RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 INTS4Q96HW7 963 aaKnown RBP21.52■■□□□ 1.04
POLR2J3-209ENST00000504157 KIF20BQ96Q89 1820 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 PLCD3Q8N3E9 789 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 TIGD1Q96MW7 591 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 MBIPQ9NS73 344 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 ABCC3O15438 1527 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 KDM4AO75164 1064 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 TERF2Q15554 542 aa21.51■■□□□ 1.03
POLR2J3-209ENST00000504157 TMX3Q96JJ7 454 aa21.5■■□□□ 1.03
POLR2J3-209ENST00000504157 C16orf71Q8IYS4 520 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 KCNF1Q9H3M0 494 aa21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 PYCARDQ9ULZ3 195 aa21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 AGLP35573 1532 aa21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 IL17RAQ96F46 866 aa21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 OSBPL3Q9H4L5 887 aa21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
POLR2J3-209ENST00000504157 SRPK2P78362 688 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-209ENST00000504157 PTPRMP28827 1452 aa21.47■■□□□ 1.03
POLR2J3-209ENST00000504157 TULP2O00295 520 aa21.47■■□□□ 1.03
POLR2J3-209ENST00000504157 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
POLR2J3-209ENST00000504157 CCDC183Q5T5S1 534 aa21.47■■□□□ 1.03
POLR2J3-209ENST00000504157 CEP85Q6P2H3 762 aa21.47■■□□□ 1.03
POLR2J3-209ENST00000504157 OTUD7AQ8TE49 926 aaPredicted RBP21.47■■□□□ 1.03
POLR2J3-209ENST00000504157 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
POLR2J3-209ENST00000504157 GADD45BO75293 160 aaPredicted RBP21.45■■□□□ 1.03
POLR2J3-209ENST00000504157 ANAPC15P60006 121 aa21.45■■□□□ 1.03
POLR2J3-209ENST00000504157 FAM193AP78312 1265 aa21.45■■□□□ 1.03
POLR2J3-209ENST00000504157 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.03
POLR2J3-209ENST00000504157 TMEM87AQ8NBN3 555 aa21.45■■□□□ 1.03
POLR2J3-209ENST00000504157 PHACTR3Q96KR7 559 aa21.45■■□□□ 1.03
POLR2J3-209ENST00000504157 RGS12O14924 1447 aa21.45■■□□□ 1.02
POLR2J3-209ENST00000504157 HCLS1P14317 486 aaPredicted RBP21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 C8orf58Q8NAV2 365 aa21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 KIF18AQ8NI77 898 aa21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 CALCOCO1Q9P1Z2 691 aa21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 SMTNL1A8MU46 457 aa21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 NEK4P51957 841 aa21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
POLR2J3-209ENST00000504157 POLKQ9UBT6 870 aa21.43■■□□□ 1.02
POLR2J3-209ENST00000504157 RIMS2Q9UQ26 1411 aa21.43■■□□□ 1.02
POLR2J3-209ENST00000504157 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
POLR2J3-209ENST00000504157 USP48Q86UV5 1035 aa21.43■■□□□ 1.02
POLR2J3-209ENST00000504157 MX1P20591 662 aa21.42■■□□□ 1.02
POLR2J3-209ENST00000504157 KRT222Q8N1A0 295 aa21.42■■□□□ 1.02
POLR2J3-209ENST00000504157 SSH2Q76I76 1423 aa21.42■■□□□ 1.02
POLR2J3-209ENST00000504157 GOLGA6L6A8MZA4 724 aa21.41■■□□□ 1.02
POLR2J3-209ENST00000504157 CREBRFQ8IUR6 639 aa21.41■■□□□ 1.02
POLR2J3-209ENST00000504157 YTHDC2Q9H6S0 1430 aaKnown RBP21.41■■□□□ 1.02
POLR2J3-209ENST00000504157 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
POLR2J3-209ENST00000504157 MCCP23508 829 aa21.4■■□□□ 1.02
POLR2J3-209ENST00000504157 FAM53CQ9NYF3 392 aa21.4■■□□□ 1.02
POLR2J3-209ENST00000504157 CDK12Q9NYV4 1490 aaPredicted RBP21.4■■□□□ 1.02
POLR2J3-209ENST00000504157 CAPN2P17655 700 aa21.4■■□□□ 1.02
POLR2J3-209ENST00000504157 TSPYL1Q9H0U9 437 aa21.4■■□□□ 1.02
POLR2J3-209ENST00000504157 WDR33Q9C0J8 1336 aaKnown RBP21.39■■□□□ 1.02
POLR2J3-209ENST00000504157 SMARCA5O60264 1052 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-209ENST00000504157 AP5Z1O43299 807 aa21.38■■□□□ 1.01
POLR2J3-209ENST00000504157 EPB41L2O43491 1005 aaKnown RBP21.38■■□□□ 1.01
POLR2J3-209ENST00000504157 FUCA2Q9BTY2 467 aa21.38■■□□□ 1.01
POLR2J3-209ENST00000504157 GDPD2Q9HCC8 539 aa21.38■■□□□ 1.01
POLR2J3-209ENST00000504157 PTPRCP08575 1304 aa21.38■■□□□ 1.01
POLR2J3-209ENST00000504157 IL13P35225 146 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 PDE1AP54750 535 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 ATP7BP35670 1465 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 HMMRO75330 724 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 ESYT1Q9BSJ8 1104 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 PAXBP1Q9Y5B6 917 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 MSH6P52701 1360 aa21.37■■□□□ 1.01
POLR2J3-209ENST00000504157 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
POLR2J3-209ENST00000504157 RPAP1Q9BWH6 1393 aaPredicted RBP21.36■■□□□ 1.01
POLR2J3-209ENST00000504157 TUBGCP6Q96RT7 1819 aa21.36■■□□□ 1.01
POLR2J3-209ENST00000504157 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
POLR2J3-209ENST00000504157 HMOX1P09601 288 aa21.35■■□□□ 1.01
POLR2J3-209ENST00000504157 DLG5Q8TDM6 1919 aa21.35■■□□□ 1.01
POLR2J3-209ENST00000504157 SALL3Q9BXA9 1300 aa21.35■■□□□ 1.01
POLR2J3-209ENST00000504157 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1.01
POLR2J3-209ENST00000504157 ZNF397Q8NF99 534 aaPredicted RBP21.33■■□□□ 1.01
POLR2J3-209ENST00000504157 UBE2HP62256 183 aa21.33■■□□□ 1
POLR2J3-209ENST00000504157 PLCB2Q00722 1185 aa21.33■■□□□ 1
POLR2J3-209ENST00000504157 CCDC112Q8NEF3 446 aa21.33■■□□□ 1
POLR2J3-209ENST00000504157 PAXIP1Q6ZW49 1069 aaPredicted RBP21.32■■□□□ 1
POLR2J3-209ENST00000504157 SPC24Q8NBT2 197 aa21.32■■□□□ 1
POLR2J3-209ENST00000504157 CFAP65Q6ZU64 1925 aaKnown RBP21.32■■□□□ 1
POLR2J3-209ENST00000504157 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
POLR2J3-209ENST00000504157 NAA30Q147X3 362 aaPredicted RBP21.32■■□□□ 1
POLR2J3-209ENST00000504157 PRAM1Q96QH2 718 aa21.31■■□□□ 1
POLR2J3-209ENST00000504157 PALD1Q9ULE6 856 aa21.31■■□□□ 1
POLR2J3-209ENST00000504157 TNNT1P13805 278 aa21.31■■□□□ 1
POLR2J3-209ENST00000504157 IRX3P78415 501 aaPredicted RBP21.31■■□□□ 1
POLR2J3-209ENST00000504157 MEIS3Q99687 375 aa21.31■■□□□ 1
POLR2J3-209ENST00000504157 MAP2P11137 1827 aaKnown RBP21.3■■□□□ 1
POLR2J3-209ENST00000504157 KMT5BQ4FZB7 885 aa21.3■■□□□ 1
POLR2J3-209ENST00000504157 CABP1Q9NZU7 370 aa21.3■■□□□ 1
POLR2J3-209ENST00000504157 PTGS1P23219 599 aa21.29■■□□□ 1
POLR2J3-209ENST00000504157 C16orf45Q96MC5 204 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms