RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 FAM184AQ8NB25 1140 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 MX1P20591 662 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 PDE1AP54750 535 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 FBXO41Q8TF61 875 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 LRRC59Q96AG4 307 aaKnown RBP9.57□□□□□ -0.88
PROM1-206ENST00000505450 POLKQ9UBT6 870 aa9.57□□□□□ -0.88
PROM1-206ENST00000505450 PPIP5K1Q6PFW1 1433 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 GOLGA6L19H0YKK7 550 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 ZNF500O60304 480 aaPredicted RBP9.56□□□□□ -0.88
PROM1-206ENST00000505450 CWC27Q6UX04 472 aaKnown RBP9.56□□□□□ -0.88
PROM1-206ENST00000505450 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
PROM1-206ENST00000505450 UBTFL1P0CB47 393 aaPredicted RBP9.56□□□□□ -0.88
PROM1-206ENST00000505450 CCDC183Q5T5S1 534 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 CCDC83Q8IWF9 413 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 BECN2A8MW95 431 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
PROM1-206ENST00000505450 TPD52L1Q16890 204 aaPredicted RBP9.56□□□□□ -0.88
PROM1-206ENST00000505450 CEP85Q6P2H3 762 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
PROM1-206ENST00000505450 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
PROM1-206ENST00000505450 RAPGEF4Q8WZA2 1011 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 UHRF1BP1LA0JNW5 1464 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 SYNMO15061 1565 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 HSPA1LP34931 641 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 CEBPZQ03701 1054 aaKnown RBP9.55□□□□□ -0.88
PROM1-206ENST00000505450 C16orf45Q96MC5 204 aaPredicted RBP9.55□□□□□ -0.88
PROM1-206ENST00000505450 GNAI3P08754 354 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 CCDC192P0DO97 292 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 ZKSCAN1P17029 563 aaPredicted RBP9.55□□□□□ -0.88
PROM1-206ENST00000505450 KRT28Q7Z3Y7 464 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 CKAP2LQ8IYA6 745 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 NSD2O96028 1365 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 CCDC94Q9BW85 323 aaPredicted RBP9.55□□□□□ -0.88
PROM1-206ENST00000505450 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
PROM1-206ENST00000505450 CDC42BPAQ5VT25 1732 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 LETM1O95202 739 aaPredicted RBP9.54□□□□□ -0.88
PROM1-206ENST00000505450 AEBP1Q8IUX7 1158 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 E9PCH4 1651 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 ADCY10Q96PN6 1610 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 TERF1P54274 439 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 STK3Q13188 491 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
PROM1-206ENST00000505450 H3BQV1 296 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 CASTP20810 708 aaKnown RBP9.54□□□□□ -0.88
PROM1-206ENST00000505450 IFFO2Q5TF58 517 aa9.54□□□□□ -0.88
PROM1-206ENST00000505450 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
PROM1-206ENST00000505450 PRIMPOLQ96LW4 560 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 JAKMIP1Q96N16 626 aaKnown RBP9.53□□□□□ -0.88
PROM1-206ENST00000505450 KDM5AP29375 1690 aaKnown RBP9.53□□□□□ -0.88
PROM1-206ENST00000505450 AK9Q5TCS8 1911 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 MAST1Q9Y2H9 1570 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 CCT4P50991 539 aaKnown RBP9.53□□□□□ -0.88
PROM1-206ENST00000505450 TFIP11Q9UBB9 837 aaKnown RBP9.53□□□□□ -0.88
PROM1-206ENST00000505450 NRDCO43847 1150 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 CPA1P15085 419 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 PALD1Q9ULE6 856 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 ARHGEF5Q12774 1597 aa9.53□□□□□ -0.88
PROM1-206ENST00000505450 STX6O43752 255 aa9.52□□□□□ -0.88
PROM1-206ENST00000505450 DDIT3P35638 169 aa9.52□□□□□ -0.88
PROM1-206ENST00000505450 CCDC112Q8NEF3 446 aa9.52□□□□□ -0.88
PROM1-206ENST00000505450 RUFY2Q8WXA3 655 aa9.52□□□□□ -0.88
PROM1-206ENST00000505450 LRRFIP2Q9Y608 721 aaKnown RBP9.52□□□□□ -0.88
PROM1-206ENST00000505450 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 SMAP1Q8IYB5 467 aaPredicted RBP9.52□□□□□ -0.89
PROM1-206ENST00000505450 TNMDQ9H2S6 317 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 IFIT2P09913 472 aaKnown RBP9.52□□□□□ -0.89
PROM1-206ENST00000505450 FILIP1Q7Z7B0 1213 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 CNTROBQ8N137 903 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 MYRIPQ8NFW9 859 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 USP21Q9UK80 565 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 RXRBP28702 533 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 NUP62CLQ9H1M0 184 aa9.52□□□□□ -0.89
PROM1-206ENST00000505450 CGNQ9P2M7 1197 aaKnown RBP9.52□□□□□ -0.89
PROM1-206ENST00000505450 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
PROM1-206ENST00000505450 G2E3Q7L622 706 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 GPATCH3Q96I76 525 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
PROM1-206ENST00000505450 ZDHHC9Q9Y397 364 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 CLASP1Q7Z460 1538 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 SRGAP3O43295 1099 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 SRCIN1Q9C0H9 1055 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 C9orf78Q9NZ63 289 aaPredicted RBP9.51□□□□□ -0.89
PROM1-206ENST00000505450 HTATSF1O43719 755 aaKnown RBP9.51□□□□□ -0.89
PROM1-206ENST00000505450 BRD1O95696 1058 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 U2AF2P26368 475 aaKnown RBP eCLIP9.51□□□□□ -0.896e-6■■■■□ 22.5
PROM1-206ENST00000505450 LTKP29376 864 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 KRT85P78386 507 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
PROM1-206ENST00000505450 NECAB1Q8N987 351 aa9.51□□□□□ -0.89
PROM1-206ENST00000505450 ERICH4A6NGS2 130 aa9.5□□□□□ -0.89
PROM1-206ENST00000505450 TPM3P06753 285 aa9.5□□□□□ -0.89
PROM1-206ENST00000505450 UBE2HP62256 183 aa9.5□□□□□ -0.89
PROM1-206ENST00000505450 UVSSAQ2YD98 709 aa9.5□□□□□ -0.89
PROM1-206ENST00000505450 CCDC186Q7Z3E2 898 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms