RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	CRB1	P82279	1406 aa		11.92	□□□□□ -0.5
IFT122-223	ENST00000511498	SOS1	Q07889	1333 aa	Predicted RBP	11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	HDAC1	Q13547	482 aa	Predicted RBP	11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	FAM98C	Q17RN3	349 aa	Known RBP	11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	MRPL50	Q8N5N7	158 aa	Known RBP	11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	RTF1	Q92541	710 aa	Known RBP	11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	API5	Q9BZZ5	524 aa	Known RBP	11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	PCNT	O95613	3336 aa		11.91	□□□□□ -0.5
IFT122-223	ENST00000511498	CHL1	O00533	1208 aa		11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	PAK3	O75914	559 aa	Predicted RBP	11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	IGHD	P01880	384 aa		11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	ESCO1	Q5FWF5	840 aa		11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	POTED	Q86YR6	584 aa		11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	DDRGK1	Q96HY6	314 aa		11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	IPO9	Q96P70	1041 aa	Known RBP	11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	THUMPD2	Q9BTF0	503 aa	Known RBP	11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	ANP32E	Q9BTT0	268 aa		11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	CCDC9	Q9Y3X0	531 aa	Known RBP	11.9	□□□□□ -0.5
IFT122-223	ENST00000511498	ABCC4	O15439	1325 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	SPATA31A3	Q5VYP0	1347 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	NCAPD2	Q15021	1401 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498		A0A0G2JS52	829 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	SOX12	O15370	315 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	XPC	Q01831	940 aa	Predicted RBP	11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	PSME1	Q06323	249 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	NBPF14	Q5TI25	921 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	EYA1	Q99502	592 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	BABAM1	Q9NWV8	329 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	TNN	Q9UQP3	1299 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	KDM3B	Q7LBC6	1761 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	MAP3K5	Q99683	1374 aa		11.89	□□□□□ -0.51
IFT122-223	ENST00000511498	USP19	O94966	1318 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	RGPD2	P0DJD1	1756 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	TMEM57	Q8N5G2	664 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	IP6K1	Q92551	441 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	PCDHB15	Q9Y5E8	787 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	PLEKHG2	Q9H7P9	1386 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	CRYBG1	Q9Y4K1	1723 aa		11.88	□□□□□ -0.51
IFT122-223	ENST00000511498	OVOS2	A0A0G2JMS6	1433 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	FAM83G	A6ND36	823 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	FOXO3	O43524	673 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	TRIM37	O94972	964 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	PTGER2	P43116	358 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	RGS3	P49796	1198 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	CNKSR2	Q8WXI2	1034 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	ZBTB40	Q9NUA8	1239 aa		11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	NOP58	Q9Y2X3	529 aa	Known RBP	11.87	□□□□□ -0.51
IFT122-223	ENST00000511498	PTPRC	P08575	1304 aa		11.86	□□□□□ -0.51
IFT122-223	ENST00000511498	APBA3	O96018	575 aa		11.86	□□□□□ -0.51
IFT122-223	ENST00000511498	MTHFSD	Q2M296	383 aa	Known RBP	11.86	□□□□□ -0.51
IFT122-223	ENST00000511498	C8orf34	Q49A92	452 aa		11.86	□□□□□ -0.51
IFT122-223	ENST00000511498	TSPYL6	Q8N831	410 aa		11.86	□□□□□ -0.51
IFT122-223	ENST00000511498	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	RGPD4	Q7Z3J3	1758 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	ADAMTS7	Q9UKP4	1686 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	GNAT3	A8MTJ3	354 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	DCTN1	Q14203	1278 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	SMC5	Q8IY18	1101 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	C8orf58	Q8NAV2	365 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	SYT17	Q9BSW7	474 aa		11.85	□□□□□ -0.51
IFT122-223	ENST00000511498	FAM196A	Q6ZSG2	479 aa		11.84	□□□□□ -0.51
IFT122-223	ENST00000511498	MCM10	Q7L590	875 aa		11.84	□□□□□ -0.51
IFT122-223	ENST00000511498	CHMP4A	Q9BY43	222 aa		11.84	□□□□□ -0.51
IFT122-223	ENST00000511498	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.84	□□□□□ -0.51
IFT122-223	ENST00000511498	PDZRN3	Q9UPQ7	1066 aa		11.84	□□□□□ -0.51
IFT122-223	ENST00000511498	TNS3	Q68CZ2	1445 aa		11.84	□□□□□ -0.51
IFT122-223	ENST00000511498	PXDNL	A1KZ92	1463 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	SIPA1L3	O60292	1781 aa	Predicted RBP	11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	RGPD5	Q99666	1765 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	HSPA6	P17066	643 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	NUTM2G	Q5VZR2	741 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	TSPYL4	Q9UJ04	414 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	SPATA31A5	Q5VU36	1347 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	SPATA31A7	Q8IWB4	1347 aa		11.83	□□□□□ -0.52
IFT122-223	ENST00000511498	GCC1	Q96CN9	775 aa		11.82	□□□□□ -0.52
IFT122-223	ENST00000511498	CEMIP	Q8WUJ3	1361 aa		11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	ZBTB7B	O15156	539 aa	Predicted RBP	11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	INTS3	Q68E01	1043 aa	Known RBP	11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	KRT28	Q7Z3Y7	464 aa		11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	ARHGEF25	Q86VW2	580 aa		11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	SKAP1	Q86WV1	359 aa		11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	PCDH10	Q9P2E7	1040 aa		11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	COL18A1	P39060	1754 aa		11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	COL14A1	Q05707	1796 aa	Known RBP	11.81	□□□□□ -0.52
IFT122-223	ENST00000511498	ELL2	O00472	640 aa	Predicted RBP	11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	GC	P02774	474 aa		11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	AMOT	Q4VCS5	1084 aa		11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	NPM2	Q86SE8	214 aa	Known RBP	11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	CABLES1	Q8TDN4	633 aa		11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	UPF2	Q9HAU5	1272 aa	Known RBP	11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	PKD1L3	Q7Z443	1732 aa		11.8	□□□□□ -0.52
IFT122-223	ENST00000511498	PRELP	P51888	382 aa		11.79	□□□□□ -0.52
IFT122-223	ENST00000511498	TAF7	Q15545	349 aa	Predicted RBP	11.79	□□□□□ -0.52
IFT122-223	ENST00000511498	STK31	Q9BXU1	1019 aa		11.79	□□□□□ -0.52
IFT122-223	ENST00000511498	PARP4	Q9UKK3	1724 aa	Known RBP	11.79	□□□□□ -0.52
IFT122-223	ENST00000511498	SCN11A	Q9UI33	1791 aa		11.79	□□□□□ -0.52
IFT122-223	ENST00000511498	HOXB7	P09629	217 aa		11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms