RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 TANGO6Q9C0B7 1094 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 ZHX3Q9H4I2 956 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 RETREG1Q9H6L5 497 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 RNF17Q9BXT8 1623 aaKnown RBP10.86□□□□□ -0.67
HTT-203ENST00000506137 ZFYVE16Q7Z3T8 1539 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 GOLGA6L6A8MZA4 724 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 ERCC5P28715 1186 aaPredicted RBP10.85□□□□□ -0.67
HTT-203ENST00000506137 RGS3P49796 1198 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 PSMD2Q13200 908 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 DCTN1Q14203 1278 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 CCDC92Q53HC0 331 aaPredicted RBP10.85□□□□□ -0.67
HTT-203ENST00000506137 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 CADPS2Q86UW7 1296 aa10.85□□□□□ -0.67
HTT-203ENST00000506137 RANBP17Q9H2T7 1088 aaKnown RBP10.85□□□□□ -0.67
HTT-203ENST00000506137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.67
HTT-203ENST00000506137 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
HTT-203ENST00000506137 KIF1CO43896 1103 aaKnown RBP10.84□□□□□ -0.67
HTT-203ENST00000506137 EVA1CP58658 441 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 NT5DC4Q86YG4 428 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 SVIPQ8NHG7 77 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 ENOX1Q8TC92 643 aaKnown RBP10.84□□□□□ -0.67
HTT-203ENST00000506137 RSPH1Q8WYR4 309 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 TTC14Q96N46 770 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 CASS4Q9NQ75 786 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 SFMBT1Q9UHJ3 866 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 CTDP1Q9Y5B0 961 aaPredicted RBP10.84□□□□□ -0.67
HTT-203ENST00000506137 COL4A3BPQ9Y5P4 624 aa10.84□□□□□ -0.67
HTT-203ENST00000506137 PPM1EQ8WY54 764 aa10.83□□□□□ -0.68
HTT-203ENST00000506137 RELTQ969Z4 430 aa10.83□□□□□ -0.68
HTT-203ENST00000506137 NHSL1Q5SYE7 1610 aa10.83□□□□□ -0.68
HTT-203ENST00000506137 HMGN5P82970 282 aaKnown RBP10.82□□□□□ -0.68
HTT-203ENST00000506137 DHX8Q14562 1220 aaKnown RBP10.82□□□□□ -0.68
HTT-203ENST00000506137 KCTD2Q14681 263 aa10.82□□□□□ -0.68
HTT-203ENST00000506137 CCDC144BQ3MJ40 725 aa10.82□□□□□ -0.68
HTT-203ENST00000506137 DNTTIP2Q5QJE6 756 aaKnown RBP10.82□□□□□ -0.68
HTT-203ENST00000506137 BANK1Q8NDB2 785 aa10.82□□□□□ -0.68
HTT-203ENST00000506137 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
HTT-203ENST00000506137 ZMYM4Q5VZL5 1548 aa10.82□□□□□ -0.68
HTT-203ENST00000506137 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 COQ9O75208 318 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 HSD3B2P26439 372 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 UBE4AQ14139 1066 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 KRT77Q7Z794 578 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 LCA5Q86VQ0 697 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 LMNTD2Q8IXW0 634 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 IL17RAQ96F46 866 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 CEP89Q96ST8 783 aa10.81□□□□□ -0.68
HTT-203ENST00000506137 IPO8O15397 1037 aaKnown RBP10.8□□□□□ -0.68
HTT-203ENST00000506137 RGS20O76081 388 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 MPNDQ8N594 471 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 PAF1Q8N7H5 531 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 ACAD8Q9UKU7 415 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 FHOD3Q2V2M9 1422 aa10.8□□□□□ -0.68
HTT-203ENST00000506137 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
HTT-203ENST00000506137 PABPN1LA6NDY0 278 aaKnown RBP10.79□□□□□ -0.68
HTT-203ENST00000506137 PLIN1O60240 522 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 FGAP02671 866 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
HTT-203ENST00000506137 VPS72Q15906 364 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 SOGA3Q5TF21 947 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 FMNL3Q8IVF7 1028 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 REM2Q8IYK8 340 aaPredicted RBP10.79□□□□□ -0.68
HTT-203ENST00000506137 CCDC102AQ96A19 550 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 CCDC47Q96A33 483 aaKnown RBP10.79□□□□□ -0.68
HTT-203ENST00000506137 ZNF512BQ96KM6 892 aaPredicted RBP10.79□□□□□ -0.68
HTT-203ENST00000506137 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 TMX1Q9H3N1 280 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 PCDH12Q9NPG4 1184 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
HTT-203ENST00000506137 ABCA9Q8IUA7 1624 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 MAGI2Q86UL8 1455 aa10.79□□□□□ -0.68
HTT-203ENST00000506137 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 VIL1P09327 827 aaKnown RBP10.78□□□□□ -0.68
HTT-203ENST00000506137 AMHR2Q16671 573 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 FILIP1Q7Z7B0 1213 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 TTC30BQ8N4P2 665 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
HTT-203ENST00000506137 CXorf56Q9H5V9 222 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 CHMP3Q9Y3E7 222 aa10.78□□□□□ -0.68
HTT-203ENST00000506137 NUTM2BA6NNL0 878 aaPredicted RBP10.77□□□□□ -0.69
HTT-203ENST00000506137 NUTM2EB1AL46 878 aaPredicted RBP10.77□□□□□ -0.69
HTT-203ENST00000506137 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 HIP1RO75146 1068 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 ATP2B1P20020 1258 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 TCEAL1Q15170 157 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 NUTM2DQ5VT03 806 aaPredicted RBP10.77□□□□□ -0.69
HTT-203ENST00000506137 CC2D1AQ6P1N0 951 aaPredicted RBP10.77□□□□□ -0.69
HTT-203ENST00000506137 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 NUTM2AQ8IVF1 878 aaPredicted RBP10.77□□□□□ -0.69
HTT-203ENST00000506137 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 TSPYL1Q9H0U9 437 aa10.77□□□□□ -0.69
HTT-203ENST00000506137 G3BP2Q9UN86 482 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms