RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
COPS4-208ENST00000510801 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
COPS4-208ENST00000510801 ZNF827Q17R98 1081 aa16.61■□□□□ 0.25
COPS4-208ENST00000510801 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
COPS4-208ENST00000510801 ZNF831Q5JPB2 1677 aa16.6■□□□□ 0.25
COPS4-208ENST00000510801 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
COPS4-208ENST00000510801 NFATC2IPQ8NCF5 419 aa16.6■□□□□ 0.25
COPS4-208ENST00000510801 SLC16A10Q8TF71 515 aa16.6■□□□□ 0.25
COPS4-208ENST00000510801 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
COPS4-208ENST00000510801 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
COPS4-208ENST00000510801 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
COPS4-208ENST00000510801 KAT6BQ8WYB5 2073 aa16.59■□□□□ 0.25
COPS4-208ENST00000510801 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
COPS4-208ENST00000510801 IL17REQ8NFR9 667 aa16.58■□□□□ 0.24
COPS4-208ENST00000510801 SPON1Q9HCB6 807 aa16.58■□□□□ 0.24
COPS4-208ENST00000510801 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
COPS4-208ENST00000510801 QSER1Q2KHR3 1735 aa16.57■□□□□ 0.24
COPS4-208ENST00000510801 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
COPS4-208ENST00000510801 MTFR1LQ9H019 292 aa16.57■□□□□ 0.24
COPS4-208ENST00000510801 KCNQ4P56696 695 aa16.56■□□□□ 0.24
COPS4-208ENST00000510801 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
COPS4-208ENST00000510801 SLC4A9Q96Q91 983 aa16.56■□□□□ 0.24
COPS4-208ENST00000510801 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
COPS4-208ENST00000510801 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
COPS4-208ENST00000510801 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
COPS4-208ENST00000510801 ITPK1Q13572 414 aa16.55■□□□□ 0.24
COPS4-208ENST00000510801 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
COPS4-208ENST00000510801 NEFMP07197 916 aa16.54■□□□□ 0.24
COPS4-208ENST00000510801 SSFA2P28290 1259 aa16.54■□□□□ 0.24
COPS4-208ENST00000510801 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
COPS4-208ENST00000510801 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
COPS4-208ENST00000510801 PDGFDQ9GZP0 370 aaPredicted RBP16.54■□□□□ 0.24
COPS4-208ENST00000510801 C5P01031 1676 aa16.53■□□□□ 0.24
COPS4-208ENST00000510801 CNTNAP4Q9C0A0 1308 aa16.53■□□□□ 0.24
COPS4-208ENST00000510801 PTGER2P43116 358 aa16.53■□□□□ 0.24
COPS4-208ENST00000510801 TEFQ10587 303 aa16.52■□□□□ 0.24
COPS4-208ENST00000510801 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
COPS4-208ENST00000510801 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
COPS4-208ENST00000510801 C4BP0C0L5 1744 aa16.52■□□□□ 0.24
COPS4-208ENST00000510801 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
COPS4-208ENST00000510801 AK7Q96M32 723 aa16.51■□□□□ 0.23
COPS4-208ENST00000510801 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
COPS4-208ENST00000510801 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
COPS4-208ENST00000510801 COL23A1Q86Y22 540 aaPredicted RBP16.5■□□□□ 0.23
COPS4-208ENST00000510801 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
COPS4-208ENST00000510801 PTCD1O75127 700 aaKnown RBP16.49■□□□□ 0.23
COPS4-208ENST00000510801 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
COPS4-208ENST00000510801 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
COPS4-208ENST00000510801 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
COPS4-208ENST00000510801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
COPS4-208ENST00000510801 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
COPS4-208ENST00000510801 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
COPS4-208ENST00000510801 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
COPS4-208ENST00000510801 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
COPS4-208ENST00000510801 TEX13AQ9BXU3 409 aaPredicted RBP16.47■□□□□ 0.23
COPS4-208ENST00000510801 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.23
COPS4-208ENST00000510801 COL5A3P25940 1745 aaPredicted RBP16.46■□□□□ 0.23
COPS4-208ENST00000510801 ANP32CO43423 234 aa16.46■□□□□ 0.23
COPS4-208ENST00000510801 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
COPS4-208ENST00000510801 MCM10Q7L590 875 aa16.46■□□□□ 0.23
COPS4-208ENST00000510801 AMIGO3Q86WK7 504 aa16.46■□□□□ 0.23
COPS4-208ENST00000510801 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
COPS4-208ENST00000510801 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
COPS4-208ENST00000510801 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
COPS4-208ENST00000510801 UBR2Q8IWV8 1755 aa16.46■□□□□ 0.22
COPS4-208ENST00000510801 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
COPS4-208ENST00000510801 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
COPS4-208ENST00000510801 GNPATO15228 680 aa16.45■□□□□ 0.22
COPS4-208ENST00000510801 CYP19A1P11511 503 aaPredicted RBP16.45■□□□□ 0.22
COPS4-208ENST00000510801 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
COPS4-208ENST00000510801 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
COPS4-208ENST00000510801 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
COPS4-208ENST00000510801 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
COPS4-208ENST00000510801 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
COPS4-208ENST00000510801 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
COPS4-208ENST00000510801 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
COPS4-208ENST00000510801 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
COPS4-208ENST00000510801 UBR3Q6ZT12 1888 aa16.44■□□□□ 0.22
COPS4-208ENST00000510801 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
COPS4-208ENST00000510801 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
COPS4-208ENST00000510801 POLD1P28340 1107 aa16.43■□□□□ 0.22
COPS4-208ENST00000510801 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
COPS4-208ENST00000510801 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
COPS4-208ENST00000510801 TJP1Q07157 1748 aa16.42■□□□□ 0.22
COPS4-208ENST00000510801 STARD3NLO95772 234 aa16.42■□□□□ 0.22
COPS4-208ENST00000510801 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
COPS4-208ENST00000510801 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
COPS4-208ENST00000510801 ARXQ96QS3 562 aa16.42■□□□□ 0.22
COPS4-208ENST00000510801 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
COPS4-208ENST00000510801 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
COPS4-208ENST00000510801 RIPK4P57078 832 aa16.41■□□□□ 0.22
COPS4-208ENST00000510801 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
COPS4-208ENST00000510801 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
COPS4-208ENST00000510801 SOS1Q07889 1333 aaPredicted RBP16.41■□□□□ 0.22
COPS4-208ENST00000510801 NLGN1Q8N2Q7 840 aa16.39■□□□□ 0.21
COPS4-208ENST00000510801 KCNQ3O43525 872 aa16.38■□□□□ 0.21
COPS4-208ENST00000510801 PHF14O94880 888 aa16.38■□□□□ 0.21
COPS4-208ENST00000510801 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
COPS4-208ENST00000510801 TRIM35Q9UPQ4 493 aa16.38■□□□□ 0.21
COPS4-208ENST00000510801 MYH14Q7Z406 1995 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms