RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 SSFA2P28290 1259 aa28.38■■■□□ 2.13
SNF8-202ENST00000502492 OSBPL3Q9H4L5 887 aa28.38■■■□□ 2.13
SNF8-202ENST00000502492 ATF3P18847 181 aa28.37■■■□□ 2.13
SNF8-202ENST00000502492 EYA1Q99502 592 aa28.37■■■□□ 2.13
SNF8-202ENST00000502492 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
SNF8-202ENST00000502492 APBB1O00213 710 aa28.36■■■□□ 2.13
SNF8-202ENST00000502492 F6X3S4 739 aa28.35■■■□□ 2.13
SNF8-202ENST00000502492 HTATSF1O43719 755 aaKnown RBP28.35■■■□□ 2.13
SNF8-202ENST00000502492 SLC4A10Q6U841 1118 aa28.34■■■□□ 2.13
SNF8-202ENST00000502492 CADPS2Q86UW7 1296 aa28.34■■■□□ 2.13
SNF8-202ENST00000502492 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.34■■■□□ 2.13
SNF8-202ENST00000502492 REC8O95072 547 aa28.34■■■□□ 2.13
SNF8-202ENST00000502492 AMPHP49418 695 aa28.33■■■□□ 2.13
SNF8-202ENST00000502492 LRRC37A3O60309 1634 aa28.33■■■□□ 2.13
SNF8-202ENST00000502492 LTBP4Q8N2S1 1624 aa28.33■■■□□ 2.13
SNF8-202ENST00000502492 PIK3C2AO00443 1686 aa28.32■■■□□ 2.12
SNF8-202ENST00000502492 GOLGA6L22H0YM25 854 aa28.32■■■□□ 2.12
SNF8-202ENST00000502492 GAS2L3Q86XJ1 694 aa28.32■■■□□ 2.12
SNF8-202ENST00000502492 NGDNQ8NEJ9 315 aaKnown RBP28.32■■■□□ 2.12
SNF8-202ENST00000502492 C1orf167Q5SNV9 1468 aa28.32■■■□□ 2.12
SNF8-202ENST00000502492 MST1RQ04912 1400 aa28.32■■■□□ 2.12
SNF8-202ENST00000502492 BAG4O95429 457 aaKnown RBP28.31■■■□□ 2.12
SNF8-202ENST00000502492 GNAI2P04899 355 aa28.31■■■□□ 2.12
SNF8-202ENST00000502492 PDE1AP54750 535 aa28.31■■■□□ 2.12
SNF8-202ENST00000502492 ESCO1Q5FWF5 840 aa28.31■■■□□ 2.12
SNF8-202ENST00000502492 STK31Q9BXU1 1019 aa28.31■■■□□ 2.12
SNF8-202ENST00000502492 PHF8Q9UPP1 1060 aa28.31■■■□□ 2.12
SNF8-202ENST00000502492 CYP2E1P05181 493 aaPredicted RBP28.3■■■□□ 2.12
SNF8-202ENST00000502492 NUCB2P80303 420 aa28.3■■■□□ 2.12
SNF8-202ENST00000502492 ERC2O15083 957 aa28.3■■■□□ 2.12
SNF8-202ENST00000502492 ST18O60284 1047 aa28.29■■■□□ 2.12
SNF8-202ENST00000502492 ORAI2Q96SN7 254 aa28.28■■■□□ 2.12
SNF8-202ENST00000502492 CWC22Q9HCG8 908 aaKnown RBP28.28■■■□□ 2.12
SNF8-202ENST00000502492 SALL3Q9BXA9 1300 aa28.28■■■□□ 2.12
SNF8-202ENST00000502492 KLHL40Q2TBA0 621 aa28.27■■■□□ 2.12
SNF8-202ENST00000502492 CCDC30Q5VVM6 783 aa28.27■■■□□ 2.12
SNF8-202ENST00000502492 FAM208AQ9UK61 1670 aaKnown RBP28.26■■■□□ 2.12
SNF8-202ENST00000502492 FLIIQ13045 1269 aa28.26■■■□□ 2.12
SNF8-202ENST00000502492 SOS1Q07889 1333 aaPredicted RBP28.26■■■□□ 2.12
SNF8-202ENST00000502492 GNAT3A8MTJ3 354 aa28.26■■■□□ 2.11
SNF8-202ENST00000502492 GNAI3P08754 354 aa28.25■■■□□ 2.11
SNF8-202ENST00000502492 IBTKQ9P2D0 1353 aaPredicted RBP28.25■■■□□ 2.11
SNF8-202ENST00000502492 AK9Q5TCS8 1911 aa28.24■■■□□ 2.11
SNF8-202ENST00000502492 EXOC6BQ9Y2D4 811 aa28.24■■■□□ 2.11
SNF8-202ENST00000502492 NLRP6P59044 892 aa28.23■■■□□ 2.11
SNF8-202ENST00000502492 CACNA1FO60840 1977 aa28.23■■■□□ 2.11
SNF8-202ENST00000502492 HOXC9P31274 260 aa28.23■■■□□ 2.11
SNF8-202ENST00000502492 CLCN1P35523 988 aa28.23■■■□□ 2.11
SNF8-202ENST00000502492 ATP8B2P98198 1209 aa28.23■■■□□ 2.11
SNF8-202ENST00000502492 BABAM1Q9NWV8 329 aa28.23■■■□□ 2.11
SNF8-202ENST00000502492 TUBGCP6Q96RT7 1819 aa28.22■■■□□ 2.11
SNF8-202ENST00000502492 FKBP5Q13451 457 aaPredicted RBP28.22■■■□□ 2.11
SNF8-202ENST00000502492 LRRCC1Q9C099 1032 aa28.22■■■□□ 2.11
SNF8-202ENST00000502492 MARF1Q9Y4F3 1742 aaKnown RBP28.22■■■□□ 2.11
SNF8-202ENST00000502492 DDX49Q9Y6V7 483 aaKnown RBP28.21■■■□□ 2.11
SNF8-202ENST00000502492 USP54Q70EL1 1684 aa28.21■■■□□ 2.11
SNF8-202ENST00000502492 N4BP2Q86UW6 1770 aaPredicted RBP28.2■■■□□ 2.1
SNF8-202ENST00000502492 IL17REQ8NFR9 667 aa28.2■■■□□ 2.1
SNF8-202ENST00000502492 MAP3K5Q99683 1374 aa28.2■■■□□ 2.1
SNF8-202ENST00000502492 PNMA6EA0A0J9YXQ4 647 aa28.19■■■□□ 2.1
SNF8-202ENST00000502492 PKP1Q13835 747 aa28.19■■■□□ 2.1
SNF8-202ENST00000502492 SLAIN2Q9P270 581 aa28.19■■■□□ 2.1
SNF8-202ENST00000502492 PXDNLA1KZ92 1463 aa28.19■■■□□ 2.1
SNF8-202ENST00000502492 MX1P20591 662 aa28.18■■■□□ 2.1
SNF8-202ENST00000502492 ZGPATQ8N5A5 531 aaKnown RBP28.18■■■□□ 2.1
SNF8-202ENST00000502492 KIF1AQ12756 1690 aa28.17■■■□□ 2.1
SNF8-202ENST00000502492 TAF7Q15545 349 aaPredicted RBP28.17■■■□□ 2.1
SNF8-202ENST00000502492 MCTP1Q6DN14 999 aa28.17■■■□□ 2.1
SNF8-202ENST00000502492 ESYT1Q9BSJ8 1104 aa28.17■■■□□ 2.1
SNF8-202ENST00000502492 STAP2Q9UGK3 403 aa28.17■■■□□ 2.1
SNF8-202ENST00000502492 LMBRD1Q9NUN5 540 aa28.17■■■□□ 2.1
SNF8-202ENST00000502492 PSME1Q06323 249 aa28.15■■■□□ 2.1
SNF8-202ENST00000502492 TSHZ3Q63HK5 1081 aa28.15■■■□□ 2.1
SNF8-202ENST00000502492 NECTIN2Q92692 538 aa28.14■■■□□ 2.1
SNF8-202ENST00000502492 ZDHHC9Q9Y397 364 aa28.14■■■□□ 2.1
SNF8-202ENST00000502492 SRCIN1Q9C0H9 1055 aa28.14■■■□□ 2.09
SNF8-202ENST00000502492 USP44Q9H0E7 712 aa28.14■■■□□ 2.09
SNF8-202ENST00000502492 LRRFIP2Q9Y608 721 aaKnown RBP28.14■■■□□ 2.09
SNF8-202ENST00000502492 ZNF445P59923 1031 aa28.13■■■□□ 2.09
SNF8-202ENST00000502492 BRINP3Q76B58 766 aa28.13■■■□□ 2.09
SNF8-202ENST00000502492 CHMLP26374 656 aa28.12■■■□□ 2.09
SNF8-202ENST00000502492 ESPNB1AK53 854 aa28.12■■■□□ 2.09
SNF8-202ENST00000502492 NUTM2GQ5VZR2 741 aa28.12■■■□□ 2.09
SNF8-202ENST00000502492 MCM2P49736 904 aa28.11■■■□□ 2.09
SNF8-202ENST00000502492 NEK4P51957 841 aa28.11■■■□□ 2.09
SNF8-202ENST00000502492 IL17RAQ96F46 866 aa28.11■■■□□ 2.09
SNF8-202ENST00000502492 AOX1Q06278 1338 aa28.1■■■□□ 2.09
SNF8-202ENST00000502492 ANAPC15P60006 121 aa28.1■■■□□ 2.09
SNF8-202ENST00000502492 ABTB2Q8N961 1025 aa28.1■■■□□ 2.09
SNF8-202ENST00000502492 XPCQ01831 940 aaPredicted RBP28.09■■■□□ 2.09
SNF8-202ENST00000502492 SSH3Q8TE77 659 aa28.09■■■□□ 2.09
SNF8-202ENST00000502492 TMX3Q96JJ7 454 aa28.09■■■□□ 2.09
SNF8-202ENST00000502492 MCCP23508 829 aa28.08■■■□□ 2.09
SNF8-202ENST00000502492 KRT28Q7Z3Y7 464 aa28.08■■■□□ 2.09
SNF8-202ENST00000502492 ERBB4Q15303 1308 aa28.08■■■□□ 2.09
SNF8-202ENST00000502492 UBTFL1P0CB47 393 aaPredicted RBP28.08■■■□□ 2.09
SNF8-202ENST00000502492 NASPP49321 788 aaPredicted RBP28.08■■■□□ 2.09
SNF8-202ENST00000502492 TRIM44Q96DX7 344 aaPredicted RBP28.08■■■□□ 2.09
SNF8-202ENST00000502492 PPP1R9BQ96SB3 815 aa28.08■■■□□ 2.09
SNF8-202ENST00000502492 NPHP3Q7Z494 1330 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms