RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 PRPF40BQ6NWY9 871 aaKnown RBP18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 DAPK1P53355 1430 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 ZPR1O75312 459 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 CCDC83Q8IWF9 413 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 CRACR2BQ8N4Y2 399 aaPredicted RBP18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 CAMK4Q16566 473 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 RAB11FIP3O75154 756 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 TAF4BQ92750 862 aa18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 CIZ1Q9ULV3 898 aaPredicted RBP18.98■□□□□ 0.63
SH3TC1-210ENST00000506360 IFIT1P09914 478 aaKnown RBP18.97■□□□□ 0.63
SH3TC1-210ENST00000506360 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
SH3TC1-210ENST00000506360 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
SH3TC1-210ENST00000506360 MAP3K11Q16584 847 aa18.97■□□□□ 0.63
SH3TC1-210ENST00000506360 LARP1Q6PKG0 1096 aaKnown RBP18.97■□□□□ 0.63
SH3TC1-210ENST00000506360 CFAP100Q494V2 611 aa18.97■□□□□ 0.63
SH3TC1-210ENST00000506360 GLRX3O76003 335 aaKnown RBP18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 BOLA2Q9H3K6 86 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 JAKMIP3Q5VZ66 844 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 TNIP1Q15025 636 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 FERMT3Q86UX7 667 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 USHBP1Q8N6Y0 703 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 ZNF397Q8NF99 534 aaPredicted RBP18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 ANKIB1Q9P2G1 1089 aa18.96■□□□□ 0.63
SH3TC1-210ENST00000506360 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 PDIA4P13667 645 aaKnown RBP18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 GBP2P32456 591 aaPredicted RBP18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 PPP1R12BO60237 982 aaPredicted RBP18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 ARHGAP29Q52LW3 1261 aa18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 WAPLQ7Z5K2 1190 aa18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 NAPBQ9H115 298 aa18.95■□□□□ 0.62
SH3TC1-210ENST00000506360 GOLGA6L7A0A1B0GV03 622 aa18.94■□□□□ 0.62
SH3TC1-210ENST00000506360 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
SH3TC1-210ENST00000506360 DZIP1Q86YF9 867 aaKnown RBP18.94■□□□□ 0.62
SH3TC1-210ENST00000506360 MCM4P33991 863 aa18.94■□□□□ 0.62
SH3TC1-210ENST00000506360 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
SH3TC1-210ENST00000506360 EZRP15311 586 aaKnown RBP18.93■□□□□ 0.62
SH3TC1-210ENST00000506360 UQCRHLA0A096LP55 91 aa18.93■□□□□ 0.62
SH3TC1-210ENST00000506360 SYCE3A1L190 88 aa18.93■□□□□ 0.62
SH3TC1-210ENST00000506360 UQCRHP07919 91 aa18.93■□□□□ 0.62
SH3TC1-210ENST00000506360 TRIM21P19474 475 aaKnown RBP18.93■□□□□ 0.62
SH3TC1-210ENST00000506360 CCDC184Q52MB2 194 aa18.93■□□□□ 0.62
SH3TC1-210ENST00000506360 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
SH3TC1-210ENST00000506360 SCLT1Q96NL6 688 aa18.92■□□□□ 0.62
SH3TC1-210ENST00000506360 CCDC148Q8NFR7 591 aa18.92■□□□□ 0.62
SH3TC1-210ENST00000506360 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
SH3TC1-210ENST00000506360 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
SH3TC1-210ENST00000506360 IFIT5Q13325 482 aaKnown RBP18.92■□□□□ 0.62
SH3TC1-210ENST00000506360 CHMP4BP1P59074 171 aa18.91■□□□□ 0.62
SH3TC1-210ENST00000506360 CCDC102AQ96A19 550 aa18.91■□□□□ 0.62
SH3TC1-210ENST00000506360 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
SH3TC1-210ENST00000506360 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
SH3TC1-210ENST00000506360 CTCFLQ8NI51 663 aaPredicted RBP18.91■□□□□ 0.62
SH3TC1-210ENST00000506360 SUPT6HQ7KZ85 1726 aaKnown RBP18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 KLHL10Q6JEL2 608 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 TSG101Q99816 390 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 CCDC196A0A1B0GTZ2 297 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 SLC5A1P13866 664 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 CCDC96Q2M329 555 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 UBA5Q9GZZ9 404 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 CCDC8Q9H0W5 538 aaPredicted RBP18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 TRMT112Q9UI30 125 aaKnown RBP18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 PPP4R3AQ6IN85 833 aa18.9■□□□□ 0.62
SH3TC1-210ENST00000506360 SPA17Q15506 151 aa18.89■□□□□ 0.62
SH3TC1-210ENST00000506360 DHX37Q8IY37 1157 aaKnown RBP18.89■□□□□ 0.62
SH3TC1-210ENST00000506360 FKBP15Q5T1M5 1219 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 ZNF444Q8N0Y2 327 aaPredicted RBP18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 C8orf76Q96K31 380 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 TAF3Q5VWG9 929 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 NME9Q86XW9 330 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 ALDH1L2Q3SY69 923 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 CCDC82Q8N4S0 544 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 SLC12A7Q9Y666 1083 aa18.89■□□□□ 0.61
SH3TC1-210ENST00000506360 GUCY1B3Q02153 619 aa18.88■□□□□ 0.61
SH3TC1-210ENST00000506360 F6X3S4 739 aa18.88■□□□□ 0.61
SH3TC1-210ENST00000506360 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
SH3TC1-210ENST00000506360 CETN2P41208 172 aa18.88■□□□□ 0.61
SH3TC1-210ENST00000506360 ZNF213O14771 459 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 IQCA1Q86XH1 822 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 NESP48681 1621 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 RPGRQ92834 1020 aaKnown RBP18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 CUL5Q93034 780 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 PHAXQ9H814 394 aaKnown RBP18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 CACNA2D4Q7Z3S7 1137 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 ANO10Q9NW15 660 aa18.87■□□□□ 0.61
SH3TC1-210ENST00000506360 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 HMGB1P09429 215 aaKnown RBP18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 DNAAF4Q8WXU2 420 aa18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 ADAMTS2O95450 1211 aa18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 SH2B1Q9NRF2 756 aaPredicted RBP18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 SFPQP23246 707 aaKnown RBP eCLIP18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 IL27Q8NEV9 243 aa18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 DNAI2Q9GZS0 605 aa18.86■□□□□ 0.61
SH3TC1-210ENST00000506360 SSRP1Q08945 709 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms