXE8 425 aaPredicted RBP10.65□□□□□ -0.71
NEK1-207ENST00000511633 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.71
NEK1-207ENST00000511633 DACH1Q9UI36 760 aa10.65□□□□□ -0.71
NEK1-207ENST00000511633 CTTNBP2Q8WZ74 1663 aa10.64□□□□□ -0.71
NEK1-207ENST00000511633 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
NEK1-207ENST00000511633 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
NEK1-207ENST00000511633 ZNF771Q7L3S4 317 aaPredicted RBP10.64□□□□□ -0.71
NEK1-207ENST00000511633 AK7Q96M32 723 aa10.64□□□□□ -0.71
NEK1-207ENST00000511633 TSHZ3Q63HK5 1081 aa10.64□□□□□ -0.71
NEK1-207ENST00000511633 PIK3R4Q99570 1358 aa10.64□□□□□ -0.71
NEK1-207ENST00000511633 RANBP6O60518 1105 aaKnown RBP10.64□□□□□ -0.71
NEK1-207ENST00000511633 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
NEK1-207ENST00000511633 CCDC173Q0VFZ6 552 aa10.64□□□□□ -0.71
NEK1-207ENST00000511633 CCDC82Q8N4S0 544 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms