RNA–Protein interactions for RNA: ENST00000506222.6

LINC01016-201, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 2 BASIC

Gene LINC01016, Length 3,151 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-201ENST00000506222 SMIM5Q71RC9 77 aa15.05■□□□□ -0
LINC01016-201ENST00000506222 RGPD2P0DJD1 1756 aa15.04■□□□□ -0
LINC01016-201ENST00000506222 CRB1P82279 1406 aa15.04■□□□□ -0
LINC01016-201ENST00000506222 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
LINC01016-201ENST00000506222 TTC5Q8N0Z6 440 aa15.03■□□□□ -0
LINC01016-201ENST00000506222 RTL1A6NKG5 1358 aa15.03■□□□□ -0
LINC01016-201ENST00000506222 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
LINC01016-201ENST00000506222 ASAP1Q9ULH1 1129 aa15.03■□□□□ -0
LINC01016-201ENST00000506222 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
LINC01016-201ENST00000506222 PTF1AQ7RTS3 328 aa15.02■□□□□ -0
LINC01016-201ENST00000506222 TSHZ2Q9NRE2 1034 aa15.02■□□□□ -0
LINC01016-201ENST00000506222 NPM2Q86SE8 214 aaKnown RBP15.02□□□□□ -0.01
LINC01016-201ENST00000506222 LTN1O94822 1766 aa15.02□□□□□ -0.01
LINC01016-201ENST00000506222 EXOC5O00471 708 aa15.01□□□□□ -0.01
LINC01016-201ENST00000506222 RGPD5Q99666 1765 aa15.01□□□□□ -0.01
LINC01016-201ENST00000506222 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
LINC01016-201ENST00000506222 ZNF790Q6PG37 636 aa15.01□□□□□ -0.01
LINC01016-201ENST00000506222 KCNQ2O43526 872 aa15.01□□□□□ -0.01
LINC01016-201ENST00000506222 FLIIQ13045 1269 aa15□□□□□ -0.01
LINC01016-201ENST00000506222 PDE3AQ14432 1141 aa15□□□□□ -0.01
LINC01016-201ENST00000506222 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
LINC01016-201ENST00000506222 MEIS3Q99687 375 aa15□□□□□ -0.01
LINC01016-201ENST00000506222 CARD10Q9BWT7 1032 aa15□□□□□ -0.01
LINC01016-201ENST00000506222 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
LINC01016-201ENST00000506222 A1BGP04217 495 aa15□□□□□ -0.01
LINC01016-201ENST00000506222 PI4KAP2A4QPH2 592 aa14.99□□□□□ -0.01
LINC01016-201ENST00000506222 PI4KAP1Q8N8J0 262 aa14.99□□□□□ -0.01
LINC01016-201ENST00000506222 MARF1Q9Y4F3 1742 aaKnown RBP14.99□□□□□ -0.01
LINC01016-201ENST00000506222 CCDC30Q5VVM6 783 aa14.98□□□□□ -0.01
LINC01016-201ENST00000506222 LTBP4Q8N2S1 1624 aa14.98□□□□□ -0.01
LINC01016-201ENST00000506222 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
LINC01016-201ENST00000506222 ROBO1Q9Y6N7 1651 aa14.98□□□□□ -0.01
LINC01016-201ENST00000506222 KIF16BQ96L93 1317 aa14.98□□□□□ -0.01
LINC01016-201ENST00000506222 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
LINC01016-201ENST00000506222 USP21Q9UK80 565 aa14.97□□□□□ -0.01
LINC01016-201ENST00000506222 DDB1Q16531 1140 aa14.97□□□□□ -0.01
LINC01016-201ENST00000506222 CWF19L2Q2TBE0 894 aaKnown RBP14.97□□□□□ -0.01
LINC01016-201ENST00000506222 DCAF5Q96JK2 942 aa14.97□□□□□ -0.01
LINC01016-201ENST00000506222 ATP5J2-PTCD1G3V325 749 aa14.97□□□□□ -0.01
LINC01016-201ENST00000506222 TRPM3Q9HCF6 1732 aaPredicted RBP14.97□□□□□ -0.01
LINC01016-201ENST00000506222 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
LINC01016-201ENST00000506222 PIGBQ92521 554 aa14.96□□□□□ -0.01
LINC01016-201ENST00000506222 COL5A2P05997 1499 aaPredicted RBP14.96□□□□□ -0.01
LINC01016-201ENST00000506222 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.01
LINC01016-201ENST00000506222 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
LINC01016-201ENST00000506222 SLIT3O75094 1523 aa14.95□□□□□ -0.02
LINC01016-201ENST00000506222 CPDO75976 1380 aa14.95□□□□□ -0.02
LINC01016-201ENST00000506222 DLG5Q8TDM6 1919 aa14.95□□□□□ -0.02
LINC01016-201ENST00000506222 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
LINC01016-201ENST00000506222 HTATSF1O43719 755 aaKnown RBP14.95□□□□□ -0.02
LINC01016-201ENST00000506222 COPS6Q7L5N1 327 aa14.94□□□□□ -0.02
LINC01016-201ENST00000506222 ZBTB3Q9H5J0 574 aa14.94□□□□□ -0.02
LINC01016-201ENST00000506222 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
LINC01016-201ENST00000506222 KDM6AO15550 1401 aaPredicted RBP14.94□□□□□ -0.02
LINC01016-201ENST00000506222 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
LINC01016-201ENST00000506222 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
LINC01016-201ENST00000506222 ERICH6BQ5W0A0 696 aa14.93□□□□□ -0.02
LINC01016-201ENST00000506222 MARCH10Q8NA82 808 aaPredicted RBP14.93□□□□□ -0.02
LINC01016-201ENST00000506222 XAGE3Q8WTP9 111 aa14.93□□□□□ -0.02
LINC01016-201ENST00000506222 SMARCA5O60264 1052 aaPredicted RBP14.92□□□□□ -0.02
LINC01016-201ENST00000506222 DNAJC10Q8IXB1 793 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 API5Q9BZZ5 524 aaKnown RBP14.92□□□□□ -0.02
LINC01016-201ENST00000506222 MAP3K2Q9Y2U5 619 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 CEMIPQ8WUJ3 1361 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 KIF1AQ12756 1690 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 CT47B1P0C2W7 299 aaPredicted RBP14.92□□□□□ -0.02
LINC01016-201ENST00000506222 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 ZBTB40Q9NUA8 1239 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 ALS2Q96Q42 1657 aa14.92□□□□□ -0.02
LINC01016-201ENST00000506222 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
LINC01016-201ENST00000506222 NBPF7P0C2Y1 421 aaPredicted RBP14.91□□□□□ -0.02
LINC01016-201ENST00000506222 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
LINC01016-201ENST00000506222 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
LINC01016-201ENST00000506222 SIRT2Q8IXJ6 389 aa14.9□□□□□ -0.02
LINC01016-201ENST00000506222 C16orf71Q8IYS4 520 aaPredicted RBP14.9□□□□□ -0.02
LINC01016-201ENST00000506222 TSHZ3Q63HK5 1081 aa14.89□□□□□ -0.03
LINC01016-201ENST00000506222 FMNL2Q96PY5 1086 aa14.89□□□□□ -0.03
LINC01016-201ENST00000506222 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
LINC01016-201ENST00000506222 RBM19Q9Y4C8 960 aaKnown RBP14.89□□□□□ -0.03
LINC01016-201ENST00000506222 AFF2P51816 1311 aa14.89□□□□□ -0.03
LINC01016-201ENST00000506222 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
LINC01016-201ENST00000506222 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
LINC01016-201ENST00000506222 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
LINC01016-201ENST00000506222 TBC1D2BQ9UPU7 963 aa14.88□□□□□ -0.03
LINC01016-201ENST00000506222 LRRFIP2Q9Y608 721 aaKnown RBP14.88□□□□□ -0.03
LINC01016-201ENST00000506222 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
LINC01016-201ENST00000506222 MYD88Q99836 296 aa14.88□□□□□ -0.03
LINC01016-201ENST00000506222 RWDD1Q9H446 243 aaPredicted RBP14.88□□□□□ -0.03
LINC01016-201ENST00000506222 GPTP24298 496 aa14.87□□□□□ -0.03
LINC01016-201ENST00000506222 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
LINC01016-201ENST00000506222 RGPD1P0DJD0 1748 aa14.87□□□□□ -0.03
LINC01016-201ENST00000506222 CENPQQ7L2Z9 268 aaPredicted RBP14.87□□□□□ -0.03
LINC01016-201ENST00000506222 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
LINC01016-201ENST00000506222 C9orf78Q9NZ63 289 aaPredicted RBP14.87□□□□□ -0.03
LINC01016-201ENST00000506222 NBPF26B4DH59 902 aa14.87□□□□□ -0.03
LINC01016-201ENST00000506222 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
LINC01016-201ENST00000506222 NBPF14Q5TI25 921 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms