RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 RALBP1Q15311 655 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 SULT6B1Q6IMI4 303 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 DEFB132Q7Z7B7 95 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.85
GYPB-206ENST00000506516 IGSF1Q8N6C5 1336 aa9.76□□□□□ -0.85
GYPB-206ENST00000506516 BCL9O00512 1426 aa9.75□□□□□ -0.85
GYPB-206ENST00000506516 MAP3K13O43283 966 aa9.75□□□□□ -0.85
GYPB-206ENST00000506516 NKX1-1Q15270 411 aaPredicted RBP9.75□□□□□ -0.85
GYPB-206ENST00000506516 PLEKHO1Q53GL0 409 aaPredicted RBP9.75□□□□□ -0.85
GYPB-206ENST00000506516 NUDCQ9Y266 331 aa9.75□□□□□ -0.85
GYPB-206ENST00000506516 PCDH11XQ9BZA7 1347 aa9.75□□□□□ -0.85
GYPB-206ENST00000506516 PCDH11YQ9BZA8 1340 aa9.75□□□□□ -0.85
GYPB-206ENST00000506516 U2SURPO15042 1029 aaKnown RBP9.74□□□□□ -0.85
GYPB-206ENST00000506516 EN1Q05925 392 aaPredicted RBP9.74□□□□□ -0.85
GYPB-206ENST00000506516 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
GYPB-206ENST00000506516 IFNL1Q8IU54 200 aa9.74□□□□□ -0.85
GYPB-206ENST00000506516 ACSBG1Q96GR2 724 aa9.74□□□□□ -0.85
GYPB-206ENST00000506516 DCBLD2Q96PD2 775 aa9.74□□□□□ -0.85
GYPB-206ENST00000506516 MEGF6O75095 1541 aa9.73□□□□□ -0.85
GYPB-206ENST00000506516 PLSCR1O15162 318 aa9.73□□□□□ -0.85
GYPB-206ENST00000506516 PSEN1P49768 467 aa9.73□□□□□ -0.85
GYPB-206ENST00000506516 IFNL2Q8IZJ0 200 aa9.73□□□□□ -0.85
GYPB-206ENST00000506516 LRRC37A3O60309 1634 aa9.73□□□□□ -0.85
GYPB-206ENST00000506516 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
GYPB-206ENST00000506516 KCNQ2O43526 872 aa9.72□□□□□ -0.85
GYPB-206ENST00000506516 HSP90AB1P08238 724 aaKnown RBP9.72□□□□□ -0.85
GYPB-206ENST00000506516 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
GYPB-206ENST00000506516 EZH2Q15910 746 aaKnown RBP9.72□□□□□ -0.85
GYPB-206ENST00000506516 SYTL4Q96C24 671 aaPredicted RBP9.72□□□□□ -0.85
GYPB-206ENST00000506516 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
GYPB-206ENST00000506516 CYP27B1O15528 508 aa9.71□□□□□ -0.86
GYPB-206ENST00000506516 HMOX1P09601 288 aa9.71□□□□□ -0.86
GYPB-206ENST00000506516 C1orf141Q5JVX7 400 aa9.71□□□□□ -0.86
GYPB-206ENST00000506516 AEBP1Q8IUX7 1158 aa9.71□□□□□ -0.86
GYPB-206ENST00000506516 CAMKK2Q96RR4 588 aa9.71□□□□□ -0.86
GYPB-206ENST00000506516 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.86
GYPB-206ENST00000506516 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
GYPB-206ENST00000506516 U2AF1L5P0DN76 240 aaPredicted RBP9.7□□□□□ -0.86
GYPB-206ENST00000506516 PHKG2P15735 406 aa9.7□□□□□ -0.86
GYPB-206ENST00000506516 U2AF1Q01081 240 aaKnown RBP eCLIP9.7□□□□□ -0.86
GYPB-206ENST00000506516 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
GYPB-206ENST00000506516 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
GYPB-206ENST00000506516 KDRP35968 1356 aa9.7□□□□□ -0.86
GYPB-206ENST00000506516 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
GYPB-206ENST00000506516 RGPD1P0DJD0 1748 aa9.69□□□□□ -0.86
GYPB-206ENST00000506516 HMGB2P26583 209 aaKnown RBP9.69□□□□□ -0.86
GYPB-206ENST00000506516 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
GYPB-206ENST00000506516 PTF1AQ7RTS3 328 aa9.69□□□□□ -0.86
GYPB-206ENST00000506516 MS4A3Q96HJ5 214 aa9.69□□□□□ -0.86
GYPB-206ENST00000506516 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
GYPB-206ENST00000506516 PNNQ9H307 717 aaKnown RBP9.69□□□□□ -0.86
GYPB-206ENST00000506516 GTPBP6O43824 516 aaPredicted RBP9.68□□□□□ -0.86
GYPB-206ENST00000506516 FCHSD2O94868 740 aa9.68□□□□□ -0.86
GYPB-206ENST00000506516 NEFMP07197 916 aa9.68□□□□□ -0.86
GYPB-206ENST00000506516 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
GYPB-206ENST00000506516 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
GYPB-206ENST00000506516 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
GYPB-206ENST00000506516 PRKRIP1Q9H875 184 aaPredicted RBP9.68□□□□□ -0.86
GYPB-206ENST00000506516 TSHZ2Q9NRE2 1034 aa9.68□□□□□ -0.86
GYPB-206ENST00000506516 ERVV-2B6SEH9 535 aa9.67□□□□□ -0.86
GYPB-206ENST00000506516 ANP32CO43423 234 aa9.67□□□□□ -0.86
GYPB-206ENST00000506516 TXNRD1Q16881 649 aa9.67□□□□□ -0.86
GYPB-206ENST00000506516 GAS2L2Q8NHY3 880 aa9.67□□□□□ -0.86
GYPB-206ENST00000506516 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
GYPB-206ENST00000506516 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
GYPB-206ENST00000506516 CABP4P57796 275 aa9.66□□□□□ -0.86
GYPB-206ENST00000506516 MTHFSDQ2M296 383 aaKnown RBP9.66□□□□□ -0.86
GYPB-206ENST00000506516 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
GYPB-206ENST00000506516 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
GYPB-206ENST00000506516 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
GYPB-206ENST00000506516 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
GYPB-206ENST00000506516 PIGBQ92521 554 aa9.65□□□□□ -0.86
GYPB-206ENST00000506516 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
GYPB-206ENST00000506516 TNS1Q9HBL0 1735 aaKnown RBP9.64□□□□□ -0.87
GYPB-206ENST00000506516 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
GYPB-206ENST00000506516 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
GYPB-206ENST00000506516 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
GYPB-206ENST00000506516 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
GYPB-206ENST00000506516 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
GYPB-206ENST00000506516 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
GYPB-206ENST00000506516 STK32BQ9NY57 414 aa9.63□□□□□ -0.87
GYPB-206ENST00000506516 CCNL1Q9UK58 526 aaPredicted RBP9.63□□□□□ -0.87
GYPB-206ENST00000506516 NHSQ6T4R5 1651 aa9.63□□□□□ -0.87
GYPB-206ENST00000506516 SBF2Q86WG5 1849 aa9.63□□□□□ -0.87
GYPB-206ENST00000506516 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
GYPB-206ENST00000506516 MAPK8IP3Q9UPT6 1336 aa9.62□□□□□ -0.87
GYPB-206ENST00000506516 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
GYPB-206ENST00000506516 RNMTO43148 476 aaKnown RBP9.62□□□□□ -0.87
GYPB-206ENST00000506516 LGR6Q9HBX8 967 aa9.62□□□□□ -0.87
GYPB-206ENST00000506516 SHANK3Q9BYB0 1731 aa9.62□□□□□ -0.87
GYPB-206ENST00000506516 HTATSF1O43719 755 aaKnown RBP9.61□□□□□ -0.87
GYPB-206ENST00000506516 TEFQ10587 303 aa9.61□□□□□ -0.87
GYPB-206ENST00000506516 SLC15A2Q16348 729 aa9.61□□□□□ -0.87
GYPB-206ENST00000506516 LHX8Q68G74 356 aa9.61□□□□□ -0.87
GYPB-206ENST00000506516 ATG3Q9NT62 314 aa9.61□□□□□ -0.87
GYPB-206ENST00000506516 LRRC4BQ9NT99 713 aa9.61□□□□□ -0.87
GYPB-206ENST00000506516 ASAP1Q9ULH1 1129 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms