RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 MAMSTRQ6ZN01 415 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 GAS2L2Q8NHY3 880 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 PNISRQ8TF01 805 aaKnown RBP4.82□□□□□ -1.64
SUB1-202ENST00000502453 HLA-CQ95604 372 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 NAP1L4Q99733 375 aaKnown RBP4.82□□□□□ -1.64
SUB1-202ENST00000502453 NPHP1O15259 732 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 FDX1P10109 184 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 FKBP4Q02790 459 aaKnown RBP eCLIP4.82□□□□□ -1.64
SUB1-202ENST00000502453 SYCP2LQ5T4T6 812 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 SETDB2Q96T68 719 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 BDNFP23560 247 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 GYS2P54840 703 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 FAM193AP78312 1265 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 NAA30Q147X3 362 aaPredicted RBP4.81□□□□□ -1.64
SUB1-202ENST00000502453 EGFL7Q9UHF1 273 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 CKAP2LQ8IYA6 745 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 GMLQ99445 158 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 EID1Q9Y6B2 187 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 ANP32CO43423 234 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 AXDND1Q5T1B0 1012 aaPredicted RBP4.81□□□□□ -1.64
SUB1-202ENST00000502453 RDH13Q8NBN7 331 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 FANCLQ9NW38 375 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 KAT6BQ8WYB5 2073 aa4.81□□□□□ -1.64
SUB1-202ENST00000502453 FBXO45P0C2W1 286 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 CBLBQ13191 982 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 DHX8Q14562 1220 aaKnown RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 SWI5Q1ZZU3 235 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 AMOTL1Q8IY63 956 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 IL17RAQ96F46 866 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 EMILIN1Q9Y6C2 1016 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 PLIN1O60240 522 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 PLCG2P16885 1265 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 RACK1P63244 317 aaKnown RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 METTL5Q9NRN9 209 aaKnown RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 MAP3K20Q9NYL2 800 aaKnown RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 ATP5J2-PTCD1G3V325 749 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 PRPF38BQ5VTL8 546 aaKnown RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 USP48Q86UV5 1035 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 RNPC3Q96LT9 517 aaKnown RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 HINFPQ9BQA5 517 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 CYLDQ9NQC7 956 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 POTEB2H3BUK9 544 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 PHF14O94880 888 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 PDILTQ8N807 584 aa4.8□□□□□ -1.64
SUB1-202ENST00000502453 BSDC1Q9NW68 430 aaPredicted RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 CXXC1Q9P0U4 656 aaPredicted RBP4.8□□□□□ -1.64
SUB1-202ENST00000502453 THRAP3Q9Y2W1 955 aaKnown RBP4.79□□□□□ -1.64
SUB1-202ENST00000502453 C6orf229H3BNL8 230 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 UBE4AQ14139 1066 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 MYBPC2Q14324 1141 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 ECM1Q16610 540 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 CFAP99D6REC4 459 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 CDC45O75419 566 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 HCLS1P14317 486 aaPredicted RBP4.79□□□□□ -1.64
SUB1-202ENST00000502453 COL19A1Q14993 1142 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 ZNF280DQ6N043 979 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 SULF1Q8IWU6 871 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 METRNQ9UJH8 293 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 RBM19Q9Y4C8 960 aaKnown RBP4.79□□□□□ -1.64
SUB1-202ENST00000502453 MRVI1Q9Y6F6 885 aa4.79□□□□□ -1.64
SUB1-202ENST00000502453 RCCD1A6NED2 376 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 TNFRSF10BO14763 440 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 SEC24BO95487 1268 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 MMP14P50281 582 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 CLDN10P78369 228 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 GLIPR1L2Q4G1C9 344 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 C10orf62Q5T681 223 aaPredicted RBP4.78□□□□□ -1.64
SUB1-202ENST00000502453 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 CUX2O14529 1486 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.78□□□□□ -1.64
SUB1-202ENST00000502453 C3orf80F5H4A9 247 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 PRPF40AO75400 957 aaKnown RBP4.78□□□□□ -1.64
SUB1-202ENST00000502453 FOSP01100 380 aaPredicted RBP4.78□□□□□ -1.64
SUB1-202ENST00000502453 CREBRFQ8IUR6 639 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 SLF2Q8IX21 1173 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 KANSL2Q9H9L4 492 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 PCDHGC3Q9UN70 934 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 LIG1P18858 919 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 MTMR2Q13614 643 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 RINLQ6ZS11 566 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 TMC4Q7Z404 712 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 SCYL1Q96KG9 808 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 HOMER2Q9NSB8 354 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 PCDHGA10Q9Y5H3 936 aa4.78□□□□□ -1.64
SUB1-202ENST00000502453 EPB41L2O43491 1005 aaKnown RBP4.77□□□□□ -1.65
SUB1-202ENST00000502453 NRDCO43847 1150 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 SSBP05455 408 aaKnown RBP eCLIP4.77□□□□□ -1.65
SUB1-202ENST00000502453 KRT18P05783 430 aaKnown RBP4.77□□□□□ -1.65
SUB1-202ENST00000502453 CNGA1P29973 690 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 NR1H3Q13133 447 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 OCLNQ16625 522 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 IER5LQ5T953 404 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 PLEKHM2Q8IWE5 1019 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 TRIM55Q9BYV6 548 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 PER1O15534 1290 aaPredicted RBP4.77□□□□□ -1.65
SUB1-202ENST00000502453 NDUFB5O43674 189 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 FGRP09769 529 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 CD53P19397 219 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 ATP2B2Q01814 1243 aa4.77□□□□□ -1.65
SUB1-202ENST00000502453 TAS1R3Q7RTX0 852 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms