RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
CLCN3-205ENST00000506924 CLSPNQ9HAW4 1339 aa13.46□□□□□ -0.25
CLCN3-205ENST00000506924 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.25
CLCN3-205ENST00000506924 FAM117AQ9C073 453 aa13.46□□□□□ -0.25
CLCN3-205ENST00000506924 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
CLCN3-205ENST00000506924 GOPCQ9HD26 462 aa13.45□□□□□ -0.26
CLCN3-205ENST00000506924 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
CLCN3-205ENST00000506924 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
CLCN3-205ENST00000506924 CENPJQ9HC77 1338 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-205ENST00000506924 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-205ENST00000506924 SLC10A3P09131 477 aa13.43□□□□□ -0.26
CLCN3-205ENST00000506924 XPCQ01831 940 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-205ENST00000506924 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
CLCN3-205ENST00000506924 PRR14Q9BWN1 585 aa13.43□□□□□ -0.26
CLCN3-205ENST00000506924 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
CLCN3-205ENST00000506924 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
CLCN3-205ENST00000506924 FOXO3O43524 673 aa13.42□□□□□ -0.26
CLCN3-205ENST00000506924 TSR3Q9UJK0 312 aaKnown RBP13.42□□□□□ -0.26
CLCN3-205ENST00000506924 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
CLCN3-205ENST00000506924 GCGRP47871 477 aa13.41□□□□□ -0.26
CLCN3-205ENST00000506924 THSD4Q6ZMP0 1018 aa13.41□□□□□ -0.26
CLCN3-205ENST00000506924 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
CLCN3-205ENST00000506924 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
CLCN3-205ENST00000506924 COL16A1Q07092 1604 aaPredicted RBP13.41□□□□□ -0.26
CLCN3-205ENST00000506924 AHDC1Q5TGY3 1603 aaPredicted RBP13.41□□□□□ -0.26
CLCN3-205ENST00000506924 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
CLCN3-205ENST00000506924 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
CLCN3-205ENST00000506924 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
CLCN3-205ENST00000506924 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
CLCN3-205ENST00000506924 USP46P62068 366 aa13.4□□□□□ -0.26
CLCN3-205ENST00000506924 NYAP1Q6ZVC0 841 aa13.4□□□□□ -0.26
CLCN3-205ENST00000506924 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
CLCN3-205ENST00000506924 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
CLCN3-205ENST00000506924 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
CLCN3-205ENST00000506924 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
CLCN3-205ENST00000506924 PPP4CP60510 307 aa13.38□□□□□ -0.27
CLCN3-205ENST00000506924 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
CLCN3-205ENST00000506924 NUDT16Q96DE0 195 aaKnown RBP13.38□□□□□ -0.27
CLCN3-205ENST00000506924 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
CLCN3-205ENST00000506924 EIF3AQ14152 1382 aaKnown RBP13.37□□□□□ -0.27
CLCN3-205ENST00000506924 RNF40O75150 1001 aa13.37□□□□□ -0.27
CLCN3-205ENST00000506924 BCAMP50895 628 aa13.37□□□□□ -0.27
CLCN3-205ENST00000506924 SH3D19Q5HYK7 790 aa13.37□□□□□ -0.27
CLCN3-205ENST00000506924 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
CLCN3-205ENST00000506924 TULP4Q9NRJ4 1543 aa13.37□□□□□ -0.27
CLCN3-205ENST00000506924 JCADQ9P266 1359 aa13.36□□□□□ -0.27
CLCN3-205ENST00000506924 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
CLCN3-205ENST00000506924 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
CLCN3-205ENST00000506924 CFHP08603 1231 aa13.36□□□□□ -0.27
CLCN3-205ENST00000506924 GJA5P36382 358 aa13.36□□□□□ -0.27
CLCN3-205ENST00000506924 NUTM1Q86Y26 1132 aa13.36□□□□□ -0.27
CLCN3-205ENST00000506924 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
CLCN3-205ENST00000506924 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
CLCN3-205ENST00000506924 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
CLCN3-205ENST00000506924 KDM4AO75164 1064 aa13.35□□□□□ -0.27
CLCN3-205ENST00000506924 PSME1Q06323 249 aa13.35□□□□□ -0.27
CLCN3-205ENST00000506924 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
CLCN3-205ENST00000506924 SPNS2Q8IVW8 549 aa13.35□□□□□ -0.27
CLCN3-205ENST00000506924 LRRC59Q96AG4 307 aaKnown RBP13.35□□□□□ -0.27
CLCN3-205ENST00000506924 KCTD12Q96CX2 325 aaKnown RBP13.35□□□□□ -0.27
CLCN3-205ENST00000506924 SOS2Q07890 1332 aaPredicted RBP13.35□□□□□ -0.27
CLCN3-205ENST00000506924 DISP3Q9P2K9 1392 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 MED1Q15648 1581 aaPredicted RBP13.34□□□□□ -0.27
CLCN3-205ENST00000506924 ST20-MTHFSA0A0A6YYL1 179 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 ATP7BP35670 1465 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 PXDNQ92626 1479 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
CLCN3-205ENST00000506924 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
CLCN3-205ENST00000506924 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
CLCN3-205ENST00000506924 SKIV2LQ15477 1246 aaKnown RBP13.32□□□□□ -0.28
CLCN3-205ENST00000506924 TUSC1Q2TAM9 212 aa13.32□□□□□ -0.28
CLCN3-205ENST00000506924 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
CLCN3-205ENST00000506924 USP47Q96K76 1375 aa13.32□□□□□ -0.28
CLCN3-205ENST00000506924 SHPRHQ149N8 1683 aa13.31□□□□□ -0.28
CLCN3-205ENST00000506924 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
CLCN3-205ENST00000506924 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
CLCN3-205ENST00000506924 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
CLCN3-205ENST00000506924 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
CLCN3-205ENST00000506924 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
CLCN3-205ENST00000506924 LRP6O75581 1613 aa13.3□□□□□ -0.28
CLCN3-205ENST00000506924 ACEP12821 1306 aa13.3□□□□□ -0.28
CLCN3-205ENST00000506924 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
CLCN3-205ENST00000506924 TESK2Q96S53 571 aa13.29□□□□□ -0.28
CLCN3-205ENST00000506924 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
CLCN3-205ENST00000506924 SPATA31A6Q5VVP1 1343 aa13.29□□□□□ -0.28
CLCN3-205ENST00000506924 SPATA31A3Q5VYP0 1347 aa13.29□□□□□ -0.28
CLCN3-205ENST00000506924 HOXA2O43364 376 aa13.28□□□□□ -0.28
CLCN3-205ENST00000506924 ADAMTS2O95450 1211 aa13.28□□□□□ -0.28
CLCN3-205ENST00000506924 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
CLCN3-205ENST00000506924 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
CLCN3-205ENST00000506924 SPTLC1O15269 473 aa13.27□□□□□ -0.29
CLCN3-205ENST00000506924 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
CLCN3-205ENST00000506924 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.29
CLCN3-205ENST00000506924 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
CLCN3-205ENST00000506924 TNS3Q68CZ2 1445 aa13.26□□□□□ -0.29
CLCN3-205ENST00000506924 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms