RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ALDH1L2Q3SY69 923 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 USP6P35125 1406 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 SPATA31A3Q5VYP0 1347 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 SPATA31D1Q6ZQQ2 1576 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 SLC3A2P08195 630 aaKnown RBP6.27□□□□□ -1.41
PHF3-210ENST00000509876 WASHC4Q2M389 1173 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 AFF2P51816 1311 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 GNPATO15228 680 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 MTHFSDQ2M296 383 aaKnown RBP6.27□□□□□ -1.41
PHF3-210ENST00000509876 CWC25Q9NXE8 425 aaPredicted RBP6.27□□□□□ -1.41
PHF3-210ENST00000509876 TMOD2Q9NZR1 351 aa6.27□□□□□ -1.41
PHF3-210ENST00000509876 CDC5LQ99459 802 aaKnown RBP6.26□□□□□ -1.41
PHF3-210ENST00000509876 ZBTB3Q9H5J0 574 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 NCOA3Q9Y6Q9 1424 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 ANKRD18BA2A2Z9 1011 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 TRDNQ13061 729 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 CAVIN4Q5BKX8 364 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 NFATC2IPQ8NCF5 419 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 CARD10Q9BWT7 1032 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 CPS1P31327 1500 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 ZSCAN25Q6NSZ9 544 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 AEBP1Q8IUX7 1158 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 CARD14Q9BXL6 1004 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 TULP4Q9NRJ4 1543 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 ERICH2A1L162 156 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 TULP1O00294 542 aaPredicted RBP6.26□□□□□ -1.41
PHF3-210ENST00000509876 HSPA1LP34931 641 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 DNAAF4Q8WXU2 420 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 CEP126Q9P2H0 1117 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 AKAP2Q9Y2D5 859 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 NPC1L1Q9UHC9 1359 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 RBM6P78332 1123 aaKnown RBP6.26□□□□□ -1.41
PHF3-210ENST00000509876 IFIT5Q13325 482 aaKnown RBP6.26□□□□□ -1.41
PHF3-210ENST00000509876 DZIP3Q86Y13 1208 aaKnown RBP6.26□□□□□ -1.41
PHF3-210ENST00000509876 PTPRCP08575 1304 aa6.26□□□□□ -1.41
PHF3-210ENST00000509876 GPTP24298 496 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 AKAP17AQ02040 695 aaKnown RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 PANK1Q8TE04 598 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 ERVV-2B6SEH9 535 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 HIP1O00291 1037 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 ATF7IPQ6VMQ6 1270 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 METTL24Q5JXM2 366 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 RNF20Q5VTR2 975 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 CNTROBQ8N137 903 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 ZNF219Q9P2Y4 722 aaPredicted RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 KIF3AQ9Y496 699 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 FANCIQ9NVI1 1328 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 DNAJC2Q99543 621 aaKnown RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 UTP14AQ9BVJ6 771 aaKnown RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 WDR17Q8IZU2 1322 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 IFIT1P09914 478 aaKnown RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 PRIM1P49642 420 aaKnown RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 SLFN5Q08AF3 891 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 SLC39A6Q13433 755 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 PDE3AQ14432 1141 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 TPTE2Q6XPS3 522 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 CDCA7LQ96GN5 454 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 KIF24Q5T7B8 1368 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 C16orf71Q8IYS4 520 aaPredicted RBP6.25□□□□□ -1.41
PHF3-210ENST00000509876 SIL1Q9H173 461 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 MBIPQ9NS73 344 aa6.25□□□□□ -1.41
PHF3-210ENST00000509876 INSRP06213 1382 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 PARD3Q8TEW0 1356 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 FAM83GA6ND36 823 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 SEPT12Q8IYM1 358 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 BABAM1Q9NWV8 329 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 MAP3K2Q9Y2U5 619 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 FRMPD1Q5SYB0 1578 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 SOS1Q07889 1333 aaPredicted RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 SLC5A1P13866 664 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 ZKSCAN1P17029 563 aaPredicted RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 FSD1Q9BTV5 496 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 NIP7Q9Y221 180 aaKnown RBP eCLIP6.24□□□□□ -1.41
PHF3-210ENST00000509876 SETBP1Q9Y6X0 1596 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 BCORL1Q5H9F3 1711 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 C1orf167Q5SNV9 1468 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 GOLGA6L4A6NEF3 574 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 IL13P35225 146 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 NCBP3Q53F19 620 aaKnown RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 CCDC87Q9NVE4 849 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 SLF2Q8IX21 1173 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 SLC52A2Q9HAB3 445 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 DLC1Q96QB1 1528 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 SRGAP3O43295 1099 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 DHX16O60231 1041 aaKnown RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 ANKRD13DQ6ZTN6 518 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 CCAR1Q8IX12 1150 aaKnown RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 GCC1Q96CN9 775 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 RBM17Q96I25 401 aaKnown RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 NLRP3Q96P20 1036 aa6.24□□□□□ -1.41
PHF3-210ENST00000509876 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
PHF3-210ENST00000509876 WDHD1O75717 1129 aaPredicted RBP6.23□□□□□ -1.41
PHF3-210ENST00000509876 EXOC6Q8TAG9 804 aa6.23□□□□□ -1.41
PHF3-210ENST00000509876 AATKQ6ZMQ8 1374 aa6.23□□□□□ -1.41
PHF3-210ENST00000509876 C6orf229H3BNL8 230 aa6.23□□□□□ -1.41
PHF3-210ENST00000509876 REC8O95072 547 aa6.23□□□□□ -1.41
PHF3-210ENST00000509876 FLIIQ13045 1269 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms