RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 GNAT3A8MTJ3 354 aa27.49■■□□□ 1.99
PDGFRA-203ENST00000503856 PDGFDQ9GZP0 370 aaPredicted RBP27.49■■□□□ 1.99
PDGFRA-203ENST00000503856 DLG5Q8TDM6 1919 aa27.48■■□□□ 1.99
PDGFRA-203ENST00000503856 LOC102724428A0A0B4J2F2 783 aa27.48■■□□□ 1.99
PDGFRA-203ENST00000503856 SIK1P57059 783 aa27.48■■□□□ 1.99
PDGFRA-203ENST00000503856 SLC52A2Q9HAB3 445 aa27.48■■□□□ 1.99
PDGFRA-203ENST00000503856 QSER1Q2KHR3 1735 aa27.47■■□□□ 1.99
PDGFRA-203ENST00000503856 MRC1P22897 1456 aa27.46■■□□□ 1.99
PDGFRA-203ENST00000503856 IL17REQ8NFR9 667 aa27.46■■□□□ 1.99
PDGFRA-203ENST00000503856 LRP5O75197 1615 aa27.45■■□□□ 1.98
PDGFRA-203ENST00000503856 PLEKHF1Q96S99 279 aa27.44■■□□□ 1.98
PDGFRA-203ENST00000503856 RBM42Q9BTD8 480 aaKnown RBP27.44■■□□□ 1.98
PDGFRA-203ENST00000503856 SIPA1L3O60292 1781 aaPredicted RBP27.43■■□□□ 1.98
PDGFRA-203ENST00000503856 ATP6V1AP38606 617 aa27.43■■□□□ 1.98
PDGFRA-203ENST00000503856 TFCP2L1Q9NZI6 479 aa27.43■■□□□ 1.98
PDGFRA-203ENST00000503856 C4BP0C0L5 1744 aa27.43■■□□□ 1.98
PDGFRA-203ENST00000503856 ZNF831Q5JPB2 1677 aa27.43■■□□□ 1.98
PDGFRA-203ENST00000503856 NEFMP07197 916 aa27.42■■□□□ 1.98
PDGFRA-203ENST00000503856 SLC4A9Q96Q91 983 aa27.42■■□□□ 1.98
PDGFRA-203ENST00000503856 HMGB2P26583 209 aaKnown RBP27.41■■□□□ 1.98
PDGFRA-203ENST00000503856 ITPK1Q13572 414 aa27.41■■□□□ 1.98
PDGFRA-203ENST00000503856 PNNQ9H307 717 aaKnown RBP27.41■■□□□ 1.98
PDGFRA-203ENST00000503856 PTCD1O75127 700 aaKnown RBP27.4■■□□□ 1.98
PDGFRA-203ENST00000503856 SRCAPQ6ZRS2 3230 aa27.39■■□□□ 1.98
PDGFRA-203ENST00000503856 UBR3Q6ZT12 1888 aa27.39■■□□□ 1.98
PDGFRA-203ENST00000503856 TEFQ10587 303 aa27.39■■□□□ 1.98
PDGFRA-203ENST00000503856 SLC39A6Q13433 755 aa27.39■■□□□ 1.98
PDGFRA-203ENST00000503856 LINC00116Q8NCU8 138 aa27.39■■□□□ 1.98
PDGFRA-203ENST00000503856 PNPLA7Q6ZV29 1317 aa27.39■■□□□ 1.97
PDGFRA-203ENST00000503856 CEMIPQ8WUJ3 1361 aa27.38■■□□□ 1.97
PDGFRA-203ENST00000503856 ZBTB7AO95365 584 aa27.38■■□□□ 1.97
PDGFRA-203ENST00000503856 COL5A3P25940 1745 aaPredicted RBP27.37■■□□□ 1.97
PDGFRA-203ENST00000503856 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
PDGFRA-203ENST00000503856 RTF1Q92541 710 aaKnown RBP27.37■■□□□ 1.97
PDGFRA-203ENST00000503856 MCM10Q7L590 875 aa27.36■■□□□ 1.97
PDGFRA-203ENST00000503856 SPON1Q9HCB6 807 aa27.36■■□□□ 1.97
PDGFRA-203ENST00000503856 MYH14Q7Z406 1995 aaKnown RBP27.36■■□□□ 1.97
PDGFRA-203ENST00000503856 MAPK8IP3Q9UPT6 1336 aa27.36■■□□□ 1.97
PDGFRA-203ENST00000503856 ANP32CO43423 234 aa27.35■■□□□ 1.97
PDGFRA-203ENST00000503856 UBR2Q8IWV8 1755 aa27.35■■□□□ 1.97
PDGFRA-203ENST00000503856 TJP1Q07157 1748 aa27.34■■□□□ 1.97
PDGFRA-203ENST00000503856 HTATSF1O43719 755 aaKnown RBP27.34■■□□□ 1.97
PDGFRA-203ENST00000503856 DCTN1Q14203 1278 aa27.34■■□□□ 1.97
PDGFRA-203ENST00000503856 NFE2L2Q16236 605 aa27.34■■□□□ 1.97
PDGFRA-203ENST00000503856 AK7Q96M32 723 aa27.34■■□□□ 1.97
PDGFRA-203ENST00000503856 ATF5Q9Y2D1 282 aaPredicted RBP27.34■■□□□ 1.97
PDGFRA-203ENST00000503856 CCDC184Q52MB2 194 aa27.33■■□□□ 1.97
PDGFRA-203ENST00000503856 ADAMTS8Q9UP79 889 aa27.33■■□□□ 1.97
PDGFRA-203ENST00000503856 COL23A1Q86Y22 540 aaPredicted RBP27.32■■□□□ 1.96
PDGFRA-203ENST00000503856 KCPQ6ZWJ8 1503 aa27.31■■□□□ 1.96
PDGFRA-203ENST00000503856 CICQ96RK0 1608 aaPredicted RBP27.31■■□□□ 1.96
PDGFRA-203ENST00000503856 AMIGO3Q86WK7 504 aa27.31■■□□□ 1.96
PDGFRA-203ENST00000503856 CCDC146Q8IYE0 955 aa27.31■■□□□ 1.96
PDGFRA-203ENST00000503856 MTFR1LQ9H019 292 aa27.31■■□□□ 1.96
PDGFRA-203ENST00000503856 SMIM5Q71RC9 77 aa27.3■■□□□ 1.96
PDGFRA-203ENST00000503856 MSH5O43196 834 aa27.29■■□□□ 1.96
PDGFRA-203ENST00000503856 TTC5Q8N0Z6 440 aa27.29■■□□□ 1.96
PDGFRA-203ENST00000503856 SLC16A10Q8TF71 515 aa27.29■■□□□ 1.96
PDGFRA-203ENST00000503856 GNPATO15228 680 aa27.28■■□□□ 1.96
PDGFRA-203ENST00000503856 ZNF790Q6PG37 636 aa27.28■■□□□ 1.96
PDGFRA-203ENST00000503856 FLAD1Q8NFF5 587 aa27.28■■□□□ 1.96
PDGFRA-203ENST00000503856 BTBD11A6QL63 1104 aa27.27■■□□□ 1.96
PDGFRA-203ENST00000503856 PHF14O94880 888 aa27.27■■□□□ 1.96
PDGFRA-203ENST00000503856 RC3H1Q5TC82 1133 aaKnown RBP27.27■■□□□ 1.96
PDGFRA-203ENST00000503856 RUNDC1Q96C34 613 aa27.27■■□□□ 1.96
PDGFRA-203ENST00000503856 PTGER2P43116 358 aa27.26■■□□□ 1.95
PDGFRA-203ENST00000503856 DNAJC10Q8IXB1 793 aa27.26■■□□□ 1.95
PDGFRA-203ENST00000503856 COL24A1Q17RW2 1714 aa27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 CNTNAP4Q9C0A0 1308 aa27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 KCNQ3O43525 872 aa27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 RIPK4P57078 832 aa27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 ZNF496Q96IT1 587 aaPredicted RBP27.25■■□□□ 1.95
PDGFRA-203ENST00000503856 SSFA2P28290 1259 aa27.24■■□□□ 1.95
PDGFRA-203ENST00000503856 THUMPD2Q9BTF0 503 aaKnown RBP27.24■■□□□ 1.95
PDGFRA-203ENST00000503856 CRKLP46109 303 aaKnown RBP27.23■■□□□ 1.95
PDGFRA-203ENST00000503856 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
PDGFRA-203ENST00000503856 VSIG10Q8N0Z9 540 aa27.23■■□□□ 1.95
PDGFRA-203ENST00000503856 SGIP1Q9BQI5 828 aa27.23■■□□□ 1.95
PDGFRA-203ENST00000503856 PPP1R1BQ9UD71 204 aaPredicted RBP27.23■■□□□ 1.95
PDGFRA-203ENST00000503856 RRP7AQ9Y3A4 280 aaKnown RBP27.23■■□□□ 1.95
PDGFRA-203ENST00000503856 RTCBQ9Y3I0 505 aaKnown RBP27.22■■□□□ 1.95
PDGFRA-203ENST00000503856 NEUROD2Q15784 382 aa27.21■■□□□ 1.95
PDGFRA-203ENST00000503856 MRS2Q9HD23 443 aa27.21■■□□□ 1.95
PDGFRA-203ENST00000503856 HEG1Q9ULI3 1381 aa27.21■■□□□ 1.95
PDGFRA-203ENST00000503856 RPS6KA4O75676 772 aa27.2■■□□□ 1.94
PDGFRA-203ENST00000503856 CYP19A1P11511 503 aaPredicted RBP27.2■■□□□ 1.94
PDGFRA-203ENST00000503856 FMNL2Q96PY5 1086 aa27.2■■□□□ 1.94
PDGFRA-203ENST00000503856 MIS18AQ9NYP9 233 aa27.2■■□□□ 1.94
PDGFRA-203ENST00000503856 INTS5Q6P9B9 1019 aaKnown RBP27.19■■□□□ 1.94
PDGFRA-203ENST00000503856 KDM3BQ7LBC6 1761 aa27.19■■□□□ 1.94
PDGFRA-203ENST00000503856 TRAPPC3LQ5T215 181 aa27.18■■□□□ 1.94
PDGFRA-203ENST00000503856 MSL1Q68DK7 614 aa27.18■■□□□ 1.94
PDGFRA-203ENST00000503856 C4AP0C0L4 1744 aa27.17■■□□□ 1.94
PDGFRA-203ENST00000503856 PNISRQ8TF01 805 aaKnown RBP27.17■■□□□ 1.94
PDGFRA-203ENST00000503856 CCDC87Q9NVE4 849 aa27.17■■□□□ 1.94
PDGFRA-203ENST00000503856 LMOD3Q0VAK6 560 aa27.16■■□□□ 1.94
PDGFRA-203ENST00000503856 ARHGEF1Q92888 912 aaKnown RBP27.16■■□□□ 1.94
PDGFRA-203ENST00000503856 ADRA2BP18089 450 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms