RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 MAP3K5Q99683 1374 aa14.09□□□□□ -0.15
POLR2J3-213ENST00000508848 SLC15A2Q16348 729 aa14.08□□□□□ -0.16
POLR2J3-213ENST00000508848 NFATC2IPQ8NCF5 419 aa14.08□□□□□ -0.16
POLR2J3-213ENST00000508848 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
POLR2J3-213ENST00000508848 PALLDQ8WX93 1383 aa14.08□□□□□ -0.16
POLR2J3-213ENST00000508848 IL17REQ8NFR9 667 aa14.07□□□□□ -0.16
POLR2J3-213ENST00000508848 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
POLR2J3-213ENST00000508848 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
POLR2J3-213ENST00000508848 ASAP1Q9ULH1 1129 aa14.07□□□□□ -0.16
POLR2J3-213ENST00000508848 CICQ96RK0 1608 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-213ENST00000508848 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 ANP32CO43423 234 aa14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 SIK1P57059 783 aa14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 SLC16A10Q8TF71 515 aa14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 STK32BQ9NY57 414 aa14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-213ENST00000508848 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
POLR2J3-213ENST00000508848 R3HDM1Q15032 1099 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-213ENST00000508848 RC3H1Q5TC82 1133 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-213ENST00000508848 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
POLR2J3-213ENST00000508848 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
POLR2J3-213ENST00000508848 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-213ENST00000508848 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-213ENST00000508848 C5P01031 1676 aa14.04□□□□□ -0.16
POLR2J3-213ENST00000508848 TEFQ10587 303 aa14.03□□□□□ -0.16
POLR2J3-213ENST00000508848 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
POLR2J3-213ENST00000508848 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
POLR2J3-213ENST00000508848 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-213ENST00000508848 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
POLR2J3-213ENST00000508848 CASZ1Q86V15 1759 aa14.02□□□□□ -0.16
POLR2J3-213ENST00000508848 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.16
POLR2J3-213ENST00000508848 LRP5O75197 1615 aa14.02□□□□□ -0.16
POLR2J3-213ENST00000508848 RUNDC1Q96C34 613 aa14.02□□□□□ -0.17
POLR2J3-213ENST00000508848 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
POLR2J3-213ENST00000508848 COL24A1Q17RW2 1714 aa14.01□□□□□ -0.17
POLR2J3-213ENST00000508848 MAPK8IP3Q9UPT6 1336 aa14.01□□□□□ -0.17
POLR2J3-213ENST00000508848 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
POLR2J3-213ENST00000508848 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
POLR2J3-213ENST00000508848 ATP6V1AP38606 617 aa14□□□□□ -0.17
POLR2J3-213ENST00000508848 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
POLR2J3-213ENST00000508848 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
POLR2J3-213ENST00000508848 ZNF790Q6PG37 636 aa14□□□□□ -0.17
POLR2J3-213ENST00000508848 PNISRQ8TF01 805 aaKnown RBP14□□□□□ -0.17
POLR2J3-213ENST00000508848 SLC4A9Q96Q91 983 aa14□□□□□ -0.17
POLR2J3-213ENST00000508848 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
POLR2J3-213ENST00000508848 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 CNTNAP4Q9C0A0 1308 aa13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 PSDA5PKW4 1024 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 SPON1Q9HCB6 807 aa13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-213ENST00000508848 SSFA2P28290 1259 aa13.98□□□□□ -0.17
POLR2J3-213ENST00000508848 ITPK1Q13572 414 aa13.98□□□□□ -0.17
POLR2J3-213ENST00000508848 MTFR1LQ9H019 292 aa13.98□□□□□ -0.17
POLR2J3-213ENST00000508848 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
POLR2J3-213ENST00000508848 TUBGCP6Q96RT7 1819 aa13.98□□□□□ -0.17
POLR2J3-213ENST00000508848 KCPQ6ZWJ8 1503 aa13.97□□□□□ -0.17
POLR2J3-213ENST00000508848 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
POLR2J3-213ENST00000508848 PNPLA7Q6ZV29 1317 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 BTBD11A6QL63 1104 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 RPS6KA4O75676 772 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 KCNQ4P56696 695 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 RIPK4P57078 832 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 LINC00116Q8NCU8 138 aa13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-213ENST00000508848 AK7Q96M32 723 aa13.95□□□□□ -0.18
POLR2J3-213ENST00000508848 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
POLR2J3-213ENST00000508848 TJP1Q07157 1748 aa13.95□□□□□ -0.18
POLR2J3-213ENST00000508848 STARD3NLO95772 234 aa13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 CYP19A1P11511 503 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 MCM10Q7L590 875 aa13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 COL23A1Q86Y22 540 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
POLR2J3-213ENST00000508848 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
POLR2J3-213ENST00000508848 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
POLR2J3-213ENST00000508848 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-213ENST00000508848 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
POLR2J3-213ENST00000508848 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 PTGER2P43116 358 aa13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 CRKLP46109 303 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 INTS5Q6P9B9 1019 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 PDGFDQ9GZP0 370 aaPredicted RBP13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
POLR2J3-213ENST00000508848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
POLR2J3-213ENST00000508848 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
POLR2J3-213ENST00000508848 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
POLR2J3-213ENST00000508848 DCTN1Q14203 1278 aa13.91□□□□□ -0.18
POLR2J3-213ENST00000508848 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
POLR2J3-213ENST00000508848 CCDC87Q9NVE4 849 aa13.91□□□□□ -0.18
POLR2J3-213ENST00000508848 CHL1O00533 1208 aa13.9□□□□□ -0.18
POLR2J3-213ENST00000508848 RGL2O15211 777 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms