RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 FAM182BQ5T319 152 aa25.53■■□□□ 1.68
LINC01550-201ENST00000499006 CDCA7LQ96GN5 454 aa25.52■■□□□ 1.68
LINC01550-201ENST00000499006 CFAP44Q96MT7 982 aa25.52■■□□□ 1.68
LINC01550-201ENST00000499006 IFT57Q9NWB7 429 aa25.52■■□□□ 1.68
LINC01550-201ENST00000499006 TAF7Q15545 349 aaPredicted RBP25.51■■□□□ 1.67
LINC01550-201ENST00000499006 NFATC2IPQ8NCF5 419 aa25.51■■□□□ 1.67
LINC01550-201ENST00000499006 CABP4P57796 275 aa25.5■■□□□ 1.67
LINC01550-201ENST00000499006 SLFN5Q08AF3 891 aa25.5■■□□□ 1.67
LINC01550-201ENST00000499006 UBR2Q8IWV8 1755 aa25.49■■□□□ 1.67
LINC01550-201ENST00000499006 CHL1O00533 1208 aa25.49■■□□□ 1.67
LINC01550-201ENST00000499006 GNAI1P63096 354 aa25.49■■□□□ 1.67
LINC01550-201ENST00000499006 TRMT2AQ8IZ69 625 aaKnown RBP25.49■■□□□ 1.67
LINC01550-201ENST00000499006 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
LINC01550-201ENST00000499006 BTAF1O14981 1849 aa25.49■■□□□ 1.67
LINC01550-201ENST00000499006 E9PSI1 815 aa25.48■■□□□ 1.67
LINC01550-201ENST00000499006 PRIM1P49642 420 aaKnown RBP25.47■■□□□ 1.67
LINC01550-201ENST00000499006 FAM196AQ6ZSG2 479 aa25.47■■□□□ 1.67
LINC01550-201ENST00000499006 ACSBG1Q96GR2 724 aa25.47■■□□□ 1.67
LINC01550-201ENST00000499006 TMOD3Q9NYL9 352 aa25.47■■□□□ 1.67
LINC01550-201ENST00000499006 PIGBQ92521 554 aa25.46■■□□□ 1.67
LINC01550-201ENST00000499006 MBIPQ9NS73 344 aa25.46■■□□□ 1.67
LINC01550-201ENST00000499006 MIS18AQ9NYP9 233 aa25.46■■□□□ 1.67
LINC01550-201ENST00000499006 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
LINC01550-201ENST00000499006 BTBD11A6QL63 1104 aa25.45■■□□□ 1.66
LINC01550-201ENST00000499006 KCNQ2O43526 872 aa25.44■■□□□ 1.66
LINC01550-201ENST00000499006 DUSP27Q5VZP5 1158 aa25.44■■□□□ 1.66
LINC01550-201ENST00000499006 FANCIQ9NVI1 1328 aa25.44■■□□□ 1.66
LINC01550-201ENST00000499006 TSR2Q969E8 191 aaKnown RBP25.43■■□□□ 1.66
LINC01550-201ENST00000499006 SYTL4Q96C24 671 aaPredicted RBP25.43■■□□□ 1.66
LINC01550-201ENST00000499006 MYH16Q9H6N6 1097 aa25.43■■□□□ 1.66
LINC01550-201ENST00000499006 TSPYL4Q9UJ04 414 aa25.43■■□□□ 1.66
LINC01550-201ENST00000499006 ZNF790Q6PG37 636 aa25.4■■□□□ 1.66
LINC01550-201ENST00000499006 TNS1Q9HBL0 1735 aaKnown RBP25.4■■□□□ 1.66
LINC01550-201ENST00000499006 KCNQ3O43525 872 aa25.4■■□□□ 1.66
LINC01550-201ENST00000499006 SLC39A6Q13433 755 aa25.4■■□□□ 1.66
LINC01550-201ENST00000499006 PTF1AQ7RTS3 328 aa25.4■■□□□ 1.66
LINC01550-201ENST00000499006 KCPQ6ZWJ8 1503 aa25.4■■□□□ 1.66
LINC01550-201ENST00000499006 LY75O60449 1722 aa25.38■■□□□ 1.65
LINC01550-201ENST00000499006 BCL11BQ9C0K0 894 aaPredicted RBP25.38■■□□□ 1.65
LINC01550-201ENST00000499006 ATG3Q9NT62 314 aa25.38■■□□□ 1.65
LINC01550-201ENST00000499006 ASAP1Q9ULH1 1129 aa25.38■■□□□ 1.65
LINC01550-201ENST00000499006 C5P01031 1676 aa25.37■■□□□ 1.65
LINC01550-201ENST00000499006 EIF4A1P60842 406 aaKnown RBP25.36■■□□□ 1.65
LINC01550-201ENST00000499006 HEG1Q9ULI3 1381 aa25.36■■□□□ 1.65
LINC01550-201ENST00000499006 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
LINC01550-201ENST00000499006 TRIM37O94972 964 aa25.34■■□□□ 1.65
LINC01550-201ENST00000499006 CICQ96RK0 1608 aaPredicted RBP25.34■■□□□ 1.65
LINC01550-201ENST00000499006 EXOSC9Q06265 439 aaKnown RBP25.34■■□□□ 1.65
LINC01550-201ENST00000499006 TTC5Q8N0Z6 440 aa25.34■■□□□ 1.65
LINC01550-201ENST00000499006 LAMB4A4D0S4 1761 aa25.33■■□□□ 1.65
LINC01550-201ENST00000499006 ZNF496Q96IT1 587 aaPredicted RBP25.33■■□□□ 1.65
LINC01550-201ENST00000499006 KRT24Q2M2I5 525 aa25.32■■□□□ 1.64
LINC01550-201ENST00000499006 C8orf58Q8NAV2 365 aa25.32■■□□□ 1.64
LINC01550-201ENST00000499006 TJP1Q07157 1748 aa25.31■■□□□ 1.64
LINC01550-201ENST00000499006 RGPD3A6NKT7 1758 aaPredicted RBP25.3■■□□□ 1.64
LINC01550-201ENST00000499006 RGPD4Q7Z3J3 1758 aa25.3■■□□□ 1.64
LINC01550-201ENST00000499006 TSPYL6Q8N831 410 aa25.3■■□□□ 1.64
LINC01550-201ENST00000499006 SMARCC1Q92922 1105 aaPredicted RBP25.3■■□□□ 1.64
LINC01550-201ENST00000499006 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
LINC01550-201ENST00000499006 PALLDQ8WX93 1383 aa25.3■■□□□ 1.64
LINC01550-201ENST00000499006 CACNA1FO60840 1977 aa25.3■■□□□ 1.64
LINC01550-201ENST00000499006 TAF1LQ8IZX4 1826 aa25.29■■□□□ 1.64
LINC01550-201ENST00000499006 PTCD1O75127 700 aaKnown RBP25.28■■□□□ 1.64
LINC01550-201ENST00000499006 GIGYF1O75420 1035 aaPredicted RBP25.28■■□□□ 1.64
LINC01550-201ENST00000499006 SOS1Q07889 1333 aaPredicted RBP25.27■■□□□ 1.64
LINC01550-201ENST00000499006 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
LINC01550-201ENST00000499006 TWISTNBQ3B726 338 aaPredicted RBP25.27■■□□□ 1.64
LINC01550-201ENST00000499006 VAMP4O75379 141 aa25.26■■□□□ 1.63
LINC01550-201ENST00000499006 HOXB7P09629 217 aa25.26■■□□□ 1.63
LINC01550-201ENST00000499006 CT47B1P0C2W7 299 aaPredicted RBP25.26■■□□□ 1.63
LINC01550-201ENST00000499006 VSIG10Q8N0Z9 540 aa25.26■■□□□ 1.63
LINC01550-201ENST00000499006 SLC4A9Q96Q91 983 aa25.26■■□□□ 1.63
LINC01550-201ENST00000499006 ELL2O00472 640 aaPredicted RBP25.25■■□□□ 1.63
LINC01550-201ENST00000499006 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
LINC01550-201ENST00000499006 SNRPA1P09661 255 aaKnown RBP25.24■■□□□ 1.63
LINC01550-201ENST00000499006 RBM42Q9BTD8 480 aaKnown RBP25.24■■□□□ 1.63
LINC01550-201ENST00000499006 LOC102724428A0A0B4J2F2 783 aa25.23■■□□□ 1.63
LINC01550-201ENST00000499006 SIK1P57059 783 aa25.23■■□□□ 1.63
LINC01550-201ENST00000499006 PLSCR1O15162 318 aa25.21■■□□□ 1.63
LINC01550-201ENST00000499006 MYH14Q7Z406 1995 aaKnown RBP25.21■■□□□ 1.63
LINC01550-201ENST00000499006 APBA3O96018 575 aa25.2■■□□□ 1.62
LINC01550-201ENST00000499006 ZNF428Q96B54 188 aa25.2■■□□□ 1.62
LINC01550-201ENST00000499006 RREB1Q92766 1687 aa25.19■■□□□ 1.62
LINC01550-201ENST00000499006 USP16Q9Y5T5 823 aa25.19■■□□□ 1.62
LINC01550-201ENST00000499006 ATP6V1AP38606 617 aa25.18■■□□□ 1.62
LINC01550-201ENST00000499006 TEX13AQ9BXU3 409 aaPredicted RBP25.18■■□□□ 1.62
LINC01550-201ENST00000499006 ITPK1Q13572 414 aa25.17■■□□□ 1.62
LINC01550-201ENST00000499006 DNAJC10Q8IXB1 793 aa25.17■■□□□ 1.62
LINC01550-201ENST00000499006 CENPBP07199 599 aaPredicted RBP25.15■■□□□ 1.62
LINC01550-201ENST00000499006 RARSP54136 660 aaKnown RBP25.15■■□□□ 1.62
LINC01550-201ENST00000499006 HDGFL1Q5TGJ6 251 aa25.15■■□□□ 1.62
LINC01550-201ENST00000499006 CCDC125Q86Z20 511 aa25.15■■□□□ 1.62
LINC01550-201ENST00000499006 EIF2S2P20042 333 aaKnown RBP25.15■■□□□ 1.62
LINC01550-201ENST00000499006 ALDH1L2Q3SY69 923 aa25.15■■□□□ 1.62
LINC01550-201ENST00000499006 PROM2Q8N271 834 aa25.15■■□□□ 1.62
LINC01550-201ENST00000499006 CHMP4AQ9BY43 222 aa25.15■■□□□ 1.62
LINC01550-201ENST00000499006 CCNL1Q9UK58 526 aaPredicted RBP25.15■■□□□ 1.62
LINC01550-201ENST00000499006 RCAN3Q9UKA8 241 aa25.15■■□□□ 1.62
LINC01550-201ENST00000499006 CYP19A1P11511 503 aaPredicted RBP25.14■■□□□ 1.61
LINC01550-201ENST00000499006 SLC27A3Q5K4L6 730 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms