RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 CAMK4Q16566 473 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
KLHL3-207ENST00000506491 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 KLHL10Q6JEL2 608 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
KLHL3-207ENST00000506491 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
KLHL3-207ENST00000506491 CA8P35219 290 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 UBE4AQ14139 1066 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
KLHL3-207ENST00000506491 VPS36Q86VN1 386 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 ANKLE2Q86XL3 938 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 ANKRD50Q9ULJ7 1429 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 TNNT1P13805 278 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 CTNNA2P26232 953 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 HOOK3Q86VS8 718 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
KLHL3-207ENST00000506491 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13□□□□□ -0.33
KLHL3-207ENST00000506491 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 UQCRHLA0A096LP55 91 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 UQCRHP07919 91 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 DNA2P51530 1060 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
KLHL3-207ENST00000506491 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
KLHL3-207ENST00000506491 IFIT1P09914 478 aaKnown RBP12.99□□□□□ -0.33
KLHL3-207ENST00000506491 CASQ1P31415 396 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 CRACR2AQ9BSW2 395 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 TMEM266Q2M3C6 531 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 BCCIPQ9P287 314 aaKnown RBP eCLIP12.99□□□□□ -0.33
KLHL3-207ENST00000506491 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 USP8P40818 1118 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
KLHL3-207ENST00000506491 ERICH4A6NGS2 130 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
KLHL3-207ENST00000506491 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
KLHL3-207ENST00000506491 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 NAPBQ9H115 298 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 SLC12A5Q9H2X9 1139 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
KLHL3-207ENST00000506491 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
KLHL3-207ENST00000506491 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
KLHL3-207ENST00000506491 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 ATF7IPQ6VMQ6 1270 aa12.98□□□□□ -0.33
KLHL3-207ENST00000506491 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
KLHL3-207ENST00000506491 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 TRMT1LQ7Z2T5 733 aaKnown RBP12.97□□□□□ -0.33
KLHL3-207ENST00000506491 RAB34Q9BZG1 259 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 GRPEL1Q9HAV7 217 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 TMCO3Q6UWJ1 677 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 AFAP1Q8N556 730 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
KLHL3-207ENST00000506491 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
KLHL3-207ENST00000506491 MYD88Q99836 296 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 SHTN1A0MZ66 631 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 TTC16Q8NEE8 873 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 GIMAP7Q8NHV1 300 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
KLHL3-207ENST00000506491 KIF5CO60282 957 aa12.96□□□□□ -0.33
KLHL3-207ENST00000506491 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
KLHL3-207ENST00000506491 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
KLHL3-207ENST00000506491 UBXN4Q92575 508 aa12.96□□□□□ -0.33
KLHL3-207ENST00000506491 SLC5A1P13866 664 aa12.96□□□□□ -0.34
KLHL3-207ENST00000506491 CCDC82Q8N4S0 544 aa12.96□□□□□ -0.34
KLHL3-207ENST00000506491 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.34
KLHL3-207ENST00000506491 NLRP5P59047 1200 aa12.96□□□□□ -0.34
KLHL3-207ENST00000506491 TDRD12Q587J7 1177 aaKnown RBP12.96□□□□□ -0.34
KLHL3-207ENST00000506491 GBP3Q9H0R5 595 aa12.96□□□□□ -0.34
KLHL3-207ENST00000506491 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.34
KLHL3-207ENST00000506491 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
KLHL3-207ENST00000506491 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 SLC12A7Q9Y666 1083 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 WDR63Q8IWG1 891 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-207ENST00000506491 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 SPTY2D1Q68D10 685 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-207ENST00000506491 FEZ1Q99689 392 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 TMX1Q9H3N1 280 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
KLHL3-207ENST00000506491 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
KLHL3-207ENST00000506491 PUF60Q9UHX1 559 aaKnown RBP12.95□□□□□ -0.34
KLHL3-207ENST00000506491 ZSCAN12O43309 604 aa12.94□□□□□ -0.34
KLHL3-207ENST00000506491 BOLA2Q9H3K6 86 aa12.94□□□□□ -0.34
KLHL3-207ENST00000506491 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
KLHL3-207ENST00000506491 SMC1AQ14683 1233 aaKnown RBP12.94□□□□□ -0.34
KLHL3-207ENST00000506491 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
KLHL3-207ENST00000506491 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
KLHL3-207ENST00000506491 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms