RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 POU4F2Q12837 409 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 GAS6Q14393 721 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 WDR44Q5JSH3 913 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 NBPF10Q6P3W6 841 aaKnown RBP6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 NBPF15Q8N660 670 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 TRERF1Q96PN7 1200 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 GAS2L1Q99501 681 aaPredicted RBP6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 GRIP2Q9C0E4 1043 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 ENAMQ9NRM1 1142 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 MBIPQ9NS73 344 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 SPATA31C2B4DYI2 1134 aa6.94□□□□□ -1.3
SPARCL1-206ENST00000509407 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-206ENST00000509407 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPARCL1-206ENST00000509407 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
SPARCL1-206ENST00000509407 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
SPARCL1-206ENST00000509407 WASLO00401 505 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 GTF2E1P29083 439 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 GSK3AP49840 483 aa6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 DBN1Q16643 649 aa6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 FOXD4L4Q8WXT5 416 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 SCARF2Q96GP6 870 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 TIMMDC1Q9NPL8 285 aa6.93□□□□□ -1.3
SPARCL1-206ENST00000509407 GPR25O00155 361 aa6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 LYPD4Q6UWN0 246 aa6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 CNKSR1Q969H4 720 aa6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 RAB6BQ9NRW1 208 aa6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 NSFL1CQ9UNZ2 370 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
SPARCL1-206ENST00000509407 F11P03951 625 aa6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 ESCO1Q5FWF5 840 aa6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 KANK3Q6NY19 840 aa6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 CCDC85AQ96PX6 553 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 IGF1RP08069 1367 aa6.91□□□□□ -1.3
SPARCL1-206ENST00000509407 IRS1P35568 1242 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 CENPCQ03188 943 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 USP4Q13107 963 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 GNASQ5JWF2 1037 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 ZNF428Q96B54 188 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 ZSCAN10Q96SZ4 725 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 DOLKQ9UPQ8 538 aa6.9□□□□□ -1.3
SPARCL1-206ENST00000509407 IL2RAP01589 272 aa6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 ZNF326Q5BKZ1 582 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 CCDC82Q8N4S0 544 aa6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 SIRT1Q96EB6 747 aa6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 XAGE2Q96GT9 111 aa6.89□□□□□ -1.31
SPARCL1-206ENST00000509407 A0A1B0GTH6 734 aa6.88□□□□□ -1.31
SPARCL1-206ENST00000509407 BCRP11274 1271 aa6.88□□□□□ -1.31
SPARCL1-206ENST00000509407 MX2P20592 715 aa6.88□□□□□ -1.31
SPARCL1-206ENST00000509407 RNF135Q8IUD6 432 aa6.88□□□□□ -1.31
SPARCL1-206ENST00000509407 DNMT3AQ9Y6K1 912 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-206ENST00000509407 CLSTN1O94985 981 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 PHKA2P46019 1235 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 PGBD3Q8N328 593 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 PSMD1Q99460 953 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 LRRC4BQ9NT99 713 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 HRH3Q9Y5N1 445 aa6.87□□□□□ -1.31
SPARCL1-206ENST00000509407 PHF20L1A8MW92 1017 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 MAP2K3P46734 347 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 FOXK2Q01167 660 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 IRF5Q13568 498 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 LBRQ14739 615 aaKnown RBP6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 WASHC4Q2M389 1173 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 TICAM2Q86XR7 235 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 GZF1Q9H116 711 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 GPAMQ9HCL2 828 aa6.86□□□□□ -1.31
SPARCL1-206ENST00000509407 PPM1GO15355 546 aaPredicted RBP6.85□□□□□ -1.31
SPARCL1-206ENST00000509407 IGHA1P01876 353 aa6.85□□□□□ -1.31
SPARCL1-206ENST00000509407 VAC14Q08AM6 782 aa6.85□□□□□ -1.31
SPARCL1-206ENST00000509407 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
SPARCL1-206ENST00000509407 ACDQ96AP0 544 aa6.85□□□□□ -1.31
SPARCL1-206ENST00000509407 FHDC1Q9C0D6 1143 aaPredicted RBP6.85□□□□□ -1.31
SPARCL1-206ENST00000509407 ARID4BQ4LE39 1312 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 ABL2P42684 1182 aa6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 TLR1Q15399 786 aa6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 C4orf17Q53FE4 359 aa6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 BEND7Q8N7W2 519 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 GDPD2Q9HCC8 539 aa6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-206ENST00000509407 SOX11P35716 441 aa6.83□□□□□ -1.32
SPARCL1-206ENST00000509407 SEMA3FQ13275 785 aa6.83□□□□□ -1.32
SPARCL1-206ENST00000509407 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
SPARCL1-206ENST00000509407 EFHC2Q5JST6 749 aa6.83□□□□□ -1.32
SPARCL1-206ENST00000509407 GPAT2Q6NUI2 795 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms