RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 LARP1Q6PKG0 1096 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 SLC5A1P13866 664 aa8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 RPGRQ92834 1020 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 TRIM21P19474 475 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 AMOTQ4VCS5 1084 aa8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 NUP62CLQ9H1M0 184 aa8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 SMTNL1A8MU46 457 aa8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 MKNK2Q9HBH9 465 aa8.42□□□□□ -1.06
SYNPO2-205ENST00000504178 MINDY4BA8MYZ0 360 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 ADAMTS2O95450 1211 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 KIF1BPQ96EK5 621 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 DDX11Q96FC9 970 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 WDR97A6NE52 1622 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 ENOX2Q16206 610 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 MX1P20591 662 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 CCDC61Q9Y6R9 512 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 KIAA0586Q9BVV6 1533 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 LEKR1Q6ZMV7 388 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 SCLT1Q96NL6 688 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 SLFN5Q08AF3 891 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 PPP4R3AQ6IN85 833 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 EXOC6BQ9Y2D4 811 aa8.41□□□□□ -1.06
SYNPO2-205ENST00000504178 JAKMIP3Q5VZ66 844 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 IQCEQ6IPM2 695 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 HSP90AB3PQ58FF7 597 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 THUMPD2Q9BTF0 503 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 U3KPZ7 1027 aaPredicted RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 LRPPRCP42704 1394 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 PRXQ9BXM0 1461 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 SSR1P43307 286 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 CCDC96Q2M329 555 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 NME9Q86XW9 330 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 EIF5P55010 431 aaKnown RBP8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 CUL5Q93034 780 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 DNAI2Q9GZS0 605 aa8.4□□□□□ -1.06
SYNPO2-205ENST00000504178 POTEJP0CG39 1038 aa8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 GBP2P32456 591 aaPredicted RBP8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 IFIT5Q13325 482 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 MTERF4Q7Z6M4 381 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 TSG101Q99816 390 aa8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 TSPYL1Q9H0U9 437 aa8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 TRMT112Q9UI30 125 aaKnown RBP8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 CHMP4BP1P59074 171 aa8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 ZNF397Q8NF99 534 aaPredicted RBP8.4□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC83Q8IWF9 413 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 NAPBQ9H115 298 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 BOLA2Q9H3K6 86 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 ZNF219Q9P2Y4 722 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 GLRX3O76003 335 aaKnown RBP8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 FAM193AP78312 1265 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 ALDH1L2Q3SY69 923 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 TAF4BQ92750 862 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
SYNPO2-205ENST00000504178 ERLIN1O75477 346 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 CAMK4Q16566 473 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 SSRP1Q08945 709 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 NAIPQ13075 1403 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 CENPHQ9H3R5 247 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 HYPKQ9NX55 129 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 AMOTL2Q9Y2J4 779 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 EPB41L2O43491 1005 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 RANBP6O60518 1105 aaKnown RBP8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 MPNDQ8N594 471 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 GRPEL1Q9HAV7 217 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 TAX1BP1Q86VP1 789 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC112Q8NEF3 446 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 ABCC11Q96J66 1382 aa8.38□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC8Q9H0W5 538 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 SLC12A7Q9Y666 1083 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 NKTRP30414 1462 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 WDHD1O75717 1129 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 HMGN5P82970 282 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 PHAXQ9H814 394 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 CALRP27797 417 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 MAP3K11Q16584 847 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 DNAAF4Q8WXU2 420 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 UBA5Q9GZZ9 404 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 PDIA4P13667 645 aaKnown RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 CCDC148Q8NFR7 591 aa8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 CTCFLQ8NI51 663 aaPredicted RBP8.37□□□□□ -1.07
SYNPO2-205ENST00000504178 EMILIN1Q9Y6C2 1016 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms