RNA–Protein interactions for RNA: ENST00000505753.1

SIM1-203, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 2

Gene SIM1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-203ENST00000505753 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
SIM1-203ENST00000505753 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
SIM1-203ENST00000505753 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
SIM1-203ENST00000505753 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
SIM1-203ENST00000505753 NFATC2IPQ8NCF5 419 aa12.55□□□□□ -0.4
SIM1-203ENST00000505753 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
SIM1-203ENST00000505753 SLC52A2Q9HAB3 445 aa12.55□□□□□ -0.4
SIM1-203ENST00000505753 ITGB4P16144 1822 aa12.55□□□□□ -0.4
SIM1-203ENST00000505753 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
SIM1-203ENST00000505753 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
SIM1-203ENST00000505753 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
SIM1-203ENST00000505753 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
SIM1-203ENST00000505753 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
SIM1-203ENST00000505753 SIK1P57059 783 aa12.53□□□□□ -0.4
SIM1-203ENST00000505753 CABP4P57796 275 aa12.53□□□□□ -0.4
SIM1-203ENST00000505753 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
SIM1-203ENST00000505753 CCNL1Q9UK58 526 aaPredicted RBP12.53□□□□□ -0.4
SIM1-203ENST00000505753 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
SIM1-203ENST00000505753 SCN11AQ9UI33 1791 aa12.52□□□□□ -0.41
SIM1-203ENST00000505753 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.41
SIM1-203ENST00000505753 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
SIM1-203ENST00000505753 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
SIM1-203ENST00000505753 KCNQ4P56696 695 aa12.51□□□□□ -0.41
SIM1-203ENST00000505753 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
SIM1-203ENST00000505753 ITPK1Q13572 414 aa12.5□□□□□ -0.41
SIM1-203ENST00000505753 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
SIM1-203ENST00000505753 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
SIM1-203ENST00000505753 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
SIM1-203ENST00000505753 ADAMTS8Q9UP79 889 aa12.49□□□□□ -0.41
SIM1-203ENST00000505753 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
SIM1-203ENST00000505753 CASZ1Q86V15 1759 aa12.48□□□□□ -0.41
SIM1-203ENST00000505753 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
SIM1-203ENST00000505753 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
SIM1-203ENST00000505753 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
SIM1-203ENST00000505753 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
SIM1-203ENST00000505753 ANP32CO43423 234 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 SLC16A10Q8TF71 515 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 QSER1Q2KHR3 1735 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 LRP5O75197 1615 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
SIM1-203ENST00000505753 CNTNAP4Q9C0A0 1308 aa12.46□□□□□ -0.41
SIM1-203ENST00000505753 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
SIM1-203ENST00000505753 TEFQ10587 303 aa12.46□□□□□ -0.41
SIM1-203ENST00000505753 ZNF790Q6PG37 636 aa12.46□□□□□ -0.41
SIM1-203ENST00000505753 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
SIM1-203ENST00000505753 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
SIM1-203ENST00000505753 C5P01031 1676 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 NEFMP07197 916 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
SIM1-203ENST00000505753 PTGER2P43116 358 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 WDR43Q15061 677 aaKnown RBP eCLIP12.45□□□□□ -0.42
SIM1-203ENST00000505753 MCM10Q7L590 875 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 TAF1LQ8IZX4 1826 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
SIM1-203ENST00000505753 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
SIM1-203ENST00000505753 PTCD1O75127 700 aaKnown RBP12.44□□□□□ -0.42
SIM1-203ENST00000505753 SSFA2P28290 1259 aa12.44□□□□□ -0.42
SIM1-203ENST00000505753 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
SIM1-203ENST00000505753 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
SIM1-203ENST00000505753 RTF1Q92541 710 aaKnown RBP12.44□□□□□ -0.42
SIM1-203ENST00000505753 MTFR1LQ9H019 292 aa12.44□□□□□ -0.42
SIM1-203ENST00000505753 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
SIM1-203ENST00000505753 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
SIM1-203ENST00000505753 DCTN1Q14203 1278 aa12.43□□□□□ -0.42
SIM1-203ENST00000505753 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
SIM1-203ENST00000505753 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
SIM1-203ENST00000505753 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
SIM1-203ENST00000505753 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
SIM1-203ENST00000505753 BTBD11A6QL63 1104 aa12.42□□□□□ -0.42
SIM1-203ENST00000505753 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
SIM1-203ENST00000505753 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
SIM1-203ENST00000505753 RIPK4P57078 832 aa12.42□□□□□ -0.42
SIM1-203ENST00000505753 INTS5Q6P9B9 1019 aaKnown RBP12.42□□□□□ -0.42
SIM1-203ENST00000505753 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
SIM1-203ENST00000505753 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
SIM1-203ENST00000505753 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
SIM1-203ENST00000505753 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
SIM1-203ENST00000505753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
SIM1-203ENST00000505753 KCNQ3O43525 872 aa12.41□□□□□ -0.42
SIM1-203ENST00000505753 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
SIM1-203ENST00000505753 AK7Q96M32 723 aa12.41□□□□□ -0.42
SIM1-203ENST00000505753 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
SIM1-203ENST00000505753 TJP1Q07157 1748 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
SIM1-203ENST00000505753 TUBGCP6Q96RT7 1819 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 ZBTB7AO95365 584 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
SIM1-203ENST00000505753 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 TTC5Q8N0Z6 440 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
SIM1-203ENST00000505753 GNPATO15228 680 aa12.39□□□□□ -0.43
SIM1-203ENST00000505753 DSG3P32926 999 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms