RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TTC5Q8N0Z6 440 aa13□□□□□ -0.33
NR1I3-220ENST00000505005 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
NR1I3-220ENST00000505005 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
NR1I3-220ENST00000505005 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
NR1I3-220ENST00000505005 SIK1P57059 783 aa12.99□□□□□ -0.33
NR1I3-220ENST00000505005 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
NR1I3-220ENST00000505005 PROM2Q8N271 834 aa12.99□□□□□ -0.33
NR1I3-220ENST00000505005 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
NR1I3-220ENST00000505005 LY75O60449 1722 aa12.99□□□□□ -0.33
NR1I3-220ENST00000505005 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
NR1I3-220ENST00000505005 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
NR1I3-220ENST00000505005 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
NR1I3-220ENST00000505005 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
NR1I3-220ENST00000505005 CHMP4AQ9BY43 222 aa12.98□□□□□ -0.33
NR1I3-220ENST00000505005 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
NR1I3-220ENST00000505005 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
NR1I3-220ENST00000505005 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
NR1I3-220ENST00000505005 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
NR1I3-220ENST00000505005 NFE2L2Q16236 605 aa12.97□□□□□ -0.33
NR1I3-220ENST00000505005 RC3H1Q5TC82 1133 aaKnown RBP12.97□□□□□ -0.33
NR1I3-220ENST00000505005 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
NR1I3-220ENST00000505005 AK7Q96M32 723 aa12.97□□□□□ -0.33
NR1I3-220ENST00000505005 SPON1Q9HCB6 807 aa12.97□□□□□ -0.33
NR1I3-220ENST00000505005 PTF1AQ7RTS3 328 aa12.96□□□□□ -0.33
NR1I3-220ENST00000505005 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
NR1I3-220ENST00000505005 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
NR1I3-220ENST00000505005 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
NR1I3-220ENST00000505005 STARD3NLO95772 234 aa12.95□□□□□ -0.34
NR1I3-220ENST00000505005 SSFA2P28290 1259 aa12.95□□□□□ -0.34
NR1I3-220ENST00000505005 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
NR1I3-220ENST00000505005 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
NR1I3-220ENST00000505005 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
NR1I3-220ENST00000505005 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
NR1I3-220ENST00000505005 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-220ENST00000505005 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
NR1I3-220ENST00000505005 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
NR1I3-220ENST00000505005 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
NR1I3-220ENST00000505005 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
NR1I3-220ENST00000505005 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 MRC1P22897 1456 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 POLD1P28340 1107 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
NR1I3-220ENST00000505005 TOGARAM1Q9Y4F4 1720 aa12.93□□□□□ -0.34
NR1I3-220ENST00000505005 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
NR1I3-220ENST00000505005 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
NR1I3-220ENST00000505005 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
NR1I3-220ENST00000505005 RIPK4P57078 832 aa12.92□□□□□ -0.34
NR1I3-220ENST00000505005 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
NR1I3-220ENST00000505005 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
NR1I3-220ENST00000505005 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
NR1I3-220ENST00000505005 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
NR1I3-220ENST00000505005 PPP1R1BQ9UD71 204 aaPredicted RBP12.91□□□□□ -0.34
NR1I3-220ENST00000505005 ADAMTS8Q9UP79 889 aa12.91□□□□□ -0.34
NR1I3-220ENST00000505005 C5P01031 1676 aa12.9□□□□□ -0.34
NR1I3-220ENST00000505005 A0A087WZG4 1122 aa12.9□□□□□ -0.34
NR1I3-220ENST00000505005 PTCD1O75127 700 aaKnown RBP12.9□□□□□ -0.34
NR1I3-220ENST00000505005 RPS6KA4O75676 772 aa12.9□□□□□ -0.34
NR1I3-220ENST00000505005 PAPPAQ13219 1627 aa12.89□□□□□ -0.35
NR1I3-220ENST00000505005 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
NR1I3-220ENST00000505005 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
NR1I3-220ENST00000505005 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-220ENST00000505005 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
NR1I3-220ENST00000505005 LRP5O75197 1615 aa12.88□□□□□ -0.35
NR1I3-220ENST00000505005 ZBTB22O15209 634 aa12.88□□□□□ -0.35
NR1I3-220ENST00000505005 RFC4P35249 363 aa12.88□□□□□ -0.35
NR1I3-220ENST00000505005 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
NR1I3-220ENST00000505005 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
NR1I3-220ENST00000505005 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 GNPATO15228 680 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 MCM10Q7L590 875 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 CCDC87Q9NVE4 849 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
NR1I3-220ENST00000505005 RGL2O15211 777 aa12.86□□□□□ -0.35
NR1I3-220ENST00000505005 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
NR1I3-220ENST00000505005 CCDC27Q2M243 656 aa12.86□□□□□ -0.35
NR1I3-220ENST00000505005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
NR1I3-220ENST00000505005 ZPR1O75312 459 aa12.85□□□□□ -0.35
NR1I3-220ENST00000505005 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
NR1I3-220ENST00000505005 ITPK1Q13572 414 aa12.85□□□□□ -0.35
NR1I3-220ENST00000505005 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
NR1I3-220ENST00000505005 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
NR1I3-220ENST00000505005 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-220ENST00000505005 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
NR1I3-220ENST00000505005 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-220ENST00000505005 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-220ENST00000505005 GNAI1P63096 354 aa12.84□□□□□ -0.35
NR1I3-220ENST00000505005 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
NR1I3-220ENST00000505005 TSPYL4Q9UJ04 414 aa12.84□□□□□ -0.35
NR1I3-220ENST00000505005 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
NR1I3-220ENST00000505005 HOXB7P09629 217 aa12.83□□□□□ -0.36
NR1I3-220ENST00000505005 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-220ENST00000505005 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms