RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ANKRD26Q9UPS8 1709 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 FLT4P35916 1363 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 NCAPD2Q15021 1401 aa8.98□□□□□ -0.97
HMGN1P16-201ENST00000508308 TOGARAM1Q9Y4F4 1720 aa8.98□□□□□ -0.97
HMGN1P16-201ENST00000508308 CYP27B1O15528 508 aa8.98□□□□□ -0.97
HMGN1P16-201ENST00000508308 SYTL4Q96C24 671 aaPredicted RBP8.98□□□□□ -0.97
HMGN1P16-201ENST00000508308 CGNL1Q0VF96 1302 aa8.98□□□□□ -0.97
HMGN1P16-201ENST00000508308 KIF24Q5T7B8 1368 aa8.98□□□□□ -0.97
HMGN1P16-201ENST00000508308 MAP2P11137 1827 aaKnown RBP8.97□□□□□ -0.97
HMGN1P16-201ENST00000508308 POTEFA5A3E0 1075 aa8.97□□□□□ -0.97
HMGN1P16-201ENST00000508308 CDCA8Q53HL2 280 aa8.97□□□□□ -0.97
HMGN1P16-201ENST00000508308 ARXQ96QS3 562 aa8.97□□□□□ -0.97
HMGN1P16-201ENST00000508308 MAP3K5Q99683 1374 aa8.97□□□□□ -0.97
HMGN1P16-201ENST00000508308 PKD1L3Q7Z443 1732 aa8.97□□□□□ -0.97
HMGN1P16-201ENST00000508308 ITGB4P16144 1822 aa8.96□□□□□ -0.97
HMGN1P16-201ENST00000508308 RAPGEF4Q8WZA2 1011 aa8.96□□□□□ -0.98
HMGN1P16-201ENST00000508308 TAF1LQ8IZX4 1826 aa8.96□□□□□ -0.98
HMGN1P16-201ENST00000508308 SMG6Q86US8 1419 aaKnown RBP8.96□□□□□ -0.98
HMGN1P16-201ENST00000508308 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 PCGF6Q9BYE7 350 aa8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 TFCP2L1Q9NZI6 479 aa8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 POLKQ9UBT6 870 aa8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 CCNL1Q9UK58 526 aaPredicted RBP8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 WASHC2AQ641Q2 1341 aa8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
HMGN1P16-201ENST00000508308 C5P01031 1676 aa8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 NKX1-1Q15270 411 aaPredicted RBP8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 AMIGO3Q86WK7 504 aa8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 COL23A1Q86Y22 540 aaPredicted RBP8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 EYA1Q99502 592 aa8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 PCDH11XQ9BZA7 1347 aa8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 PCDH11YQ9BZA8 1340 aa8.94□□□□□ -0.98
HMGN1P16-201ENST00000508308 CHD4Q14839 1912 aa8.93□□□□□ -0.98
HMGN1P16-201ENST00000508308 MPRIPQ6WCQ1 1025 aa8.93□□□□□ -0.98
HMGN1P16-201ENST00000508308 PIGBQ92521 554 aa8.93□□□□□ -0.98
HMGN1P16-201ENST00000508308 MS4A3Q96HJ5 214 aa8.93□□□□□ -0.98
HMGN1P16-201ENST00000508308 PALLDQ8WX93 1383 aa8.92□□□□□ -0.98
HMGN1P16-201ENST00000508308 PPM1GO15355 546 aaPredicted RBP8.92□□□□□ -0.98
HMGN1P16-201ENST00000508308 HSPA5P11021 654 aaKnown RBP8.92□□□□□ -0.98
HMGN1P16-201ENST00000508308 SMIM5Q71RC9 77 aa8.92□□□□□ -0.98
HMGN1P16-201ENST00000508308 ZNF784Q8NCA9 323 aaPredicted RBP8.92□□□□□ -0.98
HMGN1P16-201ENST00000508308 NLGN2Q8NFZ4 835 aa8.92□□□□□ -0.98
HMGN1P16-201ENST00000508308 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
HMGN1P16-201ENST00000508308 EIF4A2Q14240 407 aaKnown RBP8.91□□□□□ -0.98
HMGN1P16-201ENST00000508308 UBR3Q6ZT12 1888 aa8.91□□□□□ -0.98
HMGN1P16-201ENST00000508308 C4BP0C0L5 1744 aa8.91□□□□□ -0.98
HMGN1P16-201ENST00000508308 ATXN8OSP0DMR3 200 aa8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 PHKG2P15735 406 aa8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 POLD1P28340 1107 aa8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 ATN1P54259 1190 aaPredicted RBP8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 EIF4G2P78344 907 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 PANK3Q9H999 370 aa8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMGN1P16-201ENST00000508308 YBX3P16989 372 aaKnown RBP eCLIP8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 ITPK1Q13572 414 aa8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 LINC00116Q8NCU8 138 aa8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 POLR3GLQ9BT43 218 aa8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 ASAP1Q9ULH1 1129 aa8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 SPG7Q9UQ90 795 aa8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 CEP350Q5VT06 3117 aa8.89□□□□□ -0.99
HMGN1P16-201ENST00000508308 IGSF1Q8N6C5 1336 aa8.88□□□□□ -0.99
HMGN1P16-201ENST00000508308 GPR162Q16538 588 aa8.88□□□□□ -0.99
HMGN1P16-201ENST00000508308 KLHL34Q8N239 644 aa8.88□□□□□ -0.99
HMGN1P16-201ENST00000508308 SMARCC1Q92922 1105 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P16-201ENST00000508308 SLC4A9Q96Q91 983 aa8.88□□□□□ -0.99
HMGN1P16-201ENST00000508308 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
HMGN1P16-201ENST00000508308 LOC102724428A0A0B4J2F2 783 aa8.87□□□□□ -0.99
HMGN1P16-201ENST00000508308 SIK1P57059 783 aa8.87□□□□□ -0.99
HMGN1P16-201ENST00000508308 AEBP1Q8IUX7 1158 aa8.87□□□□□ -0.99
HMGN1P16-201ENST00000508308 IFNL2Q8IZJ0 200 aa8.87□□□□□ -0.99
HMGN1P16-201ENST00000508308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
HMGN1P16-201ENST00000508308 FLAD1Q8NFF5 587 aa8.86□□□□□ -0.99
HMGN1P16-201ENST00000508308 TMOD3Q9NYL9 352 aa8.86□□□□□ -0.99
HMGN1P16-201ENST00000508308 KDM6AO15550 1401 aaPredicted RBP8.86□□□□□ -0.99
HMGN1P16-201ENST00000508308 KDRP35968 1356 aa8.86□□□□□ -0.99
HMGN1P16-201ENST00000508308 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
HMGN1P16-201ENST00000508308 MYH14Q7Z406 1995 aaKnown RBP8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 PHF14O94880 888 aa8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 AMER1Q5JTC6 1135 aaPredicted RBP8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 AK7Q96M32 723 aa8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 ZNF831Q5JPB2 1677 aa8.85□□□□□ -0.99
HMGN1P16-201ENST00000508308 ERVV-2B6SEH9 535 aa8.84□□□□□ -0.99
HMGN1P16-201ENST00000508308 COL5A3P25940 1745 aaPredicted RBP8.84□□□□□ -0.99
HMGN1P16-201ENST00000508308 SSFA2P28290 1259 aa8.84□□□□□ -0.99
HMGN1P16-201ENST00000508308 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
HMGN1P16-201ENST00000508308 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
HMGN1P16-201ENST00000508308 PER1O15534 1290 aaPredicted RBP8.83□□□□□ -1
HMGN1P16-201ENST00000508308 IL13P35225 146 aa8.83□□□□□ -1
HMGN1P16-201ENST00000508308 MORC1Q86VD1 984 aa8.83□□□□□ -1
HMGN1P16-201ENST00000508308 DCAF5Q96JK2 942 aa8.83□□□□□ -1
HMGN1P16-201ENST00000508308 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
HMGN1P16-201ENST00000508308 KIAA1551Q9HCM1 1747 aa8.83□□□□□ -1
HMGN1P16-201ENST00000508308 GNPATO15228 680 aa8.82□□□□□ -1
HMGN1P16-201ENST00000508308 PLEKHO1Q53GL0 409 aaPredicted RBP8.82□□□□□ -1
HMGN1P16-201ENST00000508308 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms