RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 PAPPAQ13219 1627 aa25.6■■□□□ 1.69
CCND3-212ENST00000510058 BAG6P46379 1132 aa25.6■■□□□ 1.69
CCND3-212ENST00000510058 CALD1Q05682 793 aaKnown RBP25.6■■□□□ 1.69
CCND3-212ENST00000510058 NFATC2IPQ8NCF5 419 aa25.6■■□□□ 1.69
CCND3-212ENST00000510058 PIGBQ92521 554 aa25.6■■□□□ 1.69
CCND3-212ENST00000510058 SMARCC1Q92922 1105 aaPredicted RBP25.6■■□□□ 1.69
CCND3-212ENST00000510058 PLSCR1O15162 318 aa25.59■■□□□ 1.69
CCND3-212ENST00000510058 APBA3O96018 575 aa25.59■■□□□ 1.69
CCND3-212ENST00000510058 TRIM35Q9UPQ4 493 aa25.59■■□□□ 1.69
CCND3-212ENST00000510058 LY75O60449 1722 aa25.58■■□□□ 1.69
CCND3-212ENST00000510058 DCTN1Q14203 1278 aa25.57■■□□□ 1.68
CCND3-212ENST00000510058 TAF7Q15545 349 aaPredicted RBP25.55■■□□□ 1.68
CCND3-212ENST00000510058 PTF1AQ7RTS3 328 aa25.55■■□□□ 1.68
CCND3-212ENST00000510058 BABAM1Q9NWV8 329 aa25.55■■□□□ 1.68
CCND3-212ENST00000510058 HMGB2P26583 209 aaKnown RBP25.54■■□□□ 1.68
CCND3-212ENST00000510058 ZNF831Q5JPB2 1677 aa25.54■■□□□ 1.68
CCND3-212ENST00000510058 PALLDQ8WX93 1383 aa25.54■■□□□ 1.68
CCND3-212ENST00000510058 UBR2Q8IWV8 1755 aa25.54■■□□□ 1.68
CCND3-212ENST00000510058 SOCS7O14512 581 aa25.53■■□□□ 1.68
CCND3-212ENST00000510058 KDM3BQ7LBC6 1761 aa25.52■■□□□ 1.68
CCND3-212ENST00000510058 BTBD11A6QL63 1104 aa25.52■■□□□ 1.68
CCND3-212ENST00000510058 ATG3Q9NT62 314 aa25.52■■□□□ 1.68
CCND3-212ENST00000510058 WWC1Q8IX03 1113 aa25.51■■□□□ 1.67
CCND3-212ENST00000510058 TTC5Q8N0Z6 440 aa25.51■■□□□ 1.67
CCND3-212ENST00000510058 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
CCND3-212ENST00000510058 RREB1Q92766 1687 aa25.51■■□□□ 1.67
CCND3-212ENST00000510058 CICQ96RK0 1608 aaPredicted RBP25.5■■□□□ 1.67
CCND3-212ENST00000510058 ASAP1Q9ULH1 1129 aa25.5■■□□□ 1.67
CCND3-212ENST00000510058 SLC27A3Q5K4L6 730 aa25.49■■□□□ 1.67
CCND3-212ENST00000510058 ZNF790Q6PG37 636 aa25.49■■□□□ 1.67
CCND3-212ENST00000510058 WDR63Q8IWG1 891 aa25.49■■□□□ 1.67
CCND3-212ENST00000510058 IL16Q14005 1332 aa25.48■■□□□ 1.67
CCND3-212ENST00000510058 EN1Q05925 392 aaPredicted RBP25.47■■□□□ 1.67
CCND3-212ENST00000510058 CFAP44Q96MT7 982 aa25.47■■□□□ 1.67
CCND3-212ENST00000510058 CAMKK2Q96RR4 588 aa25.47■■□□□ 1.67
CCND3-212ENST00000510058 IFT57Q9NWB7 429 aa25.47■■□□□ 1.67
CCND3-212ENST00000510058 KCPQ6ZWJ8 1503 aa25.47■■□□□ 1.67
CCND3-212ENST00000510058 GNAI1P63096 354 aa25.46■■□□□ 1.67
CCND3-212ENST00000510058 DEFB132Q7Z7B7 95 aa25.46■■□□□ 1.67
CCND3-212ENST00000510058 TSPYL4Q9UJ04 414 aa25.45■■□□□ 1.66
CCND3-212ENST00000510058 SALL2Q9Y467 1007 aaPredicted RBP25.45■■□□□ 1.66
CCND3-212ENST00000510058 LOC102724428A0A0B4J2F2 783 aa25.44■■□□□ 1.66
CCND3-212ENST00000510058 SIK1P57059 783 aa25.44■■□□□ 1.66
CCND3-212ENST00000510058 SLC39A6Q13433 755 aa25.44■■□□□ 1.66
CCND3-212ENST00000510058 TXNRD1Q16881 649 aa25.44■■□□□ 1.66
CCND3-212ENST00000510058 VSIG10Q8N0Z9 540 aa25.44■■□□□ 1.66
CCND3-212ENST00000510058 CCNL1Q9UK58 526 aaPredicted RBP25.44■■□□□ 1.66
CCND3-212ENST00000510058 NUP188Q5SRE5 1749 aa25.43■■□□□ 1.66
CCND3-212ENST00000510058 ZNF521Q96K83 1311 aa25.43■■□□□ 1.66
CCND3-212ENST00000510058 TAF1LQ8IZX4 1826 aa25.43■■□□□ 1.66
CCND3-212ENST00000510058 CHL1O00533 1208 aa25.43■■□□□ 1.66
CCND3-212ENST00000510058 EZH2Q15910 746 aaKnown RBP25.43■■□□□ 1.66
CCND3-212ENST00000510058 FMNL2Q96PY5 1086 aa25.43■■□□□ 1.66
CCND3-212ENST00000510058 C5P01031 1676 aa25.42■■□□□ 1.66
CCND3-212ENST00000510058 ZNF853P0CG23 659 aa25.42■■□□□ 1.66
CCND3-212ENST00000510058 RBM42Q9BTD8 480 aaKnown RBP25.42■■□□□ 1.66
CCND3-212ENST00000510058 SENP3-EIF4A1A0A087X0R7 540 aa25.41■■□□□ 1.66
CCND3-212ENST00000510058 HNRNPUQ00839 825 aaKnown RBP eCLIP25.41■■□□□ 1.66
CCND3-212ENST00000510058 PTCD1O75127 700 aaKnown RBP25.4■■□□□ 1.66
CCND3-212ENST00000510058 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
CCND3-212ENST00000510058 HEG1Q9ULI3 1381 aa25.4■■□□□ 1.66
CCND3-212ENST00000510058 COL5A3P25940 1745 aaPredicted RBP25.4■■□□□ 1.66
CCND3-212ENST00000510058 TJP1Q07157 1748 aa25.4■■□□□ 1.66
CCND3-212ENST00000510058 ATP6V1AP38606 617 aa25.39■■□□□ 1.66
CCND3-212ENST00000510058 PROM2Q8N271 834 aa25.39■■□□□ 1.66
CCND3-212ENST00000510058 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.66
CCND3-212ENST00000510058 TEX13AQ9BXU3 409 aaPredicted RBP25.39■■□□□ 1.66
CCND3-212ENST00000510058 MIS18AQ9NYP9 233 aa25.38■■□□□ 1.65
CCND3-212ENST00000510058 LAMB4A4D0S4 1761 aa25.38■■□□□ 1.65
CCND3-212ENST00000510058 GOLGA2Q08379 1002 aa25.37■■□□□ 1.65
CCND3-212ENST00000510058 MYH16Q9H6N6 1097 aa25.37■■□□□ 1.65
CCND3-212ENST00000510058 KCNQ3O43525 872 aa25.36■■□□□ 1.65
CCND3-212ENST00000510058 EIF4A1P60842 406 aaKnown RBP25.36■■□□□ 1.65
CCND3-212ENST00000510058 MBIPQ9NS73 344 aa25.36■■□□□ 1.65
CCND3-212ENST00000510058 SNRPA1P09661 255 aaKnown RBP25.35■■□□□ 1.65
CCND3-212ENST00000510058 LRRC4BQ9NT99 713 aa25.35■■□□□ 1.65
CCND3-212ENST00000510058 ZBED9Q6R2W3 1325 aa25.35■■□□□ 1.65
CCND3-212ENST00000510058 C4BP0C0L5 1744 aa25.34■■□□□ 1.65
CCND3-212ENST00000510058 SLC4A9Q96Q91 983 aa25.34■■□□□ 1.65
CCND3-212ENST00000510058 E9PSI1 815 aa25.33■■□□□ 1.65
CCND3-212ENST00000510058 SOS1Q07889 1333 aaPredicted RBP25.33■■□□□ 1.64
CCND3-212ENST00000510058 NBPF14Q5TI25 921 aa25.32■■□□□ 1.64
CCND3-212ENST00000510058 STARD3NLO95772 234 aa25.31■■□□□ 1.64
CCND3-212ENST00000510058 HOXB7P09629 217 aa25.31■■□□□ 1.64
CCND3-212ENST00000510058 ITPK1Q13572 414 aa25.31■■□□□ 1.64
CCND3-212ENST00000510058 CNTNAP4Q9C0A0 1308 aa25.31■■□□□ 1.64
CCND3-212ENST00000510058 QSER1Q2KHR3 1735 aa25.3■■□□□ 1.64
CCND3-212ENST00000510058 GIGYF1O75420 1035 aaPredicted RBP25.3■■□□□ 1.64
CCND3-212ENST00000510058 CHMP4AQ9BY43 222 aa25.3■■□□□ 1.64
CCND3-212ENST00000510058 FANCIQ9NVI1 1328 aa25.3■■□□□ 1.64
CCND3-212ENST00000510058 RC3H1Q5TC82 1133 aaKnown RBP25.29■■□□□ 1.64
CCND3-212ENST00000510058 DNAJC10Q8IXB1 793 aa25.29■■□□□ 1.64
CCND3-212ENST00000510058 KCNQ4P56696 695 aa25.28■■□□□ 1.64
CCND3-212ENST00000510058 LINC00116Q8NCU8 138 aa25.28■■□□□ 1.64
CCND3-212ENST00000510058 STK32BQ9NY57 414 aa25.28■■□□□ 1.64
CCND3-212ENST00000510058 SLFN5Q08AF3 891 aa25.27■■□□□ 1.64
CCND3-212ENST00000510058 TSR2Q969E8 191 aaKnown RBP25.27■■□□□ 1.64
CCND3-212ENST00000510058 CYP19A1P11511 503 aaPredicted RBP25.26■■□□□ 1.63
CCND3-212ENST00000510058 AK7Q96M32 723 aa25.26■■□□□ 1.63
CCND3-212ENST00000510058 AKT1S1Q96B36 256 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms