RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 WDR63Q8IWG1 891 aa14.56□□□□□ -0.08
ITGA3-208ENST00000506437 COL22A1Q8NFW1 1626 aaPredicted RBP14.56□□□□□ -0.08
ITGA3-208ENST00000506437 PRAMEF22A3QJZ6 481 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 PHKG2P15735 406 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 CCDC27Q2M243 656 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 ZNF428Q96B54 188 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 FAM208AQ9UK61 1670 aaKnown RBP14.55□□□□□ -0.08
ITGA3-208ENST00000506437 TEFQ10587 303 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 CHMP4BQ9H444 224 aaKnown RBP14.55□□□□□ -0.08
ITGA3-208ENST00000506437 BCL9LQ86UU0 1499 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 PLCH1Q4KWH8 1693 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 PDE3BQ13370 1112 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 C20orf194Q5TEA3 1177 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
ITGA3-208ENST00000506437 SPATA31A1Q5TZJ5 1347 aa14.54□□□□□ -0.08
ITGA3-208ENST00000506437 AKAP4Q5JQC9 854 aa14.54□□□□□ -0.08
ITGA3-208ENST00000506437 RNMTO43148 476 aaKnown RBP14.54□□□□□ -0.08
ITGA3-208ENST00000506437 PIP4K2AP48426 406 aaPredicted RBP14.53□□□□□ -0.08
ITGA3-208ENST00000506437 CLUAP1Q96AJ1 413 aa14.53□□□□□ -0.08
ITGA3-208ENST00000506437 SPATA31A6Q5VVP1 1343 aa14.53□□□□□ -0.08
ITGA3-208ENST00000506437 PDE4AP27815 886 aa14.53□□□□□ -0.08
ITGA3-208ENST00000506437 AMOTQ4VCS5 1084 aa14.53□□□□□ -0.08
ITGA3-208ENST00000506437 TRMT2AQ8IZ69 625 aaKnown RBP14.53□□□□□ -0.08
ITGA3-208ENST00000506437 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
ITGA3-208ENST00000506437 MYH16Q9H6N6 1097 aa14.53□□□□□ -0.08
ITGA3-208ENST00000506437 COL14A1Q05707 1796 aaKnown RBP14.53□□□□□ -0.08
ITGA3-208ENST00000506437 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.08
ITGA3-208ENST00000506437 SKAP1Q86WV1 359 aa14.52□□□□□ -0.08
ITGA3-208ENST00000506437 CFAP44Q96MT7 982 aa14.52□□□□□ -0.08
ITGA3-208ENST00000506437 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.08
ITGA3-208ENST00000506437 PAXIP1Q6ZW49 1069 aaPredicted RBP14.52□□□□□ -0.08
ITGA3-208ENST00000506437 PTF1AQ7RTS3 328 aa14.52□□□□□ -0.08
ITGA3-208ENST00000506437 BBXQ8WY36 941 aaPredicted RBP14.52□□□□□ -0.08
ITGA3-208ENST00000506437 BTBD11A6QL63 1104 aa14.52□□□□□ -0.09
ITGA3-208ENST00000506437 EXOC5O00471 708 aa14.52□□□□□ -0.09
ITGA3-208ENST00000506437 ANXA1P04083 346 aa14.52□□□□□ -0.09
ITGA3-208ENST00000506437 EIF2S2P20042 333 aaKnown RBP14.52□□□□□ -0.09
ITGA3-208ENST00000506437 SPATA31A5Q5VU36 1347 aa14.52□□□□□ -0.09
ITGA3-208ENST00000506437 SPATA31A7Q8IWB4 1347 aa14.52□□□□□ -0.09
ITGA3-208ENST00000506437 DDB1Q16531 1140 aa14.51□□□□□ -0.09
ITGA3-208ENST00000506437 PTCD1O75127 700 aaKnown RBP14.51□□□□□ -0.09
ITGA3-208ENST00000506437 GNAI1P63096 354 aa14.51□□□□□ -0.09
ITGA3-208ENST00000506437 SLIT2O94813 1529 aa14.51□□□□□ -0.09
ITGA3-208ENST00000506437 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
ITGA3-208ENST00000506437 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
ITGA3-208ENST00000506437 TAF7Q15545 349 aaPredicted RBP14.5□□□□□ -0.09
ITGA3-208ENST00000506437 IFT57Q9NWB7 429 aa14.5□□□□□ -0.09
ITGA3-208ENST00000506437 CHL1O00533 1208 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 KCNQ2O43526 872 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 ZNF853P0CG23 659 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 KCNQ4P56696 695 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 TWISTNBQ3B726 338 aaPredicted RBP14.49□□□□□ -0.09
ITGA3-208ENST00000506437 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 UTRNP46939 3433 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 CABP4P57796 275 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 MARCH10Q8NA82 808 aaPredicted RBP14.49□□□□□ -0.09
ITGA3-208ENST00000506437 SSH1Q8WYL5 1049 aa14.49□□□□□ -0.09
ITGA3-208ENST00000506437 NCAPD2Q15021 1401 aa14.48□□□□□ -0.09
ITGA3-208ENST00000506437 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
ITGA3-208ENST00000506437 CANXP27824 592 aaKnown RBP14.48□□□□□ -0.09
ITGA3-208ENST00000506437 FBXO41Q8TF61 875 aa14.48□□□□□ -0.09
ITGA3-208ENST00000506437 SMC4Q9NTJ3 1288 aa14.48□□□□□ -0.09
ITGA3-208ENST00000506437 PCDH11XQ9BZA7 1347 aa14.48□□□□□ -0.09
ITGA3-208ENST00000506437 PCDH11YQ9BZA8 1340 aa14.48□□□□□ -0.09
ITGA3-208ENST00000506437 PRIM1P49642 420 aaKnown RBP14.47□□□□□ -0.09
ITGA3-208ENST00000506437 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
ITGA3-208ENST00000506437 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
ITGA3-208ENST00000506437 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
ITGA3-208ENST00000506437 VAMP4O75379 141 aa14.46□□□□□ -0.09
ITGA3-208ENST00000506437 VPS72Q15906 364 aa14.46□□□□□ -0.09
ITGA3-208ENST00000506437 NGEFQ8N5V2 710 aa14.46□□□□□ -0.09
ITGA3-208ENST00000506437 PANK1Q8TE04 598 aa14.46□□□□□ -0.09
ITGA3-208ENST00000506437 ASAP1Q9ULH1 1129 aa14.46□□□□□ -0.09
ITGA3-208ENST00000506437 RRP1P56182 461 aaKnown RBP14.46□□□□□ -0.09
ITGA3-208ENST00000506437 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.09
ITGA3-208ENST00000506437 DCAF5Q96JK2 942 aa14.45□□□□□ -0.1
ITGA3-208ENST00000506437 NRAPQ86VF7 1730 aa14.45□□□□□ -0.1
ITGA3-208ENST00000506437 ARID3AQ99856 593 aa14.45□□□□□ -0.1
ITGA3-208ENST00000506437 VIRMAQ69YN4 1812 aaKnown RBP14.45□□□□□ -0.1
ITGA3-208ENST00000506437 CALD1Q05682 793 aaKnown RBP14.45□□□□□ -0.1
ITGA3-208ENST00000506437 CEMIPQ8WUJ3 1361 aa14.44□□□□□ -0.1
ITGA3-208ENST00000506437 ZNF496Q96IT1 587 aaPredicted RBP14.44□□□□□ -0.1
ITGA3-208ENST00000506437 BACH2Q9BYV9 841 aa14.44□□□□□ -0.1
ITGA3-208ENST00000506437 ZHX1Q9UKY1 873 aaPredicted RBP14.44□□□□□ -0.1
ITGA3-208ENST00000506437 SEPT12Q8IYM1 358 aa14.44□□□□□ -0.1
ITGA3-208ENST00000506437 PIGBQ92521 554 aa14.44□□□□□ -0.1
ITGA3-208ENST00000506437 GTF2E1P29083 439 aaPredicted RBP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 EXOC6Q8TAG9 804 aa14.43□□□□□ -0.1
ITGA3-208ENST00000506437 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 IL16Q14005 1332 aa14.43□□□□□ -0.1
ITGA3-208ENST00000506437 G2E3Q7L622 706 aa14.43□□□□□ -0.1
ITGA3-208ENST00000506437 RLBP1P12271 317 aa14.43□□□□□ -0.1
ITGA3-208ENST00000506437 ZNF790Q6PG37 636 aa14.43□□□□□ -0.1
ITGA3-208ENST00000506437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 RGS17Q9UGC6 210 aaPredicted RBP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 TRPC5Q9UL62 973 aaPredicted RBP14.43□□□□□ -0.1
ITGA3-208ENST00000506437 EIF4A1P60842 406 aaKnown RBP14.42□□□□□ -0.1
ITGA3-208ENST00000506437 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms