RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 C4BP0C0L5 1744 aa34.28■■■■□ 3.08
PROM1-202ENST00000502501 LOC102724428A0A0B4J2F2 783 aa34.28■■■■□ 3.08
PROM1-202ENST00000502501 SIK1P57059 783 aa34.28■■■■□ 3.08
PROM1-202ENST00000502501 ZNF316A6NFI3 1004 aaPredicted RBP34.26■■■■□ 3.08
PROM1-202ENST00000502501 RNMTO43148 476 aaKnown RBP34.25■■■■□ 3.07
PROM1-202ENST00000502501 SLC52A2Q9HAB3 445 aa34.25■■■■□ 3.07
PROM1-202ENST00000502501 KCNQ4P56696 695 aa34.24■■■■□ 3.07
PROM1-202ENST00000502501 NFATC2IPQ8NCF5 419 aa34.24■■■■□ 3.07
PROM1-202ENST00000502501 PRKRIP1Q9H875 184 aaPredicted RBP34.24■■■■□ 3.07
PROM1-202ENST00000502501 SPON1Q9HCB6 807 aa34.24■■■■□ 3.07
PROM1-202ENST00000502501 PHACTR3Q96KR7 559 aa34.23■■■■□ 3.07
PROM1-202ENST00000502501 GNAT3A8MTJ3 354 aa34.22■■■■□ 3.07
PROM1-202ENST00000502501 COL5A3P25940 1745 aaPredicted RBP34.21■■■■□ 3.07
PROM1-202ENST00000502501 COL24A1Q17RW2 1714 aa34.21■■■■□ 3.07
PROM1-202ENST00000502501 SLC16A10Q8TF71 515 aa34.21■■■■□ 3.07
PROM1-202ENST00000502501 PDGFDQ9GZP0 370 aaPredicted RBP34.21■■■■□ 3.07
PROM1-202ENST00000502501 LGR6Q9HBX8 967 aa34.21■■■■□ 3.07
PROM1-202ENST00000502501 PNPLA7Q6ZV29 1317 aa34.21■■■■□ 3.07
PROM1-202ENST00000502501 CEMIPQ8WUJ3 1361 aa34.21■■■■□ 3.07
PROM1-202ENST00000502501 SIPA1L3O60292 1781 aaPredicted RBP34.21■■■■□ 3.07
PROM1-202ENST00000502501 MTFR1LQ9H019 292 aa34.2■■■■□ 3.07
PROM1-202ENST00000502501 TFCP2L1Q9NZI6 479 aa34.2■■■■□ 3.07
PROM1-202ENST00000502501 PNNQ9H307 717 aaKnown RBP34.18■■■■□ 3.06
PROM1-202ENST00000502501 UBR3Q6ZT12 1888 aa34.18■■■■□ 3.06
PROM1-202ENST00000502501 UBR2Q8IWV8 1755 aa34.16■■■■□ 3.06
PROM1-202ENST00000502501 ATP6V1AP38606 617 aa34.16■■■■□ 3.06
PROM1-202ENST00000502501 FLAD1Q8NFF5 587 aa34.16■■■■□ 3.06
PROM1-202ENST00000502501 ITPK1Q13572 414 aa34.15■■■■□ 3.06
PROM1-202ENST00000502501 HTATSF1O43719 755 aaKnown RBP34.14■■■■□ 3.06
PROM1-202ENST00000502501 SLC4A9Q96Q91 983 aa34.14■■■■□ 3.06
PROM1-202ENST00000502501 PLEKHF1Q96S99 279 aa34.14■■■■□ 3.06
PROM1-202ENST00000502501 LINC00116Q8NCU8 138 aa34.13■■■■□ 3.05
PROM1-202ENST00000502501 IL17REQ8NFR9 667 aa34.13■■■■□ 3.05
PROM1-202ENST00000502501 KCPQ6ZWJ8 1503 aa34.13■■■■□ 3.05
PROM1-202ENST00000502501 TJP1Q07157 1748 aa34.13■■■■□ 3.05
PROM1-202ENST00000502501 NEFMP07197 916 aa34.12■■■■□ 3.05
PROM1-202ENST00000502501 ZBTB7AO95365 584 aa34.11■■■■□ 3.05
PROM1-202ENST00000502501 PTGER2P43116 358 aa34.11■■■■□ 3.05
PROM1-202ENST00000502501 AK7Q96M32 723 aa34.11■■■■□ 3.05
PROM1-202ENST00000502501 SGIP1Q9BQI5 828 aa34.1■■■■□ 3.05
PROM1-202ENST00000502501 CNTNAP4Q9C0A0 1308 aa34.09■■■■□ 3.05
PROM1-202ENST00000502501 SSFA2P28290 1259 aa34.09■■■■□ 3.05
PROM1-202ENST00000502501 TEFQ10587 303 aa34.08■■■■□ 3.05
PROM1-202ENST00000502501 RC3H1Q5TC82 1133 aaKnown RBP34.08■■■■□ 3.05
PROM1-202ENST00000502501 RBM42Q9BTD8 480 aaKnown RBP34.08■■■■□ 3.05
PROM1-202ENST00000502501 VSIG10Q8N0Z9 540 aa34.06■■■■□ 3.04
PROM1-202ENST00000502501 DLG5Q8TDM6 1919 aa34.05■■■■□ 3.04
PROM1-202ENST00000502501 COL23A1Q86Y22 540 aaPredicted RBP34.05■■■■□ 3.04
PROM1-202ENST00000502501 RTF1Q92541 710 aaKnown RBP34.05■■■■□ 3.04
PROM1-202ENST00000502501 PTCD1O75127 700 aaKnown RBP34.04■■■■□ 3.04
PROM1-202ENST00000502501 MAPK8IP3Q9UPT6 1336 aa34.04■■■■□ 3.04
PROM1-202ENST00000502501 ADRA2BP18089 450 aa34.01■■■■□ 3.03
PROM1-202ENST00000502501 NFE2L2Q16236 605 aa34.01■■■■□ 3.03
PROM1-202ENST00000502501 ATF5Q9Y2D1 282 aaPredicted RBP34.01■■■■□ 3.03
PROM1-202ENST00000502501 MYH14Q7Z406 1995 aaKnown RBP34■■■■□ 3.03
PROM1-202ENST00000502501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.99■■■■□ 3.03
PROM1-202ENST00000502501 GNPATO15228 680 aa33.99■■■■□ 3.03
PROM1-202ENST00000502501 SLC39A6Q13433 755 aa33.99■■■■□ 3.03
PROM1-202ENST00000502501 ZNF790Q6PG37 636 aa33.99■■■■□ 3.03
PROM1-202ENST00000502501 AMIGO3Q86WK7 504 aa33.99■■■■□ 3.03
PROM1-202ENST00000502501 TTC5Q8N0Z6 440 aa33.99■■■■□ 3.03
PROM1-202ENST00000502501 PPP1R1BQ9UD71 204 aaPredicted RBP33.99■■■■□ 3.03
PROM1-202ENST00000502501 WDR43Q15061 677 aaKnown RBP eCLIP33.96■■■■□ 3.03
PROM1-202ENST00000502501 RTCBQ9Y3I0 505 aaKnown RBP33.96■■■■□ 3.03
PROM1-202ENST00000502501 MCM10Q7L590 875 aa33.95■■■■□ 3.03
PROM1-202ENST00000502501 RPS6KA4O75676 772 aa33.94■■■■□ 3.02
PROM1-202ENST00000502501 POLD1P28340 1107 aa33.94■■■■□ 3.02
PROM1-202ENST00000502501 BTBD11A6QL63 1104 aa33.93■■■■□ 3.02
PROM1-202ENST00000502501 CRKLP46109 303 aaKnown RBP33.93■■■■□ 3.02
PROM1-202ENST00000502501 HEG1Q9ULI3 1381 aa33.93■■■■□ 3.02
PROM1-202ENST00000502501 ARXQ96QS3 562 aa33.92■■■■□ 3.02
PROM1-202ENST00000502501 C4AP0C0L4 1744 aa33.92■■■■□ 3.02
PROM1-202ENST00000502501 MSH5O43196 834 aa33.91■■■■□ 3.02
PROM1-202ENST00000502501 DNAJC10Q8IXB1 793 aa33.91■■■■□ 3.02
PROM1-202ENST00000502501 ZNF496Q96IT1 587 aaPredicted RBP33.91■■■■□ 3.02
PROM1-202ENST00000502501 PHF14O94880 888 aa33.9■■■■□ 3.02
PROM1-202ENST00000502501 CYP19A1P11511 503 aaPredicted RBP33.9■■■■□ 3.02
PROM1-202ENST00000502501 TRAPPC3LQ5T215 181 aa33.9■■■■□ 3.02
PROM1-202ENST00000502501 FMNL2Q96PY5 1086 aa33.9■■■■□ 3.02
PROM1-202ENST00000502501 TEX13AQ9BXU3 409 aaPredicted RBP33.9■■■■□ 3.02
PROM1-202ENST00000502501 RUNDC1Q96C34 613 aa33.89■■■■□ 3.02
PROM1-202ENST00000502501 KDM3BQ7LBC6 1761 aa33.89■■■■□ 3.02
PROM1-202ENST00000502501 TAF7Q15545 349 aaPredicted RBP33.88■■■■□ 3.01
PROM1-202ENST00000502501 INTS5Q6P9B9 1019 aaKnown RBP33.88■■■■□ 3.01
PROM1-202ENST00000502501 CCDC87Q9NVE4 849 aa33.88■■■■□ 3.01
PROM1-202ENST00000502501 ADAMTS8Q9UP79 889 aa33.88■■■■□ 3.01
PROM1-202ENST00000502501 ANP32CO43423 234 aa33.87■■■■□ 3.01
PROM1-202ENST00000502501 LMOD3Q0VAK6 560 aa33.87■■■■□ 3.01
PROM1-202ENST00000502501 DCTN1Q14203 1278 aa33.87■■■■□ 3.01
PROM1-202ENST00000502501 TMPOP42166 694 aaKnown RBP33.86■■■■□ 3.01
PROM1-202ENST00000502501 PNISRQ8TF01 805 aaKnown RBP33.86■■■■□ 3.01
PROM1-202ENST00000502501 STARD3NLO95772 234 aa33.85■■■■□ 3.01
PROM1-202ENST00000502501 SOS1Q07889 1333 aaPredicted RBP33.83■■■■□ 3.01
PROM1-202ENST00000502501 ARHGEF1Q92888 912 aaKnown RBP33.83■■■■□ 3.01
PROM1-202ENST00000502501 RIPK4P57078 832 aa33.82■■■■□ 3
PROM1-202ENST00000502501 FHDC1Q9C0D6 1143 aaPredicted RBP33.82■■■■□ 3
PROM1-202ENST00000502501 SMIM5Q71RC9 77 aa33.81■■■■□ 3
PROM1-202ENST00000502501 BABAM1Q9NWV8 329 aa33.81■■■■□ 3
PROM1-202ENST00000502501 RFC4P35249 363 aa33.8■■■■□ 3
PROM1-202ENST00000502501 NLGN1Q8N2Q7 840 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms