RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
CPNE4-202ENST00000502818 ADAMTS2O95450 1211 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 TAF7Q15545 349 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-202ENST00000502818 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 G2E3Q7L622 706 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 TMEM57Q8N5G2 664 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 PRAMEF22A3QJZ6 481 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 NUTM2BA6NNL0 878 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-202ENST00000502818 NUTM2EB1AL46 878 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-202ENST00000502818 IGHDP01880 384 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 PHKG2P15735 406 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-202ENST00000502818 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 ATF7IPQ6VMQ6 1270 aa9.37□□□□□ -0.91
CPNE4-202ENST00000502818 NUTM2AQ8IVF1 878 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-202ENST00000502818 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
CPNE4-202ENST00000502818 KDM6AO15550 1401 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-202ENST00000502818 C1orf141Q5JVX7 400 aa9.36□□□□□ -0.91
CPNE4-202ENST00000502818 AKT1S1Q96B36 256 aa9.36□□□□□ -0.91
CPNE4-202ENST00000502818 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CPNE4-202ENST00000502818 COL16A1Q07092 1604 aaPredicted RBP9.36□□□□□ -0.91
CPNE4-202ENST00000502818 TOM1O60784 492 aa9.35□□□□□ -0.91
CPNE4-202ENST00000502818 EVA1CP58658 441 aa9.35□□□□□ -0.91
CPNE4-202ENST00000502818 SLC39A6Q13433 755 aa9.35□□□□□ -0.91
CPNE4-202ENST00000502818 RNF216Q9NWF9 866 aaPredicted RBP9.35□□□□□ -0.91
CPNE4-202ENST00000502818 MVPQ14764 893 aaKnown RBP9.35□□□□□ -0.91
CPNE4-202ENST00000502818 PHLPP1O60346 1717 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
CPNE4-202ENST00000502818 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
CPNE4-202ENST00000502818 ITPRIPQ8IWB1 547 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 FTSJ3Q8IY81 847 aaKnown RBP9.34□□□□□ -0.91
CPNE4-202ENST00000502818 CARD10Q9BWT7 1032 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 KDM2BQ8NHM5 1336 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 ABCC6O95255 1503 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 C19orf67A6NJJ6 358 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 SLC4A2P04920 1241 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 TEFQ10587 303 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 OVOS2A0A0G2JMS6 1433 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 RGS12O14924 1447 aa9.34□□□□□ -0.91
CPNE4-202ENST00000502818 ANXA1P04083 346 aa9.33□□□□□ -0.92
CPNE4-202ENST00000502818 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
CPNE4-202ENST00000502818 KIF16BQ96L93 1317 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 F6X3S4 739 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 EIF2S2P20042 333 aaKnown RBP9.32□□□□□ -0.92
CPNE4-202ENST00000502818 DDX54Q8TDD1 881 aaKnown RBP9.32□□□□□ -0.92
CPNE4-202ENST00000502818 COL22A1Q8NFW1 1626 aaPredicted RBP9.32□□□□□ -0.92
CPNE4-202ENST00000502818 IL2RBP14784 551 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 IFNL2Q8IZJ0 200 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
CPNE4-202ENST00000502818 ZNF428Q96B54 188 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 C1orf115Q9H7X2 142 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 SLC52A2Q9HAB3 445 aa9.32□□□□□ -0.92
CPNE4-202ENST00000502818 ABCC4O15439 1325 aa9.31□□□□□ -0.92
CPNE4-202ENST00000502818 PHAXQ9H814 394 aaKnown RBP9.31□□□□□ -0.92
CPNE4-202ENST00000502818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.92
CPNE4-202ENST00000502818 IPO8O15397 1037 aaKnown RBP9.31□□□□□ -0.92
CPNE4-202ENST00000502818 PROSER3Q2NL68 480 aa9.31□□□□□ -0.92
CPNE4-202ENST00000502818 ADAMTS7Q9UKP4 1686 aa9.3□□□□□ -0.92
CPNE4-202ENST00000502818 ARHGAP45Q92619 1136 aa9.3□□□□□ -0.92
CPNE4-202ENST00000502818 ZBTB40Q9NUA8 1239 aa9.3□□□□□ -0.92
CPNE4-202ENST00000502818 PKD1L3Q7Z443 1732 aa9.3□□□□□ -0.92
CPNE4-202ENST00000502818 VIRMAQ69YN4 1812 aaKnown RBP9.3□□□□□ -0.92
CPNE4-202ENST00000502818 KDM3BQ7LBC6 1761 aa9.3□□□□□ -0.92
CPNE4-202ENST00000502818 ZBTB7BO15156 539 aaPredicted RBP9.29□□□□□ -0.92
CPNE4-202ENST00000502818 PIP4K2AP48426 406 aaPredicted RBP9.29□□□□□ -0.92
CPNE4-202ENST00000502818 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 CHPF2Q9P2E5 772 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 HEG1Q9ULI3 1381 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
CPNE4-202ENST00000502818 ZNF790Q6PG37 636 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 ZNF496Q96IT1 587 aaPredicted RBP9.29□□□□□ -0.92
CPNE4-202ENST00000502818 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 SHANK3Q9BYB0 1731 aa9.29□□□□□ -0.92
CPNE4-202ENST00000502818 SIPA1L3O60292 1781 aaPredicted RBP9.28□□□□□ -0.92
CPNE4-202ENST00000502818 COL14A1Q05707 1796 aaKnown RBP9.28□□□□□ -0.92
CPNE4-202ENST00000502818 DISP2A7MBM2 1401 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 HSPA1LP34931 641 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 FLIIQ13045 1269 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 PCDH11XQ9BZA7 1347 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 PCDH11YQ9BZA8 1340 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 DEKP35659 375 aaKnown RBP9.28□□□□□ -0.92
CPNE4-202ENST00000502818 CCDC30Q5VVM6 783 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 DDX19BQ9UMR2 479 aa9.28□□□□□ -0.92
CPNE4-202ENST00000502818 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.92
CPNE4-202ENST00000502818 CABP4P57796 275 aa9.27□□□□□ -0.93
CPNE4-202ENST00000502818 SLC4A10Q6U841 1118 aa9.27□□□□□ -0.93
CPNE4-202ENST00000502818 CENPQQ7L2Z9 268 aaPredicted RBP9.27□□□□□ -0.93
CPNE4-202ENST00000502818 SIRT2Q8IXJ6 389 aa9.27□□□□□ -0.93
CPNE4-202ENST00000502818 C8orf37Q96NL8 207 aa9.27□□□□□ -0.93
CPNE4-202ENST00000502818 API5Q9BZZ5 524 aaKnown RBP9.27□□□□□ -0.93
CPNE4-202ENST00000502818 USP16Q9Y5T5 823 aa9.27□□□□□ -0.93
CPNE4-202ENST00000502818 LRP6O75581 1613 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 PDIA6Q15084 440 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-202ENST00000502818 MEIS3Q99687 375 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 STK31Q9BXU1 1019 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms