RNA–Protein interactions for RNA: ENST00000507082.1

MIB2-221, Transcript of mindbomb E3 ubiquitin protein ligase 2, human

TSL 2

Gene MIB2, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MIB2-221	ENST00000507082	PSD	A5PKW4	1024 aa	Predicted RBP	32.62	■■■□□ 2.81
MIB2-221	ENST00000507082	DIEXF	Q68CQ4	756 aa	Known RBP	32.62	■■■□□ 2.81
MIB2-221	ENST00000507082	PAPPA	Q13219	1627 aa		32.61	■■■□□ 2.81
MIB2-221	ENST00000507082	SMARCC1	Q92922	1105 aa	Predicted RBP	32.61	■■■□□ 2.81
MIB2-221	ENST00000507082	CCNL1	Q9UK58	526 aa	Predicted RBP	32.61	■■■□□ 2.81
MIB2-221	ENST00000507082	R3HDM1	Q15032	1099 aa	Known RBP	32.6	■■■□□ 2.81
MIB2-221	ENST00000507082	SLC27A3	Q5K4L6	730 aa		32.6	■■■□□ 2.81
MIB2-221	ENST00000507082	NFE2L2	Q16236	605 aa		32.58	■■■□□ 2.81
MIB2-221	ENST00000507082	NBPF14	Q5TI25	921 aa		32.58	■■■□□ 2.81
MIB2-221	ENST00000507082	MCM10	Q7L590	875 aa		32.58	■■■□□ 2.81
MIB2-221	ENST00000507082	SIPA1L3	O60292	1781 aa	Predicted RBP	32.58	■■■□□ 2.81
MIB2-221	ENST00000507082	DCTN1	Q14203	1278 aa		32.58	■■■□□ 2.81
MIB2-221	ENST00000507082	CEMIP	Q8WUJ3	1361 aa		32.56	■■■□□ 2.8
MIB2-221	ENST00000507082	C5	P01031	1676 aa		32.56	■■■□□ 2.8
MIB2-221	ENST00000507082	TAF1L	Q8IZX4	1826 aa		32.56	■■■□□ 2.8
MIB2-221	ENST00000507082	RTF1	Q92541	710 aa	Known RBP	32.56	■■■□□ 2.8
MIB2-221	ENST00000507082	RUNDC1	Q96C34	613 aa		32.55	■■■□□ 2.8
MIB2-221	ENST00000507082	LOC102724428	A0A0B4J2F2	783 aa		32.53	■■■□□ 2.8
MIB2-221	ENST00000507082	SIK1	P57059	783 aa		32.53	■■■□□ 2.8
MIB2-221	ENST00000507082	TEF	Q10587	303 aa		32.53	■■■□□ 2.8
MIB2-221	ENST00000507082	SLC39A6	Q13433	755 aa		32.53	■■■□□ 2.8
MIB2-221	ENST00000507082	PNISR	Q8TF01	805 aa	Known RBP	32.53	■■■□□ 2.8
MIB2-221	ENST00000507082	RRP7A	Q9Y3A4	280 aa	Known RBP	32.53	■■■□□ 2.8
MIB2-221	ENST00000507082	ZNF827	Q17R98	1081 aa		32.52	■■■□□ 2.8
MIB2-221	ENST00000507082	RBM42	Q9BTD8	480 aa	Known RBP	32.52	■■■□□ 2.8
MIB2-221	ENST00000507082	HTATSF1	O43719	755 aa	Known RBP	32.5	■■■□□ 2.79
MIB2-221	ENST00000507082	PTCD1	O75127	700 aa	Known RBP	32.5	■■■□□ 2.79
MIB2-221	ENST00000507082	TMPO	P42166	694 aa	Known RBP	32.5	■■■□□ 2.79
MIB2-221	ENST00000507082	SLC4A9	Q96Q91	983 aa		32.5	■■■□□ 2.79
MIB2-221	ENST00000507082	STK32B	Q9NY57	414 aa		32.5	■■■□□ 2.79
MIB2-221	ENST00000507082	SLC15A2	Q16348	729 aa		32.49	■■■□□ 2.79
MIB2-221	ENST00000507082	RIPK4	P57078	832 aa		32.49	■■■□□ 2.79
MIB2-221	ENST00000507082	NEUROD2	Q15784	382 aa		32.49	■■■□□ 2.79
MIB2-221	ENST00000507082	THUMPD2	Q9BTF0	503 aa	Known RBP	32.49	■■■□□ 2.79
MIB2-221	ENST00000507082	ATP6V1A	P38606	617 aa		32.48	■■■□□ 2.79
MIB2-221	ENST00000507082	ITPK1	Q13572	414 aa		32.48	■■■□□ 2.79
MIB2-221	ENST00000507082	TUBGCP6	Q96RT7	1819 aa		32.47	■■■□□ 2.79
MIB2-221	ENST00000507082	AKT1S1	Q96B36	256 aa		32.46	■■■□□ 2.79
MIB2-221	ENST00000507082	UBR2	Q8IWV8	1755 aa		32.46	■■■□□ 2.79
MIB2-221	ENST00000507082	ZNF831	Q5JPB2	1677 aa		32.46	■■■□□ 2.79
MIB2-221	ENST00000507082	C4B	P0C0L5	1744 aa		32.45	■■■□□ 2.79
MIB2-221	ENST00000507082	KCP	Q6ZWJ8	1503 aa		32.45	■■■□□ 2.79
MIB2-221	ENST00000507082	LINC00116	Q8NCU8	138 aa		32.44	■■■□□ 2.78
MIB2-221	ENST00000507082	TJP1	Q07157	1748 aa		32.43	■■■□□ 2.78
MIB2-221	ENST00000507082	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.43	■■■□□ 2.78
MIB2-221	ENST00000507082	BTBD11	A6QL63	1104 aa		32.42	■■■□□ 2.78
MIB2-221	ENST00000507082	COL5A3	P25940	1745 aa	Predicted RBP	32.42	■■■□□ 2.78
MIB2-221	ENST00000507082	APAF1	O14727	1248 aa		32.41	■■■□□ 2.78
MIB2-221	ENST00000507082	SENP3-EIF4A1	A0A087X0R7	540 aa		32.41	■■■□□ 2.78
MIB2-221	ENST00000507082	KCNQ3	O43525	872 aa		32.41	■■■□□ 2.78
MIB2-221	ENST00000507082	ZNF790	Q6PG37	636 aa		32.41	■■■□□ 2.78
MIB2-221	ENST00000507082	CASZ1	Q86V15	1759 aa		32.4	■■■□□ 2.78
MIB2-221	ENST00000507082	TTC5	Q8N0Z6	440 aa		32.4	■■■□□ 2.78
MIB2-221	ENST00000507082	TFCP2L1	Q9NZI6	479 aa		32.4	■■■□□ 2.78
MIB2-221	ENST00000507082	FAM9B	Q8IZU0	186 aa		32.39	■■■□□ 2.78
MIB2-221	ENST00000507082	QSER1	Q2KHR3	1735 aa		32.38	■■■□□ 2.77
MIB2-221	ENST00000507082	MIS18A	Q9NYP9	233 aa		32.38	■■■□□ 2.77
MIB2-221	ENST00000507082	TRIM35	Q9UPQ4	493 aa		32.38	■■■□□ 2.77
MIB2-221	ENST00000507082	CIC	Q96RK0	1608 aa	Predicted RBP	32.37	■■■□□ 2.77
MIB2-221	ENST00000507082	TAF7	Q15545	349 aa	Predicted RBP	32.36	■■■□□ 2.77
MIB2-221	ENST00000507082	ZNF496	Q96IT1	587 aa	Predicted RBP	32.36	■■■□□ 2.77
MIB2-221	ENST00000507082	LMOD3	Q0VAK6	560 aa		32.36	■■■□□ 2.77
MIB2-221	ENST00000507082	UBR3	Q6ZT12	1888 aa		32.35	■■■□□ 2.77
MIB2-221	ENST00000507082	PNPLA7	Q6ZV29	1317 aa		32.34	■■■□□ 2.77
MIB2-221	ENST00000507082	SMIM5	Q71RC9	77 aa		32.34	■■■□□ 2.77
MIB2-221	ENST00000507082	AMIGO3	Q86WK7	504 aa		32.34	■■■□□ 2.77
MIB2-221	ENST00000507082	DNAJC10	Q8IXB1	793 aa		32.34	■■■□□ 2.77
MIB2-221	ENST00000507082	AK7	Q96M32	723 aa		32.34	■■■□□ 2.77
MIB2-221	ENST00000507082	KDM3B	Q7LBC6	1761 aa		32.34	■■■□□ 2.77
MIB2-221	ENST00000507082	MYH14	Q7Z406	1995 aa	Known RBP	32.33	■■■□□ 2.77
MIB2-221	ENST00000507082	MIER1	Q8N108	512 aa		32.31	■■■□□ 2.76
MIB2-221	ENST00000507082	HEG1	Q9ULI3	1381 aa		32.3	■■■□□ 2.76
MIB2-221	ENST00000507082	HMGB2	P26583	209 aa	Known RBP	32.3	■■■□□ 2.76
MIB2-221	ENST00000507082	GNPAT	O15228	680 aa		32.29	■■■□□ 2.76
MIB2-221	ENST00000507082	FMNL2	Q96PY5	1086 aa		32.29	■■■□□ 2.76
MIB2-221	ENST00000507082	PHF14	O94880	888 aa		32.28	■■■□□ 2.76
MIB2-221	ENST00000507082	CCER2	I3L3R5	266 aa		32.28	■■■□□ 2.76
MIB2-221	ENST00000507082	CRKL	P46109	303 aa	Known RBP	32.28	■■■□□ 2.76
MIB2-221	ENST00000507082	COL23A1	Q86Y22	540 aa	Predicted RBP	32.28	■■■□□ 2.76
MIB2-221	ENST00000507082	VSIG10	Q8N0Z9	540 aa		32.28	■■■□□ 2.76
MIB2-221	ENST00000507082	ZBTB7A	O95365	584 aa		32.27	■■■□□ 2.76
MIB2-221	ENST00000507082	CNTNAP4	Q9C0A0	1308 aa		32.27	■■■□□ 2.76
MIB2-221	ENST00000507082	SRCAP	Q6ZRS2	3230 aa		32.26	■■■□□ 2.76
MIB2-221	ENST00000507082	MSH5	O43196	834 aa		32.25	■■■□□ 2.75
MIB2-221	ENST00000507082	CYP19A1	P11511	503 aa	Predicted RBP	32.25	■■■□□ 2.75
MIB2-221	ENST00000507082	RC3H1	Q5TC82	1133 aa	Known RBP	32.24	■■■□□ 2.75
MIB2-221	ENST00000507082	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.24	■■■□□ 2.75
MIB2-221	ENST00000507082	PRAMEF22	A3QJZ6	481 aa		32.24	■■■□□ 2.75
MIB2-221	ENST00000507082	INTS5	Q6P9B9	1019 aa	Known RBP	32.23	■■■□□ 2.75
MIB2-221	ENST00000507082	TSPYL4	Q9UJ04	414 aa		32.23	■■■□□ 2.75
MIB2-221	ENST00000507082	LAS1L	Q9Y4W2	734 aa	Known RBP	32.23	■■■□□ 2.75
MIB2-221	ENST00000507082	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.21	■■■□□ 2.75
MIB2-221	ENST00000507082	LRP5	O75197	1615 aa		32.2	■■■□□ 2.75
MIB2-221	ENST00000507082	SSFA2	P28290	1259 aa		32.2	■■■□□ 2.75
MIB2-221	ENST00000507082	CCDC87	Q9NVE4	849 aa		32.2	■■■□□ 2.75
MIB2-221	ENST00000507082	RTCB	Q9Y3I0	505 aa	Known RBP	32.2	■■■□□ 2.75
MIB2-221	ENST00000507082	SALL2	Q9Y467	1007 aa	Predicted RBP	32.2	■■■□□ 2.75
MIB2-221	ENST00000507082	RPS6KA4	O75676	772 aa		32.19	■■■□□ 2.74
MIB2-221	ENST00000507082	EIF4A1	P60842	406 aa	Known RBP	32.19	■■■□□ 2.74
MIB2-221	ENST00000507082	FLAD1	Q8NFF5	587 aa		32.18	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms