RNA–Protein interactions for RNA: ENST00000499860.6

CD164-206, Transcript of CD164 molecule, humanhuman

TSL 1 (best)

Gene CD164, Length 2,845 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-206ENST00000499860 USP54Q70EL1 1684 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 TAF4O00268 1085 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 ANP32AP39687 249 aaKnown RBP2.94□□□□□ -1.94
CD164-206ENST00000499860 HAP1P54257 671 aaPredicted RBP2.94□□□□□ -1.94
CD164-206ENST00000499860 KIF12Q96FN5 646 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 IPO9Q96P70 1041 aaKnown RBP2.94□□□□□ -1.94
CD164-206ENST00000499860 BEGAINQ9BUH8 593 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 TIMELESSQ9UNS1 1208 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 MIA2Q96PC5 1412 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 SCAPERQ9BY12 1400 aa2.94□□□□□ -1.94
CD164-206ENST00000499860 CCER2I3L3R5 266 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 BMP8BP34820 402 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 PPP4R2Q9NY27 417 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 BRPF3Q9ULD4 1205 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 IFT172Q9UG01 1749 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 CRYBG1Q9Y4K1 1723 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 WNK3Q9BYP7 1800 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 DEFB123Q8N688 67 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 USP35Q9P2H5 1018 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 SLIT3O75094 1523 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 TRPM2O94759 1503 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 TRPM1Q7Z4N2 1603 aa2.93□□□□□ -1.94
CD164-206ENST00000499860 PRR33A8MZF0 331 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 IRX6P78412 446 aaPredicted RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 VARS2Q5ST30 1063 aaKnown RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 CIZ1Q9ULV3 898 aaPredicted RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 GCN1Q92616 2671 aaKnown RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 ABCC6O95255 1503 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 PPP1R15AO75807 674 aaPredicted RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 NEFMP07197 916 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 RSPH4AQ5TD94 716 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 TRIOBPQ9H2D6 2365 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 PLCH1Q4KWH8 1693 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 A0A0G2JS52 829 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 MED19A0JLT2 244 aaPredicted RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 SYNCRIPO60506 623 aaKnown RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 NPHP4O75161 1426 aaPredicted RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 CDC42BPGQ6DT37 1551 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 FAM43AQ8N2R8 423 aa2.92□□□□□ -1.94
CD164-206ENST00000499860 ATXN2LQ8WWM7 1075 aaKnown RBP2.92□□□□□ -1.94
CD164-206ENST00000499860 COL4A4P53420 1690 aaPredicted RBP2.91□□□□□ -1.94
CD164-206ENST00000499860 DCAF8Q5TAQ9 597 aa2.91□□□□□ -1.94
CD164-206ENST00000499860 ZNF467Q7Z7K2 595 aaPredicted RBP2.91□□□□□ -1.94
CD164-206ENST00000499860 ARXQ96QS3 562 aa2.91□□□□□ -1.94
CD164-206ENST00000499860 NRXN3Q9Y4C0 1643 aa2.91□□□□□ -1.94
CD164-206ENST00000499860 NRAPQ86VF7 1730 aa2.91□□□□□ -1.94
CD164-206ENST00000499860 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
CD164-206ENST00000499860 EN1Q05925 392 aaPredicted RBP2.91□□□□□ -1.94
CD164-206ENST00000499860 MTFR1LQ9H019 292 aa2.91□□□□□ -1.94
CD164-206ENST00000499860 DHX29Q7Z478 1369 aaKnown RBP2.9□□□□□ -1.94
CD164-206ENST00000499860 NOS1P29475 1434 aa2.9□□□□□ -1.94
CD164-206ENST00000499860 VPS8Q8N3P4 1428 aa2.9□□□□□ -1.94
CD164-206ENST00000499860 SETD5Q9C0A6 1442 aa2.9□□□□□ -1.94
CD164-206ENST00000499860 LCE2BO14633 110 aa2.9□□□□□ -1.94
CD164-206ENST00000499860 ONECUT3O60422 494 aaPredicted RBP2.9□□□□□ -1.94
CD164-206ENST00000499860 SIX3O95343 332 aaPredicted RBP2.9□□□□□ -1.94
CD164-206ENST00000499860 IRX5P78411 483 aaPredicted RBP2.9□□□□□ -1.94
CD164-206ENST00000499860 C3orf67Q6ZVT6 689 aa2.9□□□□□ -1.94
CD164-206ENST00000499860 PAXIP1Q6ZW49 1069 aaPredicted RBP2.9□□□□□ -1.94
CD164-206ENST00000499860 A0A0U1RQG5 324 aaPredicted RBP2.9□□□□□ -1.95
CD164-206ENST00000499860 SMIM22K7EJ46 135 aa2.9□□□□□ -1.95
CD164-206ENST00000499860 ANP32CO43423 234 aa2.9□□□□□ -1.95
CD164-206ENST00000499860 DDX10Q13206 875 aaKnown RBP2.9□□□□□ -1.95
CD164-206ENST00000499860 B4GALNT3Q6L9W6 998 aa2.9□□□□□ -1.95
CD164-206ENST00000499860 ZNF710Q8N1W2 664 aa2.9□□□□□ -1.95
CD164-206ENST00000499860 LAS1LQ9Y4W2 734 aaKnown RBP2.9□□□□□ -1.95
CD164-206ENST00000499860 SH3TC1Q8TE82 1336 aa2.9□□□□□ -1.95
CD164-206ENST00000499860 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.9□□□□□ -1.95
CD164-206ENST00000499860 PPM1GO15355 546 aaPredicted RBP2.89□□□□□ -1.95
CD164-206ENST00000499860 FGD1P98174 961 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 AAMPQ13685 434 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 EFCAB2Q5VUJ9 269 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 OCEL1Q9H607 264 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 PPIP5K1Q6PFW1 1433 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 ANKRD11Q6UB99 2663 aaPredicted RBP2.89□□□□□ -1.95
CD164-206ENST00000499860 LTBP1Q14766 1721 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 CCDC194A0A1B0GVG4 234 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 RRP9O43818 475 aaKnown RBP2.89□□□□□ -1.95
CD164-206ENST00000499860 ZIC2O95409 532 aaPredicted RBP2.89□□□□□ -1.95
CD164-206ENST00000499860 RBM10P98175 930 aaKnown RBP2.89□□□□□ -1.95
CD164-206ENST00000499860 PDE4CQ08493 712 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 KRTAP1-3Q8IUG1 177 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 ZFYVE9O95405 1425 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 GLI3P10071 1580 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 THSD7AQ9UPZ6 1657 aa2.89□□□□□ -1.95
CD164-206ENST00000499860 HNRNPUQ00839 825 aaKnown RBP eCLIP2.88□□□□□ -1.95
CD164-206ENST00000499860 DGLUCYQ7Z3D6 616 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 CCDC61Q9Y6R9 512 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 TNRQ92752 1358 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 NRXN1Q9ULB1 1477 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 PROB1E7EW31 1015 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 CHGAP10645 457 aaKnown RBP2.88□□□□□ -1.95
CD164-206ENST00000499860 HSP90AA2PQ14568 343 aaPredicted RBP2.88□□□□□ -1.95
CD164-206ENST00000499860 LRSAM1Q6UWE0 723 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 RBM27Q9P2N5 1060 aaKnown RBP2.88□□□□□ -1.95
CD164-206ENST00000499860 USP21Q9UK80 565 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 FMN2Q9NZ56 1722 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 PPLO60437 1756 aa2.88□□□□□ -1.95
CD164-206ENST00000499860 ITSN1Q15811 1721 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms