RNA–Protein interactions for RNA: ENST00000509925.5

PCDH7-204, Transcript of protocadherin 7, humanhuman

TSL 3

Gene PCDH7, Length 543 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-204ENST00000509925 NME9Q86XW9 330 aa11.92□□□□□ -0.5
PCDH7-204ENST00000509925 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
PCDH7-204ENST00000509925 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
PCDH7-204ENST00000509925 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
PCDH7-204ENST00000509925 LY75O60449 1722 aa11.9□□□□□ -0.5
PCDH7-204ENST00000509925 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
PCDH7-204ENST00000509925 SIN3AQ96ST3 1273 aa11.9□□□□□ -0.5
PCDH7-204ENST00000509925 MAP3K5Q99683 1374 aa11.9□□□□□ -0.5
PCDH7-204ENST00000509925 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
PCDH7-204ENST00000509925 NLGN2Q8NFZ4 835 aa11.89□□□□□ -0.51
PCDH7-204ENST00000509925 CD163L1Q9NR16 1453 aa11.89□□□□□ -0.51
PCDH7-204ENST00000509925 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
PCDH7-204ENST00000509925 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
PCDH7-204ENST00000509925 GIGYF1O75420 1035 aaPredicted RBP11.88□□□□□ -0.51
PCDH7-204ENST00000509925 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
PCDH7-204ENST00000509925 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
PCDH7-204ENST00000509925 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
PCDH7-204ENST00000509925 LTV1Q96GA3 475 aaPredicted RBP11.88□□□□□ -0.51
PCDH7-204ENST00000509925 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
PCDH7-204ENST00000509925 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
PCDH7-204ENST00000509925 POLD1P28340 1107 aa11.87□□□□□ -0.51
PCDH7-204ENST00000509925 TFCP2L1Q9NZI6 479 aa11.87□□□□□ -0.51
PCDH7-204ENST00000509925 SLC12A5Q9H2X9 1139 aa11.86□□□□□ -0.51
PCDH7-204ENST00000509925 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
PCDH7-204ENST00000509925 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
PCDH7-204ENST00000509925 SLC27A3Q5K4L6 730 aa11.85□□□□□ -0.51
PCDH7-204ENST00000509925 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
PCDH7-204ENST00000509925 TAF1LQ8IZX4 1826 aa11.84□□□□□ -0.51
PCDH7-204ENST00000509925 FBLN1P23142 703 aa11.84□□□□□ -0.51
PCDH7-204ENST00000509925 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
PCDH7-204ENST00000509925 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
PCDH7-204ENST00000509925 C5P01031 1676 aa11.84□□□□□ -0.51
PCDH7-204ENST00000509925 PSEN1P49768 467 aa11.83□□□□□ -0.52
PCDH7-204ENST00000509925 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
PCDH7-204ENST00000509925 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
PCDH7-204ENST00000509925 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
PCDH7-204ENST00000509925 NSD2O96028 1365 aa11.82□□□□□ -0.52
PCDH7-204ENST00000509925 IP6K1Q92551 441 aa11.82□□□□□ -0.52
PCDH7-204ENST00000509925 ITGB4P16144 1822 aa11.81□□□□□ -0.52
PCDH7-204ENST00000509925 ANKRD36BQ8N2N9 1353 aa11.81□□□□□ -0.52
PCDH7-204ENST00000509925 EMP3P54852 163 aa11.81□□□□□ -0.52
PCDH7-204ENST00000509925 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
PCDH7-204ENST00000509925 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
PCDH7-204ENST00000509925 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
PCDH7-204ENST00000509925 MEGF6O75095 1541 aa11.81□□□□□ -0.52
PCDH7-204ENST00000509925 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
PCDH7-204ENST00000509925 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
PCDH7-204ENST00000509925 TERF2IPQ9NYB0 399 aa11.8□□□□□ -0.52
PCDH7-204ENST00000509925 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
PCDH7-204ENST00000509925 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
PCDH7-204ENST00000509925 ATP10DQ9P241 1426 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 GRIN3BO60391 1043 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 HOXC9P31274 260 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 AMPHP49418 695 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
PCDH7-204ENST00000509925 ZNF526Q8TF50 670 aaPredicted RBP11.78□□□□□ -0.52
PCDH7-204ENST00000509925 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
PCDH7-204ENST00000509925 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 USP47Q96K76 1375 aa11.78□□□□□ -0.52
PCDH7-204ENST00000509925 UBR3Q6ZT12 1888 aa11.77□□□□□ -0.53
PCDH7-204ENST00000509925 COG3Q96JB2 828 aa11.77□□□□□ -0.53
PCDH7-204ENST00000509925 GOLGA2Q08379 1002 aa11.76□□□□□ -0.53
PCDH7-204ENST00000509925 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
PCDH7-204ENST00000509925 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
PCDH7-204ENST00000509925 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
PCDH7-204ENST00000509925 C4BP0C0L5 1744 aa11.75□□□□□ -0.53
PCDH7-204ENST00000509925 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
PCDH7-204ENST00000509925 NBPF6Q5VWK0 638 aa11.75□□□□□ -0.53
PCDH7-204ENST00000509925 SMIM5Q71RC9 77 aa11.75□□□□□ -0.53
PCDH7-204ENST00000509925 NBPF4Q96M43 638 aa11.75□□□□□ -0.53
PCDH7-204ENST00000509925 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
PCDH7-204ENST00000509925 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
PCDH7-204ENST00000509925 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
PCDH7-204ENST00000509925 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
PCDH7-204ENST00000509925 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
PCDH7-204ENST00000509925 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
PCDH7-204ENST00000509925 MPRIPQ6WCQ1 1025 aa11.73□□□□□ -0.53
PCDH7-204ENST00000509925 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
PCDH7-204ENST00000509925 RAPGEF4Q8WZA2 1011 aa11.73□□□□□ -0.53
PCDH7-204ENST00000509925 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
PCDH7-204ENST00000509925 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
PCDH7-204ENST00000509925 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
PCDH7-204ENST00000509925 CD2APQ9Y5K6 639 aa11.73□□□□□ -0.53
PCDH7-204ENST00000509925 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
PCDH7-204ENST00000509925 PALLDQ8WX93 1383 aa11.72□□□□□ -0.53
PCDH7-204ENST00000509925 PHF14O94880 888 aa11.72□□□□□ -0.53
PCDH7-204ENST00000509925 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
PCDH7-204ENST00000509925 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
PCDH7-204ENST00000509925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCDH7-204ENST00000509925 MAP2P11137 1827 aaKnown RBP11.71□□□□□ -0.54
PCDH7-204ENST00000509925 ADCY9O60503 1353 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 PKD1L3Q7Z443 1732 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 ST20-MTHFSA0A0A6YYL1 179 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 HSPA6P17066 643 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 AK7Q96M32 723 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 TESK2Q96S53 571 aa11.7□□□□□ -0.54
PCDH7-204ENST00000509925 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
PCDH7-204ENST00000509925 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms