RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 MCM10Q7L590 875 aa16.68■□□□□ 0.26
TMEM39B-209ENST00000498613 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
TMEM39B-209ENST00000498613 RRP7AQ9Y3A4 280 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-209ENST00000498613 NUP188Q5SRE5 1749 aa16.67■□□□□ 0.26
TMEM39B-209ENST00000498613 EZH2Q15910 746 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-209ENST00000498613 TXNRD1Q16881 649 aa16.67■□□□□ 0.26
TMEM39B-209ENST00000498613 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-209ENST00000498613 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
TMEM39B-209ENST00000498613 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-209ENST00000498613 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
TMEM39B-209ENST00000498613 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
TMEM39B-209ENST00000498613 DCTN1Q14203 1278 aa16.65■□□□□ 0.26
TMEM39B-209ENST00000498613 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
TMEM39B-209ENST00000498613 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
TMEM39B-209ENST00000498613 SBF2Q86WG5 1849 aa16.65■□□□□ 0.26
TMEM39B-209ENST00000498613 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.25
TMEM39B-209ENST00000498613 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
TMEM39B-209ENST00000498613 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
TMEM39B-209ENST00000498613 NHSQ6T4R5 1651 aa16.63■□□□□ 0.25
TMEM39B-209ENST00000498613 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
TMEM39B-209ENST00000498613 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
TMEM39B-209ENST00000498613 CEMIPQ8WUJ3 1361 aa16.63■□□□□ 0.25
TMEM39B-209ENST00000498613 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 SIK1P57059 783 aa16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
TMEM39B-209ENST00000498613 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
TMEM39B-209ENST00000498613 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
TMEM39B-209ENST00000498613 GNAI1P63096 354 aa16.6■□□□□ 0.25
TMEM39B-209ENST00000498613 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
TMEM39B-209ENST00000498613 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
TMEM39B-209ENST00000498613 TSPYL4Q9UJ04 414 aa16.6■□□□□ 0.25
TMEM39B-209ENST00000498613 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
TMEM39B-209ENST00000498613 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
TMEM39B-209ENST00000498613 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
TMEM39B-209ENST00000498613 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
TMEM39B-209ENST00000498613 PROM2Q8N271 834 aa16.59■□□□□ 0.25
TMEM39B-209ENST00000498613 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
TMEM39B-209ENST00000498613 BTAF1O14981 1849 aa16.59■□□□□ 0.25
TMEM39B-209ENST00000498613 ITGB4P16144 1822 aa16.59■□□□□ 0.25
TMEM39B-209ENST00000498613 STARD3NLO95772 234 aa16.58■□□□□ 0.24
TMEM39B-209ENST00000498613 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
TMEM39B-209ENST00000498613 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
TMEM39B-209ENST00000498613 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
TMEM39B-209ENST00000498613 YY1P25490 414 aa16.57■□□□□ 0.24
TMEM39B-209ENST00000498613 WWC1Q8IX03 1113 aa16.57■□□□□ 0.24
TMEM39B-209ENST00000498613 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
TMEM39B-209ENST00000498613 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
TMEM39B-209ENST00000498613 AK7Q96M32 723 aa16.56■□□□□ 0.24
TMEM39B-209ENST00000498613 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
TMEM39B-209ENST00000498613 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
TMEM39B-209ENST00000498613 CHL1O00533 1208 aa16.55■□□□□ 0.24
TMEM39B-209ENST00000498613 FLAD1Q8NFF5 587 aa16.55■□□□□ 0.24
TMEM39B-209ENST00000498613 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
TMEM39B-209ENST00000498613 IL16Q14005 1332 aa16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 KCNQ4P56696 695 aa16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 SLC15A2Q16348 729 aa16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 ZNF496Q96IT1 587 aaPredicted RBP16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 MRC1P22897 1456 aa16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
TMEM39B-209ENST00000498613 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
TMEM39B-209ENST00000498613 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
TMEM39B-209ENST00000498613 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
TMEM39B-209ENST00000498613 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
TMEM39B-209ENST00000498613 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
TMEM39B-209ENST00000498613 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.23
TMEM39B-209ENST00000498613 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
TMEM39B-209ENST00000498613 MSH5O43196 834 aa16.51■□□□□ 0.23
TMEM39B-209ENST00000498613 EIF4A1P60842 406 aaKnown RBP16.51■□□□□ 0.23
TMEM39B-209ENST00000498613 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
TMEM39B-209ENST00000498613 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
TMEM39B-209ENST00000498613 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
TMEM39B-209ENST00000498613 KCNQ3O43525 872 aa16.5■□□□□ 0.23
TMEM39B-209ENST00000498613 ITPK1Q13572 414 aa16.5■□□□□ 0.23
TMEM39B-209ENST00000498613 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
TMEM39B-209ENST00000498613 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
TMEM39B-209ENST00000498613 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 GNPATO15228 680 aa16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 SPON1Q9HCB6 807 aa16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
TMEM39B-209ENST00000498613 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 SLC4A9Q96Q91 983 aa16.48■□□□□ 0.23
TMEM39B-209ENST00000498613 A0A087WZG4 1122 aa16.47■□□□□ 0.23
TMEM39B-209ENST00000498613 ADRA2BP18089 450 aa16.47■□□□□ 0.23
TMEM39B-209ENST00000498613 SSFA2P28290 1259 aa16.47■□□□□ 0.23
TMEM39B-209ENST00000498613 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
TMEM39B-209ENST00000498613 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms