RNA–Protein interactions for RNA: ENST00000502974.1

CXCL3-202, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 2

Gene CXCL3, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-202ENST00000502974 RSPH6AQ9H0K4 717 aa33.38■■■□□ 2.93
CXCL3-202ENST00000502974 VIRMAQ69YN4 1812 aaKnown RBP33.37■■■□□ 2.93
CXCL3-202ENST00000502974 PRKAR2BP31323 418 aa33.37■■■□□ 2.93
CXCL3-202ENST00000502974 ATG3Q9NT62 314 aa33.37■■■□□ 2.93
CXCL3-202ENST00000502974 MYBBP1AQ9BQG0 1328 aaKnown RBP33.36■■■□□ 2.93
CXCL3-202ENST00000502974 C4BP0C0L5 1744 aa33.36■■■□□ 2.93
CXCL3-202ENST00000502974 PTGER2P43116 358 aa33.35■■■□□ 2.93
CXCL3-202ENST00000502974 SLC16A10Q8TF71 515 aa33.34■■■□□ 2.93
CXCL3-202ENST00000502974 AK7Q96M32 723 aa33.33■■■□□ 2.93
CXCL3-202ENST00000502974 MSH5O43196 834 aa33.32■■■□□ 2.92
CXCL3-202ENST00000502974 GAS2L2Q8NHY3 880 aa33.32■■■□□ 2.92
CXCL3-202ENST00000502974 FCHSD2O94868 740 aa33.31■■■□□ 2.92
CXCL3-202ENST00000502974 ATP6V1AP38606 617 aa33.31■■■□□ 2.92
CXCL3-202ENST00000502974 PHACTR3Q96KR7 559 aa33.31■■■□□ 2.92
CXCL3-202ENST00000502974 NFATC2IPQ8NCF5 419 aa33.3■■■□□ 2.92
CXCL3-202ENST00000502974 PRKRIP1Q9H875 184 aaPredicted RBP33.3■■■□□ 2.92
CXCL3-202ENST00000502974 LGR6Q9HBX8 967 aa33.3■■■□□ 2.92
CXCL3-202ENST00000502974 RBM42Q9BTD8 480 aaKnown RBP33.29■■■□□ 2.92
CXCL3-202ENST00000502974 RNMTO43148 476 aaKnown RBP33.28■■■□□ 2.92
CXCL3-202ENST00000502974 MAP3K5Q99683 1374 aa33.28■■■□□ 2.92
CXCL3-202ENST00000502974 ADAMTS7Q9UKP4 1686 aa33.27■■■□□ 2.92
CXCL3-202ENST00000502974 COL23A1Q86Y22 540 aaPredicted RBP33.27■■■□□ 2.92
CXCL3-202ENST00000502974 LINC00116Q8NCU8 138 aa33.27■■■□□ 2.92
CXCL3-202ENST00000502974 FLAD1Q8NFF5 587 aa33.27■■■□□ 2.92
CXCL3-202ENST00000502974 SGIP1Q9BQI5 828 aa33.27■■■□□ 2.92
CXCL3-202ENST00000502974 ITPK1Q13572 414 aa33.26■■■□□ 2.91
CXCL3-202ENST00000502974 UBR3Q6ZT12 1888 aa33.25■■■□□ 2.91
CXCL3-202ENST00000502974 ZNF831Q5JPB2 1677 aa33.25■■■□□ 2.91
CXCL3-202ENST00000502974 MRC1P22897 1456 aa33.25■■■□□ 2.91
CXCL3-202ENST00000502974 GNAT3A8MTJ3 354 aa33.24■■■□□ 2.91
CXCL3-202ENST00000502974 POLD1P28340 1107 aa33.24■■■□□ 2.91
CXCL3-202ENST00000502974 SLC52A2Q9HAB3 445 aa33.24■■■□□ 2.91
CXCL3-202ENST00000502974 ARXQ96QS3 562 aa33.23■■■□□ 2.91
CXCL3-202ENST00000502974 COL24A1Q17RW2 1714 aa33.22■■■□□ 2.91
CXCL3-202ENST00000502974 PHF14O94880 888 aa33.21■■■□□ 2.91
CXCL3-202ENST00000502974 PTCD1O75127 700 aaKnown RBP33.2■■■□□ 2.91
CXCL3-202ENST00000502974 GNPATO15228 680 aa33.19■■■□□ 2.9
CXCL3-202ENST00000502974 NEFMP07197 916 aa33.19■■■□□ 2.9
CXCL3-202ENST00000502974 SLC4A9Q96Q91 983 aa33.19■■■□□ 2.9
CXCL3-202ENST00000502974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.18■■■□□ 2.9
CXCL3-202ENST00000502974 SSFA2P28290 1259 aa33.18■■■□□ 2.9
CXCL3-202ENST00000502974 FHDC1Q9C0D6 1143 aaPredicted RBP33.18■■■□□ 2.9
CXCL3-202ENST00000502974 COL5A3P25940 1745 aaPredicted RBP33.18■■■□□ 2.9
CXCL3-202ENST00000502974 IL17REQ8NFR9 667 aa33.17■■■□□ 2.9
CXCL3-202ENST00000502974 AMIGO3Q86WK7 504 aa33.16■■■□□ 2.9
CXCL3-202ENST00000502974 MSL1Q68DK7 614 aa33.15■■■□□ 2.9
CXCL3-202ENST00000502974 PNNQ9H307 717 aaKnown RBP33.15■■■□□ 2.9
CXCL3-202ENST00000502974 TEFQ10587 303 aa33.14■■■□□ 2.9
CXCL3-202ENST00000502974 PLEKHF1Q96S99 279 aa33.14■■■□□ 2.9
CXCL3-202ENST00000502974 DCAF8L1A6NGE4 600 aa33.13■■■□□ 2.89
CXCL3-202ENST00000502974 SMIM5Q71RC9 77 aa33.13■■■□□ 2.89
CXCL3-202ENST00000502974 SIPA1L3O60292 1781 aaPredicted RBP33.12■■■□□ 2.89
CXCL3-202ENST00000502974 CNTNAP4Q9C0A0 1308 aa33.12■■■□□ 2.89
CXCL3-202ENST00000502974 MAPK8IP3Q9UPT6 1336 aa33.12■■■□□ 2.89
CXCL3-202ENST00000502974 SLC39A6Q13433 755 aa33.12■■■□□ 2.89
CXCL3-202ENST00000502974 RTF1Q92541 710 aaKnown RBP33.12■■■□□ 2.89
CXCL3-202ENST00000502974 SYT17Q9BSW7 474 aa33.12■■■□□ 2.89
CXCL3-202ENST00000502974 DLG5Q8TDM6 1919 aa33.12■■■□□ 2.89
CXCL3-202ENST00000502974 RTCBQ9Y3I0 505 aaKnown RBP33.11■■■□□ 2.89
CXCL3-202ENST00000502974 TJP1Q07157 1748 aa33.11■■■□□ 2.89
CXCL3-202ENST00000502974 CEMIPQ8WUJ3 1361 aa33.1■■■□□ 2.89
CXCL3-202ENST00000502974 CICQ96RK0 1608 aaPredicted RBP33.1■■■□□ 2.89
CXCL3-202ENST00000502974 WDR43Q15061 677 aaKnown RBP eCLIP33.1■■■□□ 2.89
CXCL3-202ENST00000502974 RC3H1Q5TC82 1133 aaKnown RBP33.1■■■□□ 2.89
CXCL3-202ENST00000502974 KLHL34Q8N239 644 aa33.1■■■□□ 2.89
CXCL3-202ENST00000502974 MCM10Q7L590 875 aa33.08■■■□□ 2.89
CXCL3-202ENST00000502974 MYH14Q7Z406 1995 aaKnown RBP33.07■■■□□ 2.88
CXCL3-202ENST00000502974 NFE2L2Q16236 605 aa33.06■■■□□ 2.88
CXCL3-202ENST00000502974 TTC5Q8N0Z6 440 aa33.06■■■□□ 2.88
CXCL3-202ENST00000502974 KCPQ6ZWJ8 1503 aa33.06■■■□□ 2.88
CXCL3-202ENST00000502974 ANP32CO43423 234 aa33.05■■■□□ 2.88
CXCL3-202ENST00000502974 HTATSF1O43719 755 aaKnown RBP33.05■■■□□ 2.88
CXCL3-202ENST00000502974 DCTN1Q14203 1278 aa33.05■■■□□ 2.88
CXCL3-202ENST00000502974 TRAPPC3LQ5T215 181 aa33.05■■■□□ 2.88
CXCL3-202ENST00000502974 UBR2Q8IWV8 1755 aa33.05■■■□□ 2.88
CXCL3-202ENST00000502974 CRKLP46109 303 aaKnown RBP33.04■■■□□ 2.88
CXCL3-202ENST00000502974 RPS6KA4O75676 772 aa33.03■■■□□ 2.88
CXCL3-202ENST00000502974 ADRA2BP18089 450 aa33.03■■■□□ 2.88
CXCL3-202ENST00000502974 DNAJC10Q8IXB1 793 aa33.02■■■□□ 2.88
CXCL3-202ENST00000502974 CCDC146Q8IYE0 955 aa33.01■■■□□ 2.87
CXCL3-202ENST00000502974 ADAMTS8Q9UP79 889 aa33.01■■■□□ 2.87
CXCL3-202ENST00000502974 BTBD11A6QL63 1104 aa32.99■■■□□ 2.87
CXCL3-202ENST00000502974 RFC4P35249 363 aa32.99■■■□□ 2.87
CXCL3-202ENST00000502974 ZNF790Q6PG37 636 aa32.99■■■□□ 2.87
CXCL3-202ENST00000502974 VSIG10Q8N0Z9 540 aa32.99■■■□□ 2.87
CXCL3-202ENST00000502974 C4AP0C0L4 1744 aa32.98■■■□□ 2.87
CXCL3-202ENST00000502974 ARHGEF1Q92888 912 aaKnown RBP32.98■■■□□ 2.87
CXCL3-202ENST00000502974 CCDC87Q9NVE4 849 aa32.96■■■□□ 2.87
CXCL3-202ENST00000502974 CCDC184Q52MB2 194 aa32.95■■■□□ 2.87
CXCL3-202ENST00000502974 INTS5Q6P9B9 1019 aaKnown RBP32.95■■■□□ 2.87
CXCL3-202ENST00000502974 RUNDC1Q96C34 613 aa32.95■■■□□ 2.87
CXCL3-202ENST00000502974 CYP19A1P11511 503 aaPredicted RBP32.94■■■□□ 2.86
CXCL3-202ENST00000502974 ZNF496Q96IT1 587 aaPredicted RBP32.94■■■□□ 2.86
CXCL3-202ENST00000502974 KCNQ3O43525 872 aa32.93■■■□□ 2.86
CXCL3-202ENST00000502974 TMPOP42166 694 aaKnown RBP32.93■■■□□ 2.86
CXCL3-202ENST00000502974 RIPK4P57078 832 aa32.93■■■□□ 2.86
CXCL3-202ENST00000502974 NLGN1Q8N2Q7 840 aa32.92■■■□□ 2.86
CXCL3-202ENST00000502974 THUMPD2Q9BTF0 503 aaKnown RBP32.92■■■□□ 2.86
CXCL3-202ENST00000502974 TAF7Q15545 349 aaPredicted RBP32.91■■■□□ 2.86
CXCL3-202ENST00000502974 NLGN2Q8NFZ4 835 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms