RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 SIPA1L3O60292 1781 aaPredicted RBP18.62■□□□□ 0.57
SPOCK1-206ENST00000509293 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
SPOCK1-206ENST00000509293 KRT27Q7Z3Y8 459 aa18.61■□□□□ 0.57
SPOCK1-206ENST00000509293 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
SPOCK1-206ENST00000509293 MBIPQ9NS73 344 aa18.61■□□□□ 0.57
SPOCK1-206ENST00000509293 RGS12O14924 1447 aa18.6■□□□□ 0.57
SPOCK1-206ENST00000509293 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
SPOCK1-206ENST00000509293 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
SPOCK1-206ENST00000509293 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
SPOCK1-206ENST00000509293 TMOD3Q9NYL9 352 aa18.59■□□□□ 0.57
SPOCK1-206ENST00000509293 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
SPOCK1-206ENST00000509293 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
SPOCK1-206ENST00000509293 CT47B1P0C2W7 299 aaPredicted RBP18.58■□□□□ 0.56
SPOCK1-206ENST00000509293 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.56
SPOCK1-206ENST00000509293 SOS1Q07889 1333 aaPredicted RBP18.57■□□□□ 0.56
SPOCK1-206ENST00000509293 PIGBQ92521 554 aa18.57■□□□□ 0.56
SPOCK1-206ENST00000509293 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
SPOCK1-206ENST00000509293 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
SPOCK1-206ENST00000509293 PRIM1P49642 420 aaKnown RBP18.56■□□□□ 0.56
SPOCK1-206ENST00000509293 ZNF790Q6PG37 636 aa18.56■□□□□ 0.56
SPOCK1-206ENST00000509293 DOT1LQ8TEK3 1739 aa18.56■□□□□ 0.56
SPOCK1-206ENST00000509293 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
SPOCK1-206ENST00000509293 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
SPOCK1-206ENST00000509293 ITGB4P16144 1822 aa18.55■□□□□ 0.56
SPOCK1-206ENST00000509293 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
SPOCK1-206ENST00000509293 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
SPOCK1-206ENST00000509293 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
SPOCK1-206ENST00000509293 HOXB7P09629 217 aa18.53■□□□□ 0.56
SPOCK1-206ENST00000509293 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 NHSQ6T4R5 1651 aa18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 KAT6BQ8WYB5 2073 aa18.52■□□□□ 0.56
SPOCK1-206ENST00000509293 SMARCC1Q92922 1105 aaPredicted RBP18.51■□□□□ 0.55
SPOCK1-206ENST00000509293 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
SPOCK1-206ENST00000509293 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
SPOCK1-206ENST00000509293 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
SPOCK1-206ENST00000509293 KCNQ3O43525 872 aa18.5■□□□□ 0.55
SPOCK1-206ENST00000509293 KCNQ2O43526 872 aa18.5■□□□□ 0.55
SPOCK1-206ENST00000509293 SLC39A6Q13433 755 aa18.5■□□□□ 0.55
SPOCK1-206ENST00000509293 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
SPOCK1-206ENST00000509293 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
SPOCK1-206ENST00000509293 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 VAMP4O75379 141 aa18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 C8orf58Q8NAV2 365 aa18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 ASAP1Q9ULH1 1129 aa18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 UBR2Q8IWV8 1755 aa18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
SPOCK1-206ENST00000509293 GIGYF1O75420 1035 aaPredicted RBP18.48■□□□□ 0.55
SPOCK1-206ENST00000509293 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
SPOCK1-206ENST00000509293 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
SPOCK1-206ENST00000509293 SNRPA1P09661 255 aaKnown RBP18.46■□□□□ 0.55
SPOCK1-206ENST00000509293 KRT24Q2M2I5 525 aa18.45■□□□□ 0.54
SPOCK1-206ENST00000509293 ALDH1L2Q3SY69 923 aa18.45■□□□□ 0.54
SPOCK1-206ENST00000509293 TEX13AQ9BXU3 409 aaPredicted RBP18.45■□□□□ 0.54
SPOCK1-206ENST00000509293 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
SPOCK1-206ENST00000509293 PALLDQ8WX93 1383 aa18.44■□□□□ 0.54
SPOCK1-206ENST00000509293 BTAF1O14981 1849 aa18.44■□□□□ 0.54
SPOCK1-206ENST00000509293 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
SPOCK1-206ENST00000509293 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
SPOCK1-206ENST00000509293 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
SPOCK1-206ENST00000509293 PTF1AQ7RTS3 328 aa18.43■□□□□ 0.54
SPOCK1-206ENST00000509293 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
SPOCK1-206ENST00000509293 CICQ96RK0 1608 aaPredicted RBP18.42■□□□□ 0.54
SPOCK1-206ENST00000509293 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
SPOCK1-206ENST00000509293 TRIM37O94972 964 aa18.42■□□□□ 0.54
SPOCK1-206ENST00000509293 CCDC30Q5VVM6 783 aa18.42■□□□□ 0.54
SPOCK1-206ENST00000509293 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
SPOCK1-206ENST00000509293 SIK1P57059 783 aa18.41■□□□□ 0.54
SPOCK1-206ENST00000509293 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
SPOCK1-206ENST00000509293 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
SPOCK1-206ENST00000509293 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
SPOCK1-206ENST00000509293 ERBB4Q15303 1308 aa18.4■□□□□ 0.54
SPOCK1-206ENST00000509293 PLSCR1O15162 318 aa18.39■□□□□ 0.53
SPOCK1-206ENST00000509293 SSH1Q8WYL5 1049 aa18.39■□□□□ 0.53
SPOCK1-206ENST00000509293 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
SPOCK1-206ENST00000509293 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
SPOCK1-206ENST00000509293 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 STARD3NLO95772 234 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 STK31Q9BXU1 1019 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 C5P01031 1676 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 CACNA1FO60840 1977 aa18.37■□□□□ 0.53
SPOCK1-206ENST00000509293 LY75O60449 1722 aa18.36■□□□□ 0.53
SPOCK1-206ENST00000509293 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
SPOCK1-206ENST00000509293 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
SPOCK1-206ENST00000509293 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
SPOCK1-206ENST00000509293 MRPL50Q8N5N7 158 aaKnown RBP18.36■□□□□ 0.53
SPOCK1-206ENST00000509293 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
SPOCK1-206ENST00000509293 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
SPOCK1-206ENST00000509293 CYP19A1P11511 503 aaPredicted RBP18.35■□□□□ 0.53
SPOCK1-206ENST00000509293 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
SPOCK1-206ENST00000509293 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
SPOCK1-206ENST00000509293 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms