RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CUL4AQ13619 759 aa16.36■□□□□ 0.21
SNCAIP-209ENST00000508017 SOX12O15370 315 aa16.35■□□□□ 0.21
SNCAIP-209ENST00000508017 MBD3O95983 291 aa16.35■□□□□ 0.21
SNCAIP-209ENST00000508017 TERF1P54274 439 aa16.35■□□□□ 0.21
SNCAIP-209ENST00000508017 GDPD2Q9HCC8 539 aa16.35■□□□□ 0.21
SNCAIP-209ENST00000508017 RGPD1P0DJD0 1748 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 RILPL2Q969X0 211 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 ANO2Q9NQ90 1003 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 UQCRHLA0A096LP55 91 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 GNAI2P04899 355 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 UQCRHP07919 91 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 CCT4P50991 539 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
SNCAIP-209ENST00000508017 TCHHQ07283 1943 aa16.33■□□□□ 0.21
SNCAIP-209ENST00000508017 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 MX1P20591 662 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 CHMLP26374 656 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 NUTM2FA1L443 756 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
SNCAIP-209ENST00000508017 TTC21BQ7Z4L5 1316 aa16.32■□□□□ 0.2
SNCAIP-209ENST00000508017 MCM2P49736 904 aa16.32■□□□□ 0.2
SNCAIP-209ENST00000508017 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
SNCAIP-209ENST00000508017 IL25Q9H293 177 aa16.32■□□□□ 0.2
SNCAIP-209ENST00000508017 MCCP23508 829 aa16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 MTHFSDQ2M296 383 aaKnown RBP16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 TSPY26PQ9H489 355 aa16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 SPATA31D1Q6ZQQ2 1576 aa16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 MAP3K19Q56UN5 1328 aa16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 OVOS2A0A0J9YW53 1432 aa16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 OVOS2Q6IE36 1432 aa16.31■□□□□ 0.2
SNCAIP-209ENST00000508017 MLECQ14165 292 aa16.3■□□□□ 0.2
SNCAIP-209ENST00000508017 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
SNCAIP-209ENST00000508017 MPNDQ8N594 471 aa16.3■□□□□ 0.2
SNCAIP-209ENST00000508017 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-209ENST00000508017 MCM5P33992 734 aa16.29■□□□□ 0.2
SNCAIP-209ENST00000508017 ACEP12821 1306 aa16.29■□□□□ 0.2
SNCAIP-209ENST00000508017 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
SNCAIP-209ENST00000508017 ANAPC15P60006 121 aa16.29■□□□□ 0.2
SNCAIP-209ENST00000508017 CSPP1Q1MSJ5 1256 aa16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 XRN1Q8IZH2 1706 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
SNCAIP-209ENST00000508017 ATP8B2P98198 1209 aa16.27■□□□□ 0.2
SNCAIP-209ENST00000508017 FLIIQ13045 1269 aa16.27■□□□□ 0.2
SNCAIP-209ENST00000508017 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.2
SNCAIP-209ENST00000508017 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.2
SNCAIP-209ENST00000508017 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
SNCAIP-209ENST00000508017 TECPR2O15040 1411 aa16.27■□□□□ 0.19
SNCAIP-209ENST00000508017 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.19
SNCAIP-209ENST00000508017 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 ARID3AQ99856 593 aa16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
SNCAIP-209ENST00000508017 SASS6Q6UVJ0 657 aa16.25■□□□□ 0.19
SNCAIP-209ENST00000508017 ARHGEF10O15013 1369 aa16.25■□□□□ 0.19
SNCAIP-209ENST00000508017 GNAI3P08754 354 aa16.25■□□□□ 0.19
SNCAIP-209ENST00000508017 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
SNCAIP-209ENST00000508017 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
SNCAIP-209ENST00000508017 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
SNCAIP-209ENST00000508017 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 IL17RAQ96F46 866 aa16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 WDR33Q9C0J8 1336 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 USP6P35125 1406 aa16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 HSPA4P34932 840 aa16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 CNPY2Q9Y2B0 182 aa16.24■□□□□ 0.19
SNCAIP-209ENST00000508017 DYNC1I1O14576 645 aa16.23■□□□□ 0.19
SNCAIP-209ENST00000508017 KIAA2012Q0VF49 1180 aa16.23■□□□□ 0.19
SNCAIP-209ENST00000508017 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
SNCAIP-209ENST00000508017 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
SNCAIP-209ENST00000508017 USP31Q70CQ4 1352 aa16.23■□□□□ 0.19
SNCAIP-209ENST00000508017 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
SNCAIP-209ENST00000508017 DTNBO60941 627 aa16.22■□□□□ 0.19
SNCAIP-209ENST00000508017 PHF14O94880 888 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 EYA1Q99502 592 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 USP44Q9H0E7 712 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 AGLP35573 1532 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
SNCAIP-209ENST00000508017 TSPOAP1O95153 1857 aa16.21■□□□□ 0.18
SNCAIP-209ENST00000508017 C17orf53Q8N3J3 647 aaPredicted RBP16.2■□□□□ 0.18
SNCAIP-209ENST00000508017 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms