RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FBXO33Q7Z6M2 555 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 BCL2L13Q9BXK5 485 aa9.01□□□□□ -0.97
HMGB1P47-201ENST00000511281 CD2BP2O95400 341 aaKnown RBP9□□□□□ -0.97
HMGB1P47-201ENST00000511281 FSHRP23945 695 aa9□□□□□ -0.97
HMGB1P47-201ENST00000511281 NR5A1Q13285 461 aa9□□□□□ -0.97
HMGB1P47-201ENST00000511281 MTFR1Q15390 333 aa9□□□□□ -0.97
HMGB1P47-201ENST00000511281 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
HMGB1P47-201ENST00000511281 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
HMGB1P47-201ENST00000511281 ESF1Q9H501 851 aaKnown RBP9□□□□□ -0.97
HMGB1P47-201ENST00000511281 ETNK1Q9HBU6 452 aa9□□□□□ -0.97
HMGB1P47-201ENST00000511281 EIF4ENIF1Q9NRA8 985 aaKnown RBP9□□□□□ -0.97
HMGB1P47-201ENST00000511281 LGR5O75473 907 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 ADH1CP00326 375 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 CCDC116Q8IYX3 515 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 MKNK1Q9BUB5 465 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 TMPRSS4Q9NRS4 437 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
HMGB1P47-201ENST00000511281 FAM13AO94988 1023 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 MYT1Q01538 1121 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 PPP1R18Q6NYC8 613 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 RGL4Q8IZJ4 473 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 SCG3Q8WXD2 468 aaKnown RBP8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 MRRFQ96E11 262 aaKnown RBP8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 CYLDQ9NQC7 956 aa8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 SCHIP1Q9P0W5 487 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P47-201ENST00000511281 MAPK1P28482 360 aa8.97□□□□□ -0.97
HMGB1P47-201ENST00000511281 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P47-201ENST00000511281 ZSCAN29Q8IWY8 852 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P47-201ENST00000511281 GIPC2Q8TF65 315 aa8.97□□□□□ -0.97
HMGB1P47-201ENST00000511281 RBCK1Q9BYM8 510 aa8.97□□□□□ -0.97
HMGB1P47-201ENST00000511281 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P47-201ENST00000511281 WNT7AO00755 349 aa8.96□□□□□ -0.98
HMGB1P47-201ENST00000511281 ZNF326Q5BKZ1 582 aaKnown RBP8.96□□□□□ -0.98
HMGB1P47-201ENST00000511281 C2orf49Q9BVC5 232 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P47-201ENST00000511281 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMGB1P47-201ENST00000511281 HRH3Q9Y5N1 445 aa8.96□□□□□ -0.98
HMGB1P47-201ENST00000511281 TLL2Q9Y6L7 1015 aa8.96□□□□□ -0.98
HMGB1P47-201ENST00000511281 A6NJY4 79 aa8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 MTMR3Q13615 1198 aa8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 C16orf46Q6P387 395 aa8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 EMID1Q96A84 441 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 XAGE2Q96GT9 111 aa8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 CITED4Q96RK1 184 aa8.95□□□□□ -0.98
HMGB1P47-201ENST00000511281 A0A1W2PRU2 124 aa8.94□□□□□ -0.98
HMGB1P47-201ENST00000511281 STAU1O95793 577 aaKnown RBP8.94□□□□□ -0.98
HMGB1P47-201ENST00000511281 SMTNP53814 917 aa8.94□□□□□ -0.98
HMGB1P47-201ENST00000511281 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
HMGB1P47-201ENST00000511281 MYO19Q96H55 970 aa8.94□□□□□ -0.98
HMGB1P47-201ENST00000511281 EMILIN1Q9Y6C2 1016 aa8.94□□□□□ -0.98
HMGB1P47-201ENST00000511281 ADD1P35611 737 aaKnown RBP8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 PSMA6P60900 246 aaKnown RBP8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 NAA30Q147X3 362 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 PGPEP1Q9NXJ5 209 aa8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 SERTAD1Q9UHV2 236 aa8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 IQSEC3Q9UPP2 1182 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P47-201ENST00000511281 CDK2AP1O14519 115 aa8.92□□□□□ -0.98
HMGB1P47-201ENST00000511281 NR3C2P08235 984 aa8.92□□□□□ -0.98
HMGB1P47-201ENST00000511281 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
HMGB1P47-201ENST00000511281 SLC9A9Q8IVB4 645 aa8.92□□□□□ -0.98
HMGB1P47-201ENST00000511281 TNFRSF10BO14763 440 aa8.91□□□□□ -0.98
HMGB1P47-201ENST00000511281 PPP1R12BO60237 982 aaPredicted RBP8.91□□□□□ -0.98
HMGB1P47-201ENST00000511281 IL2RAP01589 272 aa8.91□□□□□ -0.98
HMGB1P47-201ENST00000511281 VTI1AQ96AJ9 217 aa8.91□□□□□ -0.98
HMGB1P47-201ENST00000511281 SAP130Q9H0E3 1048 aa8.91□□□□□ -0.98
HMGB1P47-201ENST00000511281 MPSTP25325 297 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 COX20Q5RI15 118 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 ALKBH2Q6NS38 261 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 ZNF295-AS1Q8N0V1 137 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 NBPF15Q8N660 670 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 RNF166Q96A37 237 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 ESYT1Q9BSJ8 1104 aa8.9□□□□□ -0.98
HMGB1P47-201ENST00000511281 TREHO43280 583 aa8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 NDUFB5O43674 189 aa8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 IGSF3O75054 1194 aa8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 IGHA2P01877 340 aa8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 ADH1AP07327 375 aa8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 FMR1Q06787 632 aaKnown RBP eCLIP8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 KDF1Q8NAX2 398 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 STIM2Q9P246 746 aa8.89□□□□□ -0.99
HMGB1P47-201ENST00000511281 CLN3Q13286 438 aa8.88□□□□□ -0.99
HMGB1P47-201ENST00000511281 DSC3Q14574 896 aa8.88□□□□□ -0.99
HMGB1P47-201ENST00000511281 Q6ZVU0 165 aa8.88□□□□□ -0.99
HMGB1P47-201ENST00000511281 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
HMGB1P47-201ENST00000511281 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P47-201ENST00000511281 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
HMGB1P47-201ENST00000511281 FZD6O60353 706 aa8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 TCF3P15923 654 aa8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 EIF1AXP47813 144 aaKnown RBP8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 TEAD4Q15561 434 aa8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 EAPPQ56P03 285 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 ABTB2Q8N961 1025 aa8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 CNKSR1Q969H4 720 aa8.87□□□□□ -0.99
HMGB1P47-201ENST00000511281 FAM129BQ96TA1 746 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms