RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 NFATC2IPQ8NCF5 419 aa27.19■■□□□ 1.94
HOXC9-203ENST00000508190 CDCA7LQ96GN5 454 aa27.19■■□□□ 1.94
HOXC9-203ENST00000508190 LAS1LQ9Y4W2 734 aaKnown RBP27.19■■□□□ 1.94
HOXC9-203ENST00000508190 GOLGA2Q08379 1002 aa27.18■■□□□ 1.94
HOXC9-203ENST00000508190 PRIM1P49642 420 aaKnown RBP27.17■■□□□ 1.94
HOXC9-203ENST00000508190 CALD1Q05682 793 aaKnown RBP27.17■■□□□ 1.94
HOXC9-203ENST00000508190 SYTL4Q96C24 671 aaPredicted RBP27.17■■□□□ 1.94
HOXC9-203ENST00000508190 MIS18AQ9NYP9 233 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 IL16Q14005 1332 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 KCNQ2O43526 872 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 TAF7Q15545 349 aaPredicted RBP27.16■■□□□ 1.94
HOXC9-203ENST00000508190 TMOD3Q9NYL9 352 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 UBR2Q8IWV8 1755 aa27.15■■□□□ 1.94
HOXC9-203ENST00000508190 FAM196AQ6ZSG2 479 aa27.15■■□□□ 1.94
HOXC9-203ENST00000508190 IFT57Q9NWB7 429 aa27.15■■□□□ 1.94
HOXC9-203ENST00000508190 ZNF853P0CG23 659 aa27.14■■□□□ 1.94
HOXC9-203ENST00000508190 PTF1AQ7RTS3 328 aa27.14■■□□□ 1.94
HOXC9-203ENST00000508190 CFAP44Q96MT7 982 aa27.14■■□□□ 1.94
HOXC9-203ENST00000508190 GNAI1P63096 354 aa27.13■■□□□ 1.93
HOXC9-203ENST00000508190 PIGBQ92521 554 aa27.13■■□□□ 1.93
HOXC9-203ENST00000508190 TSR2Q969E8 191 aaKnown RBP27.13■■□□□ 1.93
HOXC9-203ENST00000508190 BTBD11A6QL63 1104 aa27.12■■□□□ 1.93
HOXC9-203ENST00000508190 SLFN5Q08AF3 891 aa27.12■■□□□ 1.93
HOXC9-203ENST00000508190 CHL1O00533 1208 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 SLC39A6Q13433 755 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 TSPYL4Q9UJ04 414 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 TNS1Q9HBL0 1735 aaKnown RBP27.1■■□□□ 1.93
HOXC9-203ENST00000508190 E9PSI1 815 aa27.1■■□□□ 1.93
HOXC9-203ENST00000508190 KCNQ3O43525 872 aa27.1■■□□□ 1.93
HOXC9-203ENST00000508190 FANCIQ9NVI1 1328 aa27.1■■□□□ 1.93
HOXC9-203ENST00000508190 TRIM37O94972 964 aa27.07■■□□□ 1.92
HOXC9-203ENST00000508190 MYH16Q9H6N6 1097 aa27.07■■□□□ 1.92
HOXC9-203ENST00000508190 TRMT2AQ8IZ69 625 aaKnown RBP27.06■■□□□ 1.92
HOXC9-203ENST00000508190 BABAM1Q9NWV8 329 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 ASAP1Q9ULH1 1129 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 C5P01031 1676 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 KCPQ6ZWJ8 1503 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 DUSP27Q5VZP5 1158 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 ZNF790Q6PG37 636 aa27.05■■□□□ 1.92
HOXC9-203ENST00000508190 ATG3Q9NT62 314 aa27.05■■□□□ 1.92
HOXC9-203ENST00000508190 LY75O60449 1722 aa27.04■■□□□ 1.92
HOXC9-203ENST00000508190 BCL11BQ9C0K0 894 aaPredicted RBP27.03■■□□□ 1.92
HOXC9-203ENST00000508190 KRT24Q2M2I5 525 aa27.02■■□□□ 1.92
HOXC9-203ENST00000508190 TTC5Q8N0Z6 440 aa27.01■■□□□ 1.91
HOXC9-203ENST00000508190 EIF4A1P60842 406 aaKnown RBP27■■□□□ 1.91
HOXC9-203ENST00000508190 EXOSC9Q06265 439 aaKnown RBP27■■□□□ 1.91
HOXC9-203ENST00000508190 LAMB4A4D0S4 1761 aa26.99■■□□□ 1.91
HOXC9-203ENST00000508190 TJP1Q07157 1748 aa26.99■■□□□ 1.91
HOXC9-203ENST00000508190 ZNF496Q96IT1 587 aaPredicted RBP26.99■■□□□ 1.91
HOXC9-203ENST00000508190 PALLDQ8WX93 1383 aa26.99■■□□□ 1.91
HOXC9-203ENST00000508190 PTCD1O75127 700 aaKnown RBP26.98■■□□□ 1.91
HOXC9-203ENST00000508190 C8orf58Q8NAV2 365 aa26.97■■□□□ 1.91
HOXC9-203ENST00000508190 TSPYL6Q8N831 410 aa26.96■■□□□ 1.91
HOXC9-203ENST00000508190 TAF1LQ8IZX4 1826 aa26.96■■□□□ 1.91
HOXC9-203ENST00000508190 HEG1Q9ULI3 1381 aa26.96■■□□□ 1.91
HOXC9-203ENST00000508190 ELL2O00472 640 aaPredicted RBP26.95■■□□□ 1.91
HOXC9-203ENST00000508190 RBM42Q9BTD8 480 aaKnown RBP26.95■■□□□ 1.91
HOXC9-203ENST00000508190 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.91
HOXC9-203ENST00000508190 FMNL2Q96PY5 1086 aa26.95■■□□□ 1.9
HOXC9-203ENST00000508190 CICQ96RK0 1608 aaPredicted RBP26.94■■□□□ 1.9
HOXC9-203ENST00000508190 PRAMEF22A3QJZ6 481 aa26.94■■□□□ 1.9
HOXC9-203ENST00000508190 SMARCC1Q92922 1105 aaPredicted RBP26.94■■□□□ 1.9
HOXC9-203ENST00000508190 RGPD3A6NKT7 1758 aaPredicted RBP26.93■■□□□ 1.9
HOXC9-203ENST00000508190 RGPD4Q7Z3J3 1758 aa26.93■■□□□ 1.9
HOXC9-203ENST00000508190 COL5A3P25940 1745 aaPredicted RBP26.93■■□□□ 1.9
HOXC9-203ENST00000508190 SLC4A9Q96Q91 983 aa26.93■■□□□ 1.9
HOXC9-203ENST00000508190 ILDR2Q71H61 639 aa26.91■■□□□ 1.9
HOXC9-203ENST00000508190 GIGYF1O75420 1035 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-203ENST00000508190 APBA3O96018 575 aa26.9■■□□□ 1.9
HOXC9-203ENST00000508190 TWISTNBQ3B726 338 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-203ENST00000508190 LOC102724428A0A0B4J2F2 783 aa26.9■■□□□ 1.9
HOXC9-203ENST00000508190 SIK1P57059 783 aa26.9■■□□□ 1.9
HOXC9-203ENST00000508190 SNRPA1P09661 255 aaKnown RBP26.88■■□□□ 1.89
HOXC9-203ENST00000508190 KCNQ4P56696 695 aa26.88■■□□□ 1.89
HOXC9-203ENST00000508190 CACNA1FO60840 1977 aa26.87■■□□□ 1.89
HOXC9-203ENST00000508190 VAMP4O75379 141 aa26.87■■□□□ 1.89
HOXC9-203ENST00000508190 MYH14Q7Z406 1995 aaKnown RBP26.87■■□□□ 1.89
HOXC9-203ENST00000508190 DNAJC10Q8IXB1 793 aa26.86■■□□□ 1.89
HOXC9-203ENST00000508190 ATP6V1AP38606 617 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 VSIG10Q8N0Z9 540 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 NECTIN2Q92692 538 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 ITPK1Q13572 414 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 HOXB7P09629 217 aa26.84■■□□□ 1.89
HOXC9-203ENST00000508190 EIF2S2P20042 333 aaKnown RBP26.84■■□□□ 1.89
HOXC9-203ENST00000508190 CCNL1Q9UK58 526 aaPredicted RBP26.84■■□□□ 1.89
HOXC9-203ENST00000508190 RREB1Q92766 1687 aa26.83■■□□□ 1.89
HOXC9-203ENST00000508190 PLSCR1O15162 318 aa26.83■■□□□ 1.89
HOXC9-203ENST00000508190 TCERG1O14776 1098 aaKnown RBP26.82■■□□□ 1.88
HOXC9-203ENST00000508190 SF3B2Q13435 895 aaKnown RBP26.82■■□□□ 1.88
HOXC9-203ENST00000508190 HDGFL1Q5TGJ6 251 aa26.82■■□□□ 1.88
HOXC9-203ENST00000508190 SOS1Q07889 1333 aaPredicted RBP26.81■■□□□ 1.88
HOXC9-203ENST00000508190 C4BP0C0L5 1744 aa26.81■■□□□ 1.88
HOXC9-203ENST00000508190 CT47B1P0C2W7 299 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-203ENST00000508190 PROM2Q8N271 834 aa26.8■■□□□ 1.88
HOXC9-203ENST00000508190 LRRC4BQ9NT99 713 aa26.8■■□□□ 1.88
HOXC9-203ENST00000508190 EN1Q05925 392 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-203ENST00000508190 TXNRD1Q16881 649 aa26.8■■□□□ 1.88
HOXC9-203ENST00000508190 NUP188Q5SRE5 1749 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms