RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZNF831Q5JPB2 1677 aa26.56■■□□□ 1.84
SFXN1-209ENST00000508290 MRC1P22897 1456 aa26.55■■□□□ 1.84
SFXN1-209ENST00000508290 NFATC2IPQ8NCF5 419 aa26.55■■□□□ 1.84
SFXN1-209ENST00000508290 RSPH6AQ9H0K4 717 aa26.55■■□□□ 1.84
SFXN1-209ENST00000508290 ATP6V1AP38606 617 aa26.54■■□□□ 1.84
SFXN1-209ENST00000508290 AK7Q96M32 723 aa26.54■■□□□ 1.84
SFXN1-209ENST00000508290 SLC52A2Q9HAB3 445 aa26.54■■□□□ 1.84
SFXN1-209ENST00000508290 MAP3K5Q99683 1374 aa26.54■■□□□ 1.84
SFXN1-209ENST00000508290 SCN11AQ9UI33 1791 aa26.53■■□□□ 1.84
SFXN1-209ENST00000508290 RNMTO43148 476 aaKnown RBP26.53■■□□□ 1.84
SFXN1-209ENST00000508290 PRKAR2BP31323 418 aa26.53■■□□□ 1.84
SFXN1-209ENST00000508290 ADAMTS7Q9UKP4 1686 aa26.53■■□□□ 1.84
SFXN1-209ENST00000508290 GNAT3A8MTJ3 354 aa26.52■■□□□ 1.84
SFXN1-209ENST00000508290 C4BP0C0L5 1744 aa26.52■■□□□ 1.84
SFXN1-209ENST00000508290 PTGER2P43116 358 aa26.52■■□□□ 1.84
SFXN1-209ENST00000508290 TAF1LQ8IZX4 1826 aa26.51■■□□□ 1.83
SFXN1-209ENST00000508290 NEFMP07197 916 aa26.5■■□□□ 1.83
SFXN1-209ENST00000508290 PNNQ9H307 717 aaKnown RBP26.5■■□□□ 1.83
SFXN1-209ENST00000508290 ATF5Q9Y2D1 282 aaPredicted RBP26.5■■□□□ 1.83
SFXN1-209ENST00000508290 SSFA2P28290 1259 aa26.49■■□□□ 1.83
SFXN1-209ENST00000508290 SGIP1Q9BQI5 828 aa26.49■■□□□ 1.83
SFXN1-209ENST00000508290 MYBBP1AQ9BQG0 1328 aaKnown RBP26.48■■□□□ 1.83
SFXN1-209ENST00000508290 POLD1P28340 1107 aa26.48■■□□□ 1.83
SFXN1-209ENST00000508290 RBM42Q9BTD8 480 aaKnown RBP26.48■■□□□ 1.83
SFXN1-209ENST00000508290 LGR6Q9HBX8 967 aa26.48■■□□□ 1.83
SFXN1-209ENST00000508290 ITPK1Q13572 414 aa26.47■■□□□ 1.83
SFXN1-209ENST00000508290 LINC00116Q8NCU8 138 aa26.47■■□□□ 1.83
SFXN1-209ENST00000508290 RC3H1Q5TC82 1133 aaKnown RBP26.46■■□□□ 1.83
SFXN1-209ENST00000508290 COL23A1Q86Y22 540 aaPredicted RBP26.46■■□□□ 1.83
SFXN1-209ENST00000508290 TUBGCP6Q96RT7 1819 aa26.46■■□□□ 1.83
SFXN1-209ENST00000508290 CNTNAP4Q9C0A0 1308 aa26.45■■□□□ 1.83
SFXN1-209ENST00000508290 MSH5O43196 834 aa26.45■■□□□ 1.82
SFXN1-209ENST00000508290 TEFQ10587 303 aa26.45■■□□□ 1.82
SFXN1-209ENST00000508290 PHACTR3Q96KR7 559 aa26.45■■□□□ 1.82
SFXN1-209ENST00000508290 CICQ96RK0 1608 aaPredicted RBP26.45■■□□□ 1.82
SFXN1-209ENST00000508290 HTATSF1O43719 755 aaKnown RBP26.44■■□□□ 1.82
SFXN1-209ENST00000508290 ARXQ96QS3 562 aa26.44■■□□□ 1.82
SFXN1-209ENST00000508290 PTCD1O75127 700 aaKnown RBP26.43■■□□□ 1.82
SFXN1-209ENST00000508290 ADRA2BP18089 450 aa26.43■■□□□ 1.82
SFXN1-209ENST00000508290 CEMIPQ8WUJ3 1361 aa26.43■■□□□ 1.82
SFXN1-209ENST00000508290 COL24A1Q17RW2 1714 aa26.42■■□□□ 1.82
SFXN1-209ENST00000508290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.42■■□□□ 1.82
SFXN1-209ENST00000508290 GNPATO15228 680 aa26.42■■□□□ 1.82
SFXN1-209ENST00000508290 RTF1Q92541 710 aaKnown RBP26.42■■□□□ 1.82
SFXN1-209ENST00000508290 SLC4A9Q96Q91 983 aa26.42■■□□□ 1.82
SFXN1-209ENST00000508290 VSIG10Q8N0Z9 540 aa26.41■■□□□ 1.82
SFXN1-209ENST00000508290 IL17REQ8NFR9 667 aa26.41■■□□□ 1.82
SFXN1-209ENST00000508290 RTCBQ9Y3I0 505 aaKnown RBP26.41■■□□□ 1.82
SFXN1-209ENST00000508290 TTC5Q8N0Z6 440 aa26.4■■□□□ 1.82
SFXN1-209ENST00000508290 UBR3Q6ZT12 1888 aa26.39■■□□□ 1.82
SFXN1-209ENST00000508290 DCAF8L1A6NGE4 600 aa26.38■■□□□ 1.81
SFXN1-209ENST00000508290 COL5A3P25940 1745 aaPredicted RBP26.38■■□□□ 1.81
SFXN1-209ENST00000508290 PHF14O94880 888 aa26.37■■□□□ 1.81
SFXN1-209ENST00000508290 PRKRIP1Q9H875 184 aaPredicted RBP26.37■■□□□ 1.81
SFXN1-209ENST00000508290 MAPK8IP3Q9UPT6 1336 aa26.37■■□□□ 1.81
SFXN1-209ENST00000508290 RPS6KA4O75676 772 aa26.36■■□□□ 1.81
SFXN1-209ENST00000508290 TRAPPC3LQ5T215 181 aa26.36■■□□□ 1.81
SFXN1-209ENST00000508290 KCPQ6ZWJ8 1503 aa26.35■■□□□ 1.81
SFXN1-209ENST00000508290 FHDC1Q9C0D6 1143 aaPredicted RBP26.35■■□□□ 1.81
SFXN1-209ENST00000508290 VIRMAQ69YN4 1812 aaKnown RBP26.35■■□□□ 1.81
SFXN1-209ENST00000508290 ZNF316A6NFI3 1004 aaPredicted RBP26.34■■□□□ 1.81
SFXN1-209ENST00000508290 ZNF790Q6PG37 636 aa26.34■■□□□ 1.81
SFXN1-209ENST00000508290 PLEKHF1Q96S99 279 aa26.34■■□□□ 1.81
SFXN1-209ENST00000508290 CRKLP46109 303 aaKnown RBP26.33■■□□□ 1.81
SFXN1-209ENST00000508290 SLC39A6Q13433 755 aa26.33■■□□□ 1.81
SFXN1-209ENST00000508290 SYT17Q9BSW7 474 aa26.33■■□□□ 1.81
SFXN1-209ENST00000508290 TEX13AQ9BXU3 409 aaPredicted RBP26.33■■□□□ 1.81
SFXN1-209ENST00000508290 TJP1Q07157 1748 aa26.32■■□□□ 1.8
SFXN1-209ENST00000508290 AMIGO3Q86WK7 504 aa26.32■■□□□ 1.8
SFXN1-209ENST00000508290 UBR2Q8IWV8 1755 aa26.31■■□□□ 1.8
SFXN1-209ENST00000508290 BTBD11A6QL63 1104 aa26.31■■□□□ 1.8
SFXN1-209ENST00000508290 SIPA1L3O60292 1781 aaPredicted RBP26.3■■□□□ 1.8
SFXN1-209ENST00000508290 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
SFXN1-209ENST00000508290 CCDC87Q9NVE4 849 aa26.3■■□□□ 1.8
SFXN1-209ENST00000508290 STARD3NLO95772 234 aa26.29■■□□□ 1.8
SFXN1-209ENST00000508290 RFC4P35249 363 aa26.29■■□□□ 1.8
SFXN1-209ENST00000508290 WDR43Q15061 677 aaKnown RBP eCLIP26.29■■□□□ 1.8
SFXN1-209ENST00000508290 DNAJC10Q8IXB1 793 aa26.29■■□□□ 1.8
SFXN1-209ENST00000508290 NLGN1Q8N2Q7 840 aa26.29■■□□□ 1.8
SFXN1-209ENST00000508290 FMNL2Q96PY5 1086 aa26.29■■□□□ 1.8
SFXN1-209ENST00000508290 CYP19A1P11511 503 aaPredicted RBP26.28■■□□□ 1.8
SFXN1-209ENST00000508290 MSL1Q68DK7 614 aa26.28■■□□□ 1.8
SFXN1-209ENST00000508290 HEG1Q9ULI3 1381 aa26.28■■□□□ 1.8
SFXN1-209ENST00000508290 MCM10Q7L590 875 aa26.27■■□□□ 1.8
SFXN1-209ENST00000508290 PNISRQ8TF01 805 aaKnown RBP26.27■■□□□ 1.8
SFXN1-209ENST00000508290 ARHGEF1Q92888 912 aaKnown RBP26.27■■□□□ 1.8
SFXN1-209ENST00000508290 INTS5Q6P9B9 1019 aaKnown RBP26.26■■□□□ 1.79
SFXN1-209ENST00000508290 ZNF496Q96IT1 587 aaPredicted RBP26.26■■□□□ 1.79
SFXN1-209ENST00000508290 CD2APQ9Y5K6 639 aa26.25■■□□□ 1.79
SFXN1-209ENST00000508290 LMOD3Q0VAK6 560 aa26.24■■□□□ 1.79
SFXN1-209ENST00000508290 TAF7Q15545 349 aaPredicted RBP26.24■■□□□ 1.79
SFXN1-209ENST00000508290 SOS1Q07889 1333 aaPredicted RBP26.22■■□□□ 1.79
SFXN1-209ENST00000508290 SMIM5Q71RC9 77 aa26.22■■□□□ 1.79
SFXN1-209ENST00000508290 USP42Q9H9J4 1324 aaKnown RBP26.21■■□□□ 1.79
SFXN1-209ENST00000508290 MYH14Q7Z406 1995 aaKnown RBP26.21■■□□□ 1.79
SFXN1-209ENST00000508290 KLHL34Q8N239 644 aa26.21■■□□□ 1.79
SFXN1-209ENST00000508290 GYS1P13807 737 aa26.2■■□□□ 1.78
SFXN1-209ENST00000508290 DCTN1Q14203 1278 aa26.2■■□□□ 1.78
SFXN1-209ENST00000508290 A0A087WZG4 1122 aa26.19■■□□□ 1.78
SFXN1-209ENST00000508290 RUNDC1Q96C34 613 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms