RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
SUB1-209ENST00000511615 MCM10Q7L590 875 aa11.78□□□□□ -0.52
SUB1-209ENST00000511615 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
SUB1-209ENST00000511615 PRDM11Q9NQV5 511 aa11.78□□□□□ -0.52
SUB1-209ENST00000511615 COL22A1Q8NFW1 1626 aaPredicted RBP11.77□□□□□ -0.52
SUB1-209ENST00000511615 LTV1Q96GA3 475 aaPredicted RBP11.77□□□□□ -0.53
SUB1-209ENST00000511615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
SUB1-209ENST00000511615 LTN1O94822 1766 aa11.77□□□□□ -0.53
SUB1-209ENST00000511615 COL16A1Q07092 1604 aaPredicted RBP11.77□□□□□ -0.53
SUB1-209ENST00000511615 SOS1Q07889 1333 aaPredicted RBP11.76□□□□□ -0.53
SUB1-209ENST00000511615 CRB1P82279 1406 aa11.76□□□□□ -0.53
SUB1-209ENST00000511615 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
SUB1-209ENST00000511615 TSPYL4Q9UJ04 414 aa11.76□□□□□ -0.53
SUB1-209ENST00000511615 GSE1Q14687 1217 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
SUB1-209ENST00000511615 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 DLG5Q8TDM6 1919 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 HSCBQ8IWL3 235 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 ANKRD44Q8N8A2 993 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 DCTPP1Q9H773 170 aa11.75□□□□□ -0.53
SUB1-209ENST00000511615 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
SUB1-209ENST00000511615 JCADQ9P266 1359 aa11.74□□□□□ -0.53
SUB1-209ENST00000511615 HMMRO75330 724 aa11.74□□□□□ -0.53
SUB1-209ENST00000511615 RBM25P49756 843 aaKnown RBP11.74□□□□□ -0.53
SUB1-209ENST00000511615 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
SUB1-209ENST00000511615 CARD10Q9BWT7 1032 aa11.74□□□□□ -0.53
SUB1-209ENST00000511615 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
SUB1-209ENST00000511615 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
SUB1-209ENST00000511615 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 GNAT3A8MTJ3 354 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
SUB1-209ENST00000511615 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
SUB1-209ENST00000511615 CDC45O75419 566 aa11.72□□□□□ -0.53
SUB1-209ENST00000511615 FRAT2O75474 233 aaPredicted RBP11.72□□□□□ -0.53
SUB1-209ENST00000511615 COL5A2P05997 1499 aaPredicted RBP11.72□□□□□ -0.53
SUB1-209ENST00000511615 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 SNX21Q969T3 373 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 SLKQ9H2G2 1235 aaPredicted RBP11.71□□□□□ -0.53
SUB1-209ENST00000511615 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 PHLPP1O60346 1717 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.53
SUB1-209ENST00000511615 ANTXR1Q9H6X2 564 aa11.71□□□□□ -0.54
SUB1-209ENST00000511615 ABCA3Q99758 1704 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 CSB-PGBD3P0DP91 1061 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 CASC1Q6TDU7 716 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
SUB1-209ENST00000511615 RGS12O14924 1447 aa11.69□□□□□ -0.54
SUB1-209ENST00000511615 EVA1CP58658 441 aa11.69□□□□□ -0.54
SUB1-209ENST00000511615 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
SUB1-209ENST00000511615 AKAP4Q5JQC9 854 aa11.69□□□□□ -0.54
SUB1-209ENST00000511615 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
SUB1-209ENST00000511615 RAPGEF4Q8WZA2 1011 aa11.69□□□□□ -0.54
SUB1-209ENST00000511615 CEMIPQ8WUJ3 1361 aa11.69□□□□□ -0.54
SUB1-209ENST00000511615 SOCS7O14512 581 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 GNAI3P08754 354 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 TATP17735 454 aaPredicted RBP11.68□□□□□ -0.54
SUB1-209ENST00000511615 LARP1Q6PKG0 1096 aaKnown RBP11.68□□□□□ -0.54
SUB1-209ENST00000511615 TOM1L2Q6ZVM7 507 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 PLEKHM2Q8IWE5 1019 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
SUB1-209ENST00000511615 KCNA4P22459 653 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 HSPA1LP34931 641 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 TTC22Q5TAA0 569 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
SUB1-209ENST00000511615 FAM208AQ9UK61 1670 aaKnown RBP11.67□□□□□ -0.54
SUB1-209ENST00000511615 GNAI2P04899 355 aa11.67□□□□□ -0.54
SUB1-209ENST00000511615 COL14A1Q05707 1796 aaKnown RBP11.67□□□□□ -0.54
SUB1-209ENST00000511615 ATP10DQ9P241 1426 aa11.67□□□□□ -0.54
SUB1-209ENST00000511615 SLIT2O94813 1529 aa11.67□□□□□ -0.54
SUB1-209ENST00000511615 RGPD5Q99666 1765 aa11.66□□□□□ -0.54
SUB1-209ENST00000511615 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
SUB1-209ENST00000511615 SLC4A10Q6U841 1118 aa11.66□□□□□ -0.54
SUB1-209ENST00000511615 MEIS3Q99687 375 aa11.66□□□□□ -0.54
SUB1-209ENST00000511615 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
SUB1-209ENST00000511615 THRAP3Q9Y2W1 955 aaKnown RBP11.66□□□□□ -0.54
SUB1-209ENST00000511615 ADAMTS2O95450 1211 aa11.65□□□□□ -0.54
SUB1-209ENST00000511615 IL2RBP14784 551 aa11.65□□□□□ -0.54
SUB1-209ENST00000511615 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
SUB1-209ENST00000511615 OVOS2A0A0G2JMS6 1433 aa11.65□□□□□ -0.54
SUB1-209ENST00000511615 FLIIQ13045 1269 aa11.65□□□□□ -0.55
SUB1-209ENST00000511615 ZNF530Q6P9A1 599 aaPredicted RBP11.65□□□□□ -0.55
SUB1-209ENST00000511615 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.55
SUB1-209ENST00000511615 CDCA7Q9BWT1 371 aaPredicted RBP11.65□□□□□ -0.55
SUB1-209ENST00000511615 MEGF6O75095 1541 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 1322.1 ms