RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
RCN1-202ENST00000506388 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
RCN1-202ENST00000506388 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
RCN1-202ENST00000506388 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
RCN1-202ENST00000506388 NHSQ6T4R5 1651 aa17.39■□□□□ 0.38
RCN1-202ENST00000506388 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
RCN1-202ENST00000506388 A0A0G2JS52 829 aa17.39■□□□□ 0.37
RCN1-202ENST00000506388 MYT1Q01538 1121 aa17.39■□□□□ 0.37
RCN1-202ENST00000506388 KAT6BQ8WYB5 2073 aa17.38■□□□□ 0.37
RCN1-202ENST00000506388 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
RCN1-202ENST00000506388 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
RCN1-202ENST00000506388 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
RCN1-202ENST00000506388 CABP4P57796 275 aa17.37■□□□□ 0.37
RCN1-202ENST00000506388 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
RCN1-202ENST00000506388 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
RCN1-202ENST00000506388 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
RCN1-202ENST00000506388 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
RCN1-202ENST00000506388 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
RCN1-202ENST00000506388 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
RCN1-202ENST00000506388 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
RCN1-202ENST00000506388 TMOD3Q9NYL9 352 aa17.35■□□□□ 0.37
RCN1-202ENST00000506388 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
RCN1-202ENST00000506388 ZNF831Q5JPB2 1677 aa17.34■□□□□ 0.37
RCN1-202ENST00000506388 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
RCN1-202ENST00000506388 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.37
RCN1-202ENST00000506388 ZNF790Q6PG37 636 aa17.33■□□□□ 0.37
RCN1-202ENST00000506388 PIGBQ92521 554 aa17.33■□□□□ 0.37
RCN1-202ENST00000506388 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.37
RCN1-202ENST00000506388 CICQ96RK0 1608 aaPredicted RBP17.33■□□□□ 0.36
RCN1-202ENST00000506388 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
RCN1-202ENST00000506388 BTAF1O14981 1849 aa17.32■□□□□ 0.36
RCN1-202ENST00000506388 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
RCN1-202ENST00000506388 EP400Q96L91 3159 aa17.31■□□□□ 0.36
RCN1-202ENST00000506388 HOXB7P09629 217 aa17.3■□□□□ 0.36
RCN1-202ENST00000506388 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
RCN1-202ENST00000506388 KCPQ6ZWJ8 1503 aa17.3■□□□□ 0.36
RCN1-202ENST00000506388 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
RCN1-202ENST00000506388 TSR2Q969E8 191 aaKnown RBP17.29■□□□□ 0.36
RCN1-202ENST00000506388 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
RCN1-202ENST00000506388 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
RCN1-202ENST00000506388 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
RCN1-202ENST00000506388 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
RCN1-202ENST00000506388 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
RCN1-202ENST00000506388 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
RCN1-202ENST00000506388 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
RCN1-202ENST00000506388 LY75O60449 1722 aa17.28■□□□□ 0.36
RCN1-202ENST00000506388 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.36
RCN1-202ENST00000506388 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.36
RCN1-202ENST00000506388 KCNQ2O43526 872 aa17.27■□□□□ 0.36
RCN1-202ENST00000506388 TTC5Q8N0Z6 440 aa17.27■□□□□ 0.36
RCN1-202ENST00000506388 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
RCN1-202ENST00000506388 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
RCN1-202ENST00000506388 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
RCN1-202ENST00000506388 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
RCN1-202ENST00000506388 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
RCN1-202ENST00000506388 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
RCN1-202ENST00000506388 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
RCN1-202ENST00000506388 ASAP1Q9ULH1 1129 aa17.26■□□□□ 0.35
RCN1-202ENST00000506388 TNS1Q9HBL0 1735 aaKnown RBP17.25■□□□□ 0.35
RCN1-202ENST00000506388 KCNQ3O43525 872 aa17.25■□□□□ 0.35
RCN1-202ENST00000506388 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
RCN1-202ENST00000506388 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
RCN1-202ENST00000506388 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
RCN1-202ENST00000506388 VAMP4O75379 141 aa17.24■□□□□ 0.35
RCN1-202ENST00000506388 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
RCN1-202ENST00000506388 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
RCN1-202ENST00000506388 C5P01031 1676 aa17.23■□□□□ 0.35
RCN1-202ENST00000506388 SNRPA1P09661 255 aaKnown RBP17.23■□□□□ 0.35
RCN1-202ENST00000506388 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
RCN1-202ENST00000506388 PLSCR1O15162 318 aa17.22■□□□□ 0.35
RCN1-202ENST00000506388 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
RCN1-202ENST00000506388 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
RCN1-202ENST00000506388 TJP1Q07157 1748 aa17.22■□□□□ 0.35
RCN1-202ENST00000506388 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
RCN1-202ENST00000506388 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
RCN1-202ENST00000506388 PTF1AQ7RTS3 328 aa17.21■□□□□ 0.35
RCN1-202ENST00000506388 COL5A3P25940 1745 aaPredicted RBP17.21■□□□□ 0.34
RCN1-202ENST00000506388 TRIM37O94972 964 aa17.2■□□□□ 0.34
RCN1-202ENST00000506388 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
RCN1-202ENST00000506388 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
RCN1-202ENST00000506388 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
RCN1-202ENST00000506388 LOC102724428A0A0B4J2F2 783 aa17.19■□□□□ 0.34
RCN1-202ENST00000506388 SIK1P57059 783 aa17.19■□□□□ 0.34
RCN1-202ENST00000506388 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
RCN1-202ENST00000506388 SLC4A9Q96Q91 983 aa17.18■□□□□ 0.34
RCN1-202ENST00000506388 RREB1Q92766 1687 aa17.18■□□□□ 0.34
RCN1-202ENST00000506388 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
RCN1-202ENST00000506388 RARSP54136 660 aaKnown RBP17.17■□□□□ 0.34
RCN1-202ENST00000506388 SLC27A3Q5K4L6 730 aa17.17■□□□□ 0.34
RCN1-202ENST00000506388 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
RCN1-202ENST00000506388 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
RCN1-202ENST00000506388 ELL2O00472 640 aaPredicted RBP17.16■□□□□ 0.34
RCN1-202ENST00000506388 STARD3NLO95772 234 aa17.15■□□□□ 0.34
RCN1-202ENST00000506388 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
RCN1-202ENST00000506388 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
RCN1-202ENST00000506388 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
RCN1-202ENST00000506388 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
RCN1-202ENST00000506388 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
RCN1-202ENST00000506388 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
RCN1-202ENST00000506388 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms