RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 KRT27Q7Z3Y8 459 aa8.19□□□□□ -1.1
RACK1-220ENST00000508963 TSR2Q969E8 191 aaKnown RBP8.19□□□□□ -1.1
RACK1-220ENST00000508963 WNK3Q9BYP7 1800 aa8.19□□□□□ -1.1
RACK1-220ENST00000508963 HEG1Q9ULI3 1381 aa8.19□□□□□ -1.1
RACK1-220ENST00000508963 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 BTBD11A6QL63 1104 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 VAMP4O75379 141 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 EIF4A1P60842 406 aaKnown RBP8.18□□□□□ -1.1
RACK1-220ENST00000508963 TEFQ10587 303 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 C8orf58Q8NAV2 365 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 MYH16Q9H6N6 1097 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 MRC1P22897 1456 aa8.18□□□□□ -1.1
RACK1-220ENST00000508963 EXOSC9Q06265 439 aaKnown RBP8.17□□□□□ -1.1
RACK1-220ENST00000508963 SLC39A6Q13433 755 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 ZNF790Q6PG37 636 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 FAM196AQ6ZSG2 479 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 TSPYL6Q8N831 410 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 ACSBG1Q96GR2 724 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 ASAP1Q9ULH1 1129 aa8.17□□□□□ -1.1
RACK1-220ENST00000508963 LAS1LQ9Y4W2 734 aaKnown RBP8.17□□□□□ -1.1
RACK1-220ENST00000508963 A0A0G2JS52 829 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 RGS12O14924 1447 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 MYT1Q01538 1121 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 KRT24Q2M2I5 525 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 TMOD3Q9NYL9 352 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 SCN11AQ9UI33 1791 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 TSPYL4Q9UJ04 414 aa8.16□□□□□ -1.1
RACK1-220ENST00000508963 GIGYF1O75420 1035 aaPredicted RBP8.15□□□□□ -1.1
RACK1-220ENST00000508963 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.1
RACK1-220ENST00000508963 BCL11BQ9C0K0 894 aaPredicted RBP8.15□□□□□ -1.1
RACK1-220ENST00000508963 SIPA1L3O60292 1781 aaPredicted RBP8.15□□□□□ -1.11
RACK1-220ENST00000508963 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.11
RACK1-220ENST00000508963 ELL2O00472 640 aaPredicted RBP8.14□□□□□ -1.11
RACK1-220ENST00000508963 CT47B1P0C2W7 299 aaPredicted RBP8.14□□□□□ -1.11
RACK1-220ENST00000508963 BRWD3Q6RI45 1802 aa8.13□□□□□ -1.11
RACK1-220ENST00000508963 SOS1Q07889 1333 aaPredicted RBP8.13□□□□□ -1.11
RACK1-220ENST00000508963 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
RACK1-220ENST00000508963 HOXB7P09629 217 aa8.13□□□□□ -1.11
RACK1-220ENST00000508963 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
RACK1-220ENST00000508963 TWISTNBQ3B726 338 aaPredicted RBP8.13□□□□□ -1.11
RACK1-220ENST00000508963 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
RACK1-220ENST00000508963 SYTL4Q96C24 671 aaPredicted RBP8.13□□□□□ -1.11
RACK1-220ENST00000508963 USP16Q9Y5T5 823 aa8.13□□□□□ -1.11
RACK1-220ENST00000508963 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
RACK1-220ENST00000508963 TRIM37O94972 964 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
RACK1-220ENST00000508963 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
RACK1-220ENST00000508963 PDIA6Q15084 440 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 PROM2Q8N271 834 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 SMARCC1Q92922 1105 aaPredicted RBP8.12□□□□□ -1.11
RACK1-220ENST00000508963 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 KCPQ6ZWJ8 1503 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 ITGB4P16144 1822 aa8.12□□□□□ -1.11
RACK1-220ENST00000508963 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 VIRMAQ69YN4 1812 aaKnown RBP8.11□□□□□ -1.11
RACK1-220ENST00000508963 PLSCR1O15162 318 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 BCAR3O75815 825 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 ALDH1L2Q3SY69 923 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 LRP10Q7Z4F1 713 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 SSH1Q8WYL5 1049 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 RCAN3Q9UKA8 241 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 KDM3BQ7LBC6 1761 aa8.11□□□□□ -1.11
RACK1-220ENST00000508963 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
RACK1-220ENST00000508963 CYP19A1P11511 503 aaPredicted RBP8.1□□□□□ -1.11
RACK1-220ENST00000508963 SIK1P57059 783 aa8.1□□□□□ -1.11
RACK1-220ENST00000508963 ITPK1Q13572 414 aa8.1□□□□□ -1.11
RACK1-220ENST00000508963 DNAJC10Q8IXB1 793 aa8.1□□□□□ -1.11
RACK1-220ENST00000508963 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
RACK1-220ENST00000508963 TEX13AQ9BXU3 409 aaPredicted RBP8.1□□□□□ -1.11
RACK1-220ENST00000508963 PAPPAQ13219 1627 aa8.1□□□□□ -1.11
RACK1-220ENST00000508963 SBF2Q86WG5 1849 aa8.1□□□□□ -1.11
RACK1-220ENST00000508963 DOT1LQ8TEK3 1739 aa8.09□□□□□ -1.11
RACK1-220ENST00000508963 NBPF26B4DH59 902 aa8.09□□□□□ -1.11
RACK1-220ENST00000508963 CENPBP07199 599 aaPredicted RBP8.09□□□□□ -1.11
RACK1-220ENST00000508963 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
RACK1-220ENST00000508963 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
RACK1-220ENST00000508963 INTS5Q6P9B9 1019 aaKnown RBP8.09□□□□□ -1.11
RACK1-220ENST00000508963 NBPF15Q8N660 670 aa8.09□□□□□ -1.11
RACK1-220ENST00000508963 RBM42Q9BTD8 480 aaKnown RBP8.09□□□□□ -1.11
RACK1-220ENST00000508963 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
RACK1-220ENST00000508963 PALLDQ8WX93 1383 aa8.09□□□□□ -1.12
RACK1-220ENST00000508963 NHSQ6T4R5 1651 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 UBR2Q8IWV8 1755 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 TCERG1O14776 1098 aaKnown RBP8.08□□□□□ -1.12
RACK1-220ENST00000508963 APBA3O96018 575 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 A1BGP04217 495 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 SLC4A2P04920 1241 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 EIF2S2P20042 333 aaKnown RBP8.08□□□□□ -1.12
RACK1-220ENST00000508963 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 KCNQ4P56696 695 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 HDGFL1Q5TGJ6 251 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 CCDC30Q5VVM6 783 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 G2E3Q7L622 706 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 CAMKK2Q96RR4 588 aa8.08□□□□□ -1.12
RACK1-220ENST00000508963 DDX21Q9NR30 783 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms