RNA–Protein interactions for RNA: ENST00000502821.5

SPOCK3-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,749 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-206ENST00000502821 ZC3H6P61129 1189 aaKnown RBP27.39■■□□□ 1.98
SPOCK3-206ENST00000502821 DDX17Q92841 729 aaKnown RBP27.39■■□□□ 1.98
SPOCK3-206ENST00000502821 C1orf115Q9H7X2 142 aa27.39■■□□□ 1.98
SPOCK3-206ENST00000502821 RNMTO43148 476 aaKnown RBP27.38■■□□□ 1.97
SPOCK3-206ENST00000502821 EIF4A1P60842 406 aaKnown RBP27.38■■□□□ 1.97
SPOCK3-206ENST00000502821 C1orf141Q5JVX7 400 aa27.38■■□□□ 1.97
SPOCK3-206ENST00000502821 BRINP3Q76B58 766 aa27.38■■□□□ 1.97
SPOCK3-206ENST00000502821 ANKRD44Q8N8A2 993 aa27.38■■□□□ 1.97
SPOCK3-206ENST00000502821 TEFQ10587 303 aa27.36■■□□□ 1.97
SPOCK3-206ENST00000502821 FLIIQ13045 1269 aa27.36■■□□□ 1.97
SPOCK3-206ENST00000502821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.36■■□□□ 1.97
SPOCK3-206ENST00000502821 DCTPP1Q9H773 170 aa27.36■■□□□ 1.97
SPOCK3-206ENST00000502821 SOS2Q07890 1332 aaPredicted RBP27.35■■□□□ 1.97
SPOCK3-206ENST00000502821 HEG1Q9ULI3 1381 aa27.33■■□□□ 1.96
SPOCK3-206ENST00000502821 HDGFL1Q5TGJ6 251 aa27.32■■□□□ 1.96
SPOCK3-206ENST00000502821 CEP85Q6P2H3 762 aa27.32■■□□□ 1.96
SPOCK3-206ENST00000502821 MPRIPQ6WCQ1 1025 aa27.32■■□□□ 1.96
SPOCK3-206ENST00000502821 ZNF335Q9H4Z2 1342 aaPredicted RBP27.31■■□□□ 1.96
SPOCK3-206ENST00000502821 BTBD11A6QL63 1104 aa27.31■■□□□ 1.96
SPOCK3-206ENST00000502821 PLEKHG5O94827 1062 aa27.31■■□□□ 1.96
SPOCK3-206ENST00000502821 MEIS3Q99687 375 aa27.31■■□□□ 1.96
SPOCK3-206ENST00000502821 LNPKQ9C0E8 428 aa27.31■■□□□ 1.96
SPOCK3-206ENST00000502821 SCN11AQ9UI33 1791 aa27.31■■□□□ 1.96
SPOCK3-206ENST00000502821 ANKRD45Q5TZF3 282 aa27.3■■□□□ 1.96
SPOCK3-206ENST00000502821 RAPGEF4Q8WZA2 1011 aa27.3■■□□□ 1.96
SPOCK3-206ENST00000502821 SLAIN2Q9P270 581 aa27.3■■□□□ 1.96
SPOCK3-206ENST00000502821 PKD1L3Q7Z443 1732 aa27.3■■□□□ 1.96
SPOCK3-206ENST00000502821 SEC24BO95487 1268 aa27.3■■□□□ 1.96
SPOCK3-206ENST00000502821 F6X3S4 739 aa27.28■■□□□ 1.96
SPOCK3-206ENST00000502821 TATP17735 454 aaPredicted RBP27.28■■□□□ 1.96
SPOCK3-206ENST00000502821 FKBP5Q13451 457 aaPredicted RBP27.28■■□□□ 1.96
SPOCK3-206ENST00000502821 BMP2KLQ5H9B9 411 aa27.27■■□□□ 1.96
SPOCK3-206ENST00000502821 CABLES1Q8TDN4 633 aa27.27■■□□□ 1.96
SPOCK3-206ENST00000502821 NLRP2Q9NX02 1062 aa27.27■■□□□ 1.96
SPOCK3-206ENST00000502821 UPF2Q9HAU5 1272 aaKnown RBP27.27■■□□□ 1.96
SPOCK3-206ENST00000502821 SPG7Q9UQ90 795 aa27.27■■□□□ 1.96
SPOCK3-206ENST00000502821 MEGF6O75095 1541 aa27.26■■□□□ 1.95
SPOCK3-206ENST00000502821 NHSL1Q5SYE7 1610 aa27.26■■□□□ 1.95
SPOCK3-206ENST00000502821 GNAI3P08754 354 aa27.25■■□□□ 1.95
SPOCK3-206ENST00000502821 SLC4A10Q6U841 1118 aa27.24■■□□□ 1.95
SPOCK3-206ENST00000502821 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
SPOCK3-206ENST00000502821 KCNQ3O43525 872 aa27.24■■□□□ 1.95
SPOCK3-206ENST00000502821 HMMRO75330 724 aa27.24■■□□□ 1.95
SPOCK3-206ENST00000502821 MRC1P22897 1456 aa27.24■■□□□ 1.95
SPOCK3-206ENST00000502821 GNAI2P04899 355 aa27.23■■□□□ 1.95
SPOCK3-206ENST00000502821 TBC1D32Q96NH3 1257 aa27.23■■□□□ 1.95
SPOCK3-206ENST00000502821 PHKG2P15735 406 aa27.22■■□□□ 1.95
SPOCK3-206ENST00000502821 KDM6AO15550 1401 aaPredicted RBP27.22■■□□□ 1.95
SPOCK3-206ENST00000502821 NECTIN2Q92692 538 aa27.21■■□□□ 1.95
SPOCK3-206ENST00000502821 GIGYF1O75420 1035 aaPredicted RBP27.21■■□□□ 1.95
SPOCK3-206ENST00000502821 CSB-PGBD3P0DP91 1061 aa27.21■■□□□ 1.95
SPOCK3-206ENST00000502821 PARP4Q9UKK3 1724 aaKnown RBP27.21■■□□□ 1.95
SPOCK3-206ENST00000502821 CHRNA2Q15822 529 aa27.2■■□□□ 1.94
SPOCK3-206ENST00000502821 IFNL2Q8IZJ0 200 aa27.2■■□□□ 1.94
SPOCK3-206ENST00000502821 MYT1Q01538 1121 aa27.19■■□□□ 1.94
SPOCK3-206ENST00000502821 PHAXQ9H814 394 aaKnown RBP27.19■■□□□ 1.94
SPOCK3-206ENST00000502821 DBF4Q9UBU7 674 aaPredicted RBP27.19■■□□□ 1.94
SPOCK3-206ENST00000502821 SLC52A2Q9HAB3 445 aa27.18■■□□□ 1.94
SPOCK3-206ENST00000502821 CHPF2Q9P2E5 772 aa27.18■■□□□ 1.94
SPOCK3-206ENST00000502821 EIF2S2P20042 333 aaKnown RBP27.17■■□□□ 1.94
SPOCK3-206ENST00000502821 HSP90AB1P08238 724 aaKnown RBP27.16■■□□□ 1.94
SPOCK3-206ENST00000502821 WDR17Q8IZU2 1322 aa27.16■■□□□ 1.94
SPOCK3-206ENST00000502821 DCAF5Q96JK2 942 aa27.16■■□□□ 1.94
SPOCK3-206ENST00000502821 ATP8B2P98198 1209 aa27.15■■□□□ 1.94
SPOCK3-206ENST00000502821 PLEKHM2Q8IWE5 1019 aa27.15■■□□□ 1.94
SPOCK3-206ENST00000502821 USP44Q9H0E7 712 aa27.15■■□□□ 1.94
SPOCK3-206ENST00000502821 COL5A2P05997 1499 aaPredicted RBP27.14■■□□□ 1.94
SPOCK3-206ENST00000502821 SRCIN1Q9C0H9 1055 aa27.13■■□□□ 1.93
SPOCK3-206ENST00000502821 PRDM11Q9NQV5 511 aa27.13■■□□□ 1.93
SPOCK3-206ENST00000502821 ZNF790Q6PG37 636 aa27.12■■□□□ 1.93
SPOCK3-206ENST00000502821 DNAAF4Q8WXU2 420 aa27.12■■□□□ 1.93
SPOCK3-206ENST00000502821 DAXXQ9UER7 740 aaPredicted RBP27.12■■□□□ 1.93
SPOCK3-206ENST00000502821 CYP27B1O15528 508 aa27.11■■□□□ 1.93
SPOCK3-206ENST00000502821 BEND3Q5T5X7 828 aa27.11■■□□□ 1.93
SPOCK3-206ENST00000502821 HYPKQ9NX55 129 aa27.11■■□□□ 1.93
SPOCK3-206ENST00000502821 ADCY9O60503 1353 aa27.11■■□□□ 1.93
SPOCK3-206ENST00000502821 IBTKQ9P2D0 1353 aaPredicted RBP27.11■■□□□ 1.93
SPOCK3-206ENST00000502821 EIF5BO60841 1220 aaKnown RBP27.1■■□□□ 1.93
SPOCK3-206ENST00000502821 C5P01031 1676 aa27.08■■□□□ 1.93
SPOCK3-206ENST00000502821 UBTFL1P0CB47 393 aaPredicted RBP27.08■■□□□ 1.93
SPOCK3-206ENST00000502821 C22orf23Q9BZE7 217 aa27.08■■□□□ 1.93
SPOCK3-206ENST00000502821 PI4KAP2A4QPH2 592 aa27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 BECN1Q14457 450 aa27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 TTC22Q5TAA0 569 aa27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 PI4KAP1Q8N8J0 262 aa27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 DDX21Q9NR30 783 aaKnown RBP eCLIP27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 CARD10Q9BWT7 1032 aa27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 OSBPL3Q9H4L5 887 aa27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 LRRFIP2Q9Y608 721 aaKnown RBP27.07■■□□□ 1.92
SPOCK3-206ENST00000502821 ALDH1L1O75891 902 aa27.06■■□□□ 1.92
SPOCK3-206ENST00000502821 KSR2Q6VAB6 950 aa27.06■■□□□ 1.92
SPOCK3-206ENST00000502821 NFATC2IPQ8NCF5 419 aa27.06■■□□□ 1.92
SPOCK3-206ENST00000502821 SSH3Q8TE77 659 aa27.05■■□□□ 1.92
SPOCK3-206ENST00000502821 GSPT1P15170 499 aaKnown RBP27.04■■□□□ 1.92
SPOCK3-206ENST00000502821 RBM25P49756 843 aaKnown RBP27.04■■□□□ 1.92
SPOCK3-206ENST00000502821 MFAP1P55081 439 aaKnown RBP27.04■■□□□ 1.92
SPOCK3-206ENST00000502821 CDC45O75419 566 aa27.04■■□□□ 1.92
SPOCK3-206ENST00000502821 PCDH11XQ9BZA7 1347 aa27.03■■□□□ 1.92
SPOCK3-206ENST00000502821 PCDH11YQ9BZA8 1340 aa27.03■■□□□ 1.92
SPOCK3-206ENST00000502821 PNMA6EA0A0J9YXQ4 647 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms