RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 FCHSD2O94868 740 aa16.51■□□□□ 0.23
PTPN20-218ENST00000508357 ATG3Q9NT62 314 aa16.51■□□□□ 0.23
PTPN20-218ENST00000508357 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
PTPN20-218ENST00000508357 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 LRP5O75197 1615 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 CCDC184Q52MB2 194 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
PTPN20-218ENST00000508357 TJP1Q07157 1748 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 CEMIPQ8WUJ3 1361 aa16.5■□□□□ 0.23
PTPN20-218ENST00000508357 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
PTPN20-218ENST00000508357 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
PTPN20-218ENST00000508357 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
PTPN20-218ENST00000508357 SLC4A9Q96Q91 983 aa16.48■□□□□ 0.23
PTPN20-218ENST00000508357 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
PTPN20-218ENST00000508357 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
PTPN20-218ENST00000508357 CABP4P57796 275 aa16.47■□□□□ 0.23
PTPN20-218ENST00000508357 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
PTPN20-218ENST00000508357 NFATC2IPQ8NCF5 419 aa16.47■□□□□ 0.23
PTPN20-218ENST00000508357 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
PTPN20-218ENST00000508357 ITPK1Q13572 414 aa16.46■□□□□ 0.23
PTPN20-218ENST00000508357 SLC15A2Q16348 729 aa16.46■□□□□ 0.23
PTPN20-218ENST00000508357 SMARCC1Q92922 1105 aaPredicted RBP16.46■□□□□ 0.23
PTPN20-218ENST00000508357 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
PTPN20-218ENST00000508357 SIK1P57059 783 aa16.45■□□□□ 0.22
PTPN20-218ENST00000508357 STK32BQ9NY57 414 aa16.45■□□□□ 0.22
PTPN20-218ENST00000508357 UBR3Q6ZT12 1888 aa16.45■□□□□ 0.22
PTPN20-218ENST00000508357 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
PTPN20-218ENST00000508357 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
PTPN20-218ENST00000508357 SLC39A6Q13433 755 aa16.43■□□□□ 0.22
PTPN20-218ENST00000508357 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
PTPN20-218ENST00000508357 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
PTPN20-218ENST00000508357 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
PTPN20-218ENST00000508357 MCM10Q7L590 875 aa16.42■□□□□ 0.22
PTPN20-218ENST00000508357 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
PTPN20-218ENST00000508357 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
PTPN20-218ENST00000508357 ANP32CO43423 234 aa16.41■□□□□ 0.22
PTPN20-218ENST00000508357 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
PTPN20-218ENST00000508357 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
PTPN20-218ENST00000508357 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
PTPN20-218ENST00000508357 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN20-218ENST00000508357 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
PTPN20-218ENST00000508357 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
PTPN20-218ENST00000508357 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
PTPN20-218ENST00000508357 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
PTPN20-218ENST00000508357 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
PTPN20-218ENST00000508357 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
PTPN20-218ENST00000508357 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
PTPN20-218ENST00000508357 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
PTPN20-218ENST00000508357 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
PTPN20-218ENST00000508357 KCNQ3O43525 872 aa16.37■□□□□ 0.21
PTPN20-218ENST00000508357 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
PTPN20-218ENST00000508357 TEFQ10587 303 aa16.37■□□□□ 0.21
PTPN20-218ENST00000508357 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
PTPN20-218ENST00000508357 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
PTPN20-218ENST00000508357 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
PTPN20-218ENST00000508357 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
PTPN20-218ENST00000508357 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
PTPN20-218ENST00000508357 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
PTPN20-218ENST00000508357 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
PTPN20-218ENST00000508357 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
PTPN20-218ENST00000508357 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
PTPN20-218ENST00000508357 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
PTPN20-218ENST00000508357 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
PTPN20-218ENST00000508357 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
PTPN20-218ENST00000508357 MRS2Q9HD23 443 aa16.35■□□□□ 0.21
PTPN20-218ENST00000508357 NEFMP07197 916 aa16.34■□□□□ 0.21
PTPN20-218ENST00000508357 PTGER2P43116 358 aa16.34■□□□□ 0.21
PTPN20-218ENST00000508357 AK7Q96M32 723 aa16.34■□□□□ 0.21
PTPN20-218ENST00000508357 SGIP1Q9BQI5 828 aa16.34■□□□□ 0.21
PTPN20-218ENST00000508357 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
PTPN20-218ENST00000508357 GNPATO15228 680 aa16.33■□□□□ 0.2
PTPN20-218ENST00000508357 RIPK4P57078 832 aa16.33■□□□□ 0.2
PTPN20-218ENST00000508357 TRIM35Q9UPQ4 493 aa16.33■□□□□ 0.2
PTPN20-218ENST00000508357 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
PTPN20-218ENST00000508357 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
PTPN20-218ENST00000508357 PHF14O94880 888 aa16.32■□□□□ 0.2
PTPN20-218ENST00000508357 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
PTPN20-218ENST00000508357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
PTPN20-218ENST00000508357 CYP19A1P11511 503 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-218ENST00000508357 SSFA2P28290 1259 aa16.31■□□□□ 0.2
PTPN20-218ENST00000508357 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
PTPN20-218ENST00000508357 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
PTPN20-218ENST00000508357 TTC5Q8N0Z6 440 aa16.31■□□□□ 0.2
PTPN20-218ENST00000508357 MTFR1LQ9H019 292 aa16.31■□□□□ 0.2
PTPN20-218ENST00000508357 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
PTPN20-218ENST00000508357 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-218ENST00000508357 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
PTPN20-218ENST00000508357 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
PTPN20-218ENST00000508357 SPON1Q9HCB6 807 aa16.3■□□□□ 0.2
PTPN20-218ENST00000508357 APAF1O14727 1248 aa16.29■□□□□ 0.2
PTPN20-218ENST00000508357 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
PTPN20-218ENST00000508357 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
PTPN20-218ENST00000508357 ZBTB1Q9Y2K1 713 aa16.29■□□□□ 0.2
PTPN20-218ENST00000508357 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
PTPN20-218ENST00000508357 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
PTPN20-218ENST00000508357 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms