RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PCDHGA11Q9Y5H2 935 aa5.35□□□□□ -1.55
TRAPPC11-205ENST00000506426 RC3H1Q5TC82 1133 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 TAS1R3Q7RTX0 852 aa5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 TRIM46Q7Z4K8 759 aa5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 KCTD15Q96SI1 283 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 SENP2Q9HC62 589 aa5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 CXXC1Q9P0U4 656 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 BIN2Q9UBW5 565 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-205ENST00000506426 M0R2N6 131 aa5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 ALDH1A1P00352 501 aa5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 VARSP26640 1264 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 RAB15P59190 212 aa5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 OCLNQ16625 522 aa5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 ZSCAN1Q8NBB4 408 aa5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 NXF1Q9UBU9 619 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 EGFL7Q9UHF1 273 aa5.33□□□□□ -1.56
TRAPPC11-205ENST00000506426 ABL1P00519 1130 aa5.32□□□□□ -1.56
TRAPPC11-205ENST00000506426 SCNN1AP37088 669 aa5.32□□□□□ -1.56
TRAPPC11-205ENST00000506426 MARSP56192 900 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-205ENST00000506426 VASH1Q7L8A9 365 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-205ENST00000506426 MAP4K5Q9Y4K4 846 aa5.32□□□□□ -1.56
TRAPPC11-205ENST00000506426 RBM47A0AV96 593 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-205ENST00000506426 ERVH48-1M5A8F1 160 aa5.31□□□□□ -1.56
TRAPPC11-205ENST00000506426 WNT7BP56706 349 aa5.31□□□□□ -1.56
TRAPPC11-205ENST00000506426 DNAJC14Q6Y2X3 702 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-205ENST00000506426 ICMTO60725 284 aa5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 PTCD1O75127 700 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 LGR5O75473 907 aa5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 WEE1P30291 646 aa5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 SUZ12Q15022 739 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 GLYCTKQ8IVS8 523 aa5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 TSEN2Q8NCE0 465 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 SLC16A10Q8TF71 515 aa5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 KIFC2Q96AC6 838 aa5.3□□□□□ -1.56
TRAPPC11-205ENST00000506426 SOBPA7XYQ1 873 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 H3BRB1 525 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 BACH1O14867 736 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 DHX9Q08211 1270 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 ARID5BQ14865 1188 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 CC2D2BQ6DHV5 1058 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 EHBP1Q8NDI1 1231 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 GTF3C2Q8WUA4 911 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 TUT1Q9H6E5 874 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 ZNF358Q9NW07 568 aa5.29□□□□□ -1.56
TRAPPC11-205ENST00000506426 H3BM21 787 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 CAPN5O15484 640 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 SIAH2O43255 324 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 IGFBP4P22692 258 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 SCTRP47872 440 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 ERVK-9P63128 1117 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 FKBP4Q02790 459 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 ZNF211Q13398 564 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 SF3B2Q13435 895 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 IRF7Q92985 503 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 COL26A1Q96A83 441 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 CDK15Q96Q40 435 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 MKNK1Q9BUB5 465 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 ANO2Q9NQ90 1003 aa5.28□□□□□ -1.56
TRAPPC11-205ENST00000506426 ANKRD33BA6NCL7 494 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 TMEM229AB2RXF0 380 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 FOXO3O43524 673 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 C21orf2O43822 256 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 FKBP5Q13451 457 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 GAS2L2Q8NHY3 880 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 ZFP42Q96MM3 310 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 BCL2L13Q9BXK5 485 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 SEPT3Q9UH03 358 aa5.27□□□□□ -1.57
TRAPPC11-205ENST00000506426 FAM181BA6NEQ2 426 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 UNCXA6NJT0 531 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 WASLO00401 505 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 GDF10P55107 478 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 NOM1Q5C9Z4 860 aaKnown RBP5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 MPNDQ8N594 471 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 SCG3Q8WXD2 468 aaKnown RBP5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 VTI1AQ96AJ9 217 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 OSBPL3Q9H4L5 887 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 CYLDQ9NQC7 956 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 DCTN4Q9UJW0 460 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 DNMT3AQ9Y6K1 912 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 ATAD2Q6PL18 1390 aa5.26□□□□□ -1.57
TRAPPC11-205ENST00000506426 INHAP05111 366 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 ZNF16P17020 682 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 FSHRP23945 695 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 MAPK1P28482 360 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 GRM5P41594 1212 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 SCNN1DP51172 638 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 NAA30Q147X3 362 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 ZNF326Q5BKZ1 582 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 ESCO1Q5FWF5 840 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 CYP2U1Q7Z449 544 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 ZSCAN29Q8IWY8 852 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 TNS4Q8IZW8 715 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 TMPRSS4Q9NRS4 437 aa5.25□□□□□ -1.57
TRAPPC11-205ENST00000506426 GNRH1P01148 92 aa5.24□□□□□ -1.57
TRAPPC11-205ENST00000506426 GSK3AP49840 483 aa5.24□□□□□ -1.57
TRAPPC11-205ENST00000506426 NR5A1Q13285 461 aa5.24□□□□□ -1.57
TRAPPC11-205ENST00000506426 CAPN12Q6ZSI9 719 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms