RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
CLCN3-207ENST00000511092 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
CLCN3-207ENST00000511092 PNPLA7Q6ZV29 1317 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 PBX2P40425 430 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 BARGINQ6ZT62 677 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 DDX27Q96GQ7 796 aaKnown RBP9.92□□□□□ -0.82
CLCN3-207ENST00000511092 MCOLN1Q9GZU1 580 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 LHX6Q9UPM6 363 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 PIK3C2AO00443 1686 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 QRICH2Q9H0J4 1663 aa9.92□□□□□ -0.82
CLCN3-207ENST00000511092 BTAF1O14981 1849 aa9.91□□□□□ -0.82
CLCN3-207ENST00000511092 CNTNAP1P78357 1384 aa9.91□□□□□ -0.82
CLCN3-207ENST00000511092 IGSF1Q8N6C5 1336 aa9.91□□□□□ -0.82
CLCN3-207ENST00000511092 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.82
CLCN3-207ENST00000511092 NHSQ6T4R5 1651 aa9.9□□□□□ -0.82
CLCN3-207ENST00000511092 TBC1D12O60347 775 aa9.9□□□□□ -0.82
CLCN3-207ENST00000511092 GCC1Q96CN9 775 aa9.9□□□□□ -0.82
CLCN3-207ENST00000511092 N4BP2Q86UW6 1770 aaPredicted RBP9.9□□□□□ -0.82
CLCN3-207ENST00000511092 LTBP1Q14766 1721 aa9.9□□□□□ -0.83
CLCN3-207ENST00000511092 SSH2Q76I76 1423 aa9.9□□□□□ -0.83
CLCN3-207ENST00000511092 ARHGEF10O15013 1369 aa9.89□□□□□ -0.83
CLCN3-207ENST00000511092 CHRNA2Q15822 529 aa9.89□□□□□ -0.83
CLCN3-207ENST00000511092 IFT172Q9UG01 1749 aa9.89□□□□□ -0.83
CLCN3-207ENST00000511092 HFM1A2PYH4 1435 aa9.89□□□□□ -0.83
CLCN3-207ENST00000511092 VEGFBP49765 207 aa9.88□□□□□ -0.83
CLCN3-207ENST00000511092 MSL1Q68DK7 614 aa9.88□□□□□ -0.83
CLCN3-207ENST00000511092 SLC16A10Q8TF71 515 aa9.88□□□□□ -0.83
CLCN3-207ENST00000511092 NAIPQ13075 1403 aa9.88□□□□□ -0.83
CLCN3-207ENST00000511092 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
CLCN3-207ENST00000511092 MFSD10Q14728 455 aa9.87□□□□□ -0.83
CLCN3-207ENST00000511092 OXER1Q8TDS5 423 aa9.87□□□□□ -0.83
CLCN3-207ENST00000511092 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
CLCN3-207ENST00000511092 SBF1O95248 1867 aa9.87□□□□□ -0.83
CLCN3-207ENST00000511092 SBNO1A3KN83 1393 aa9.87□□□□□ -0.83
CLCN3-207ENST00000511092 KANK1Q14678 1352 aa9.87□□□□□ -0.83
CLCN3-207ENST00000511092 PRDM11Q9NQV5 511 aa9.86□□□□□ -0.83
CLCN3-207ENST00000511092 ERBINQ96RT1 1412 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLCN3-207ENST00000511092 LARP1Q6PKG0 1096 aaKnown RBP9.85□□□□□ -0.83
CLCN3-207ENST00000511092 LRRC4BQ9NT99 713 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 KIAA0232Q92628 1395 aa9.85□□□□□ -0.83
CLCN3-207ENST00000511092 LMO7Q8WWI1 1683 aa9.84□□□□□ -0.83
CLCN3-207ENST00000511092 POTEEQ6S8J3 1075 aa9.84□□□□□ -0.83
CLCN3-207ENST00000511092 TCP11L2Q8N4U5 519 aa9.84□□□□□ -0.83
CLCN3-207ENST00000511092 BRCA1P38398 1863 aaKnown RBP9.84□□□□□ -0.83
CLCN3-207ENST00000511092 THSD7BQ9C0I4 1608 aa9.84□□□□□ -0.83
CLCN3-207ENST00000511092 KAT6BQ8WYB5 2073 aa9.83□□□□□ -0.84
CLCN3-207ENST00000511092 UNC80Q8N2C7 3258 aa9.82□□□□□ -0.84
CLCN3-207ENST00000511092 RNF166Q96A37 237 aaPredicted RBP9.82□□□□□ -0.84
CLCN3-207ENST00000511092 PLEKHG2Q9H7P9 1386 aa9.82□□□□□ -0.84
CLCN3-207ENST00000511092 NRXN1Q9ULB1 1477 aa9.82□□□□□ -0.84
CLCN3-207ENST00000511092 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
CLCN3-207ENST00000511092 LAMB4A4D0S4 1761 aa9.81□□□□□ -0.84
CLCN3-207ENST00000511092 E9PCH4 1651 aa9.81□□□□□ -0.84
CLCN3-207ENST00000511092 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
CLCN3-207ENST00000511092 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
CLCN3-207ENST00000511092 MARCH10Q8NA82 808 aaPredicted RBP9.81□□□□□ -0.84
CLCN3-207ENST00000511092 CLTCL1P53675 1640 aa9.81□□□□□ -0.84
CLCN3-207ENST00000511092 TRPM1Q7Z4N2 1603 aa9.81□□□□□ -0.84
CLCN3-207ENST00000511092 C11orf95C9JLR9 678 aaPredicted RBP9.8□□□□□ -0.84
CLCN3-207ENST00000511092 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
CLCN3-207ENST00000511092 ARFGEF1Q9Y6D6 1849 aa9.79□□□□□ -0.84
CLCN3-207ENST00000511092 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
CLCN3-207ENST00000511092 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
CLCN3-207ENST00000511092 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
CLCN3-207ENST00000511092 WDR70Q9NW82 654 aa9.79□□□□□ -0.84
CLCN3-207ENST00000511092 RAPGEFL1Q9UHV5 662 aa9.79□□□□□ -0.84
CLCN3-207ENST00000511092 COL18A1P39060 1754 aa9.78□□□□□ -0.84
CLCN3-207ENST00000511092 PSME1Q06323 249 aa9.78□□□□□ -0.84
CLCN3-207ENST00000511092 DGKZQ13574 1117 aa9.78□□□□□ -0.84
CLCN3-207ENST00000511092 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
CLCN3-207ENST00000511092 BCL9O00512 1426 aa9.78□□□□□ -0.84
CLCN3-207ENST00000511092 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
CLCN3-207ENST00000511092 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.84
CLCN3-207ENST00000511092 USP54Q70EL1 1684 aa9.77□□□□□ -0.84
CLCN3-207ENST00000511092 MKI67P46013 3256 aaKnown RBP9.77□□□□□ -0.85
CLCN3-207ENST00000511092 KCNQ4P56696 695 aa9.76□□□□□ -0.85
CLCN3-207ENST00000511092 ARHGAP27Q6ZUM4 889 aa9.76□□□□□ -0.85
CLCN3-207ENST00000511092 COL25A1Q9BXS0 654 aaPredicted RBP9.76□□□□□ -0.85
CLCN3-207ENST00000511092 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
CLCN3-207ENST00000511092 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
CLCN3-207ENST00000511092 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
CLCN3-207ENST00000511092 CCDC88AQ3V6T2 1871 aa9.75□□□□□ -0.85
CLCN3-207ENST00000511092 TFCP2L1Q9NZI6 479 aa9.75□□□□□ -0.85
CLCN3-207ENST00000511092 TK2O00142 265 aa9.74□□□□□ -0.85
CLCN3-207ENST00000511092 EVI5O60447 810 aa9.74□□□□□ -0.85
CLCN3-207ENST00000511092 EVA1CP58658 441 aa9.74□□□□□ -0.85
CLCN3-207ENST00000511092 CAMK2BQ13554 666 aa9.74□□□□□ -0.85
CLCN3-207ENST00000511092 DDB1Q16531 1140 aa9.74□□□□□ -0.85
CLCN3-207ENST00000511092 COL23A1Q86Y22 540 aaPredicted RBP9.74□□□□□ -0.85
CLCN3-207ENST00000511092 CEP162Q5TB80 1403 aa9.73□□□□□ -0.85
CLCN3-207ENST00000511092 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
CLCN3-207ENST00000511092 NBPF15Q8N660 670 aa9.73□□□□□ -0.85
CLCN3-207ENST00000511092 SNX27Q96L92 541 aa9.73□□□□□ -0.85
CLCN3-207ENST00000511092 RRP7BPQ9NSQ0 103 aa9.73□□□□□ -0.85
CLCN3-207ENST00000511092 BRD4O60885 1362 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms