RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
ECHDC2-220ENST00000498544 NUP188Q5SRE5 1749 aa23.2■■□□□ 1.3
ECHDC2-220ENST00000498544 BAG6P46379 1132 aa23.2■■□□□ 1.3
ECHDC2-220ENST00000498544 PIGBQ92521 554 aa23.2■■□□□ 1.3
ECHDC2-220ENST00000498544 TAF1LQ8IZX4 1826 aa23.19■■□□□ 1.3
ECHDC2-220ENST00000498544 APBA3O96018 575 aa23.19■■□□□ 1.3
ECHDC2-220ENST00000498544 TEFQ10587 303 aa23.19■■□□□ 1.3
ECHDC2-220ENST00000498544 MCM10Q7L590 875 aa23.19■■□□□ 1.3
ECHDC2-220ENST00000498544 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
ECHDC2-220ENST00000498544 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
ECHDC2-220ENST00000498544 NFATC2IPQ8NCF5 419 aa23.18■■□□□ 1.3
ECHDC2-220ENST00000498544 PLSCR1O15162 318 aa23.17■■□□□ 1.3
ECHDC2-220ENST00000498544 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
ECHDC2-220ENST00000498544 NCBP3Q53F19 620 aaKnown RBP23.17■■□□□ 1.3
ECHDC2-220ENST00000498544 C5P01031 1676 aa23.16■■□□□ 1.3
ECHDC2-220ENST00000498544 DCTN1Q14203 1278 aa23.16■■□□□ 1.3
ECHDC2-220ENST00000498544 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
ECHDC2-220ENST00000498544 TRIM35Q9UPQ4 493 aa23.15■■□□□ 1.3
ECHDC2-220ENST00000498544 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
ECHDC2-220ENST00000498544 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
ECHDC2-220ENST00000498544 COL5A3P25940 1745 aaPredicted RBP23.13■■□□□ 1.29
ECHDC2-220ENST00000498544 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
ECHDC2-220ENST00000498544 TJP1Q07157 1748 aa23.12■■□□□ 1.29
ECHDC2-220ENST00000498544 DEFB132Q7Z7B7 95 aa23.12■■□□□ 1.29
ECHDC2-220ENST00000498544 KCPQ6ZWJ8 1503 aa23.12■■□□□ 1.29
ECHDC2-220ENST00000498544 EN1Q05925 392 aaPredicted RBP23.11■■□□□ 1.29
ECHDC2-220ENST00000498544 CAMKK2Q96RR4 588 aa23.11■■□□□ 1.29
ECHDC2-220ENST00000498544 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
ECHDC2-220ENST00000498544 ATG3Q9NT62 314 aa23.11■■□□□ 1.29
ECHDC2-220ENST00000498544 ASAP1Q9ULH1 1129 aa23.11■■□□□ 1.29
ECHDC2-220ENST00000498544 CALD1Q05682 793 aaKnown RBP23.09■■□□□ 1.29
ECHDC2-220ENST00000498544 TAF7Q15545 349 aaPredicted RBP23.09■■□□□ 1.29
ECHDC2-220ENST00000498544 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
ECHDC2-220ENST00000498544 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
ECHDC2-220ENST00000498544 EZH2Q15910 746 aaKnown RBP23.07■■□□□ 1.28
ECHDC2-220ENST00000498544 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
ECHDC2-220ENST00000498544 SLC27A3Q5K4L6 730 aa23.07■■□□□ 1.28
ECHDC2-220ENST00000498544 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
ECHDC2-220ENST00000498544 TTC5Q8N0Z6 440 aa23.06■■□□□ 1.28
ECHDC2-220ENST00000498544 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
ECHDC2-220ENST00000498544 C4BP0C0L5 1744 aa23.05■■□□□ 1.28
ECHDC2-220ENST00000498544 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
ECHDC2-220ENST00000498544 WWC1Q8IX03 1113 aa23.05■■□□□ 1.28
ECHDC2-220ENST00000498544 TUBGCP6Q96RT7 1819 aa23.04■■□□□ 1.28
ECHDC2-220ENST00000498544 LOC102724428A0A0B4J2F2 783 aa23.04■■□□□ 1.28
ECHDC2-220ENST00000498544 SIK1P57059 783 aa23.04■■□□□ 1.28
ECHDC2-220ENST00000498544 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
ECHDC2-220ENST00000498544 PROM2Q8N271 834 aa23.04■■□□□ 1.28
ECHDC2-220ENST00000498544 CCNL1Q9UK58 526 aaPredicted RBP23.04■■□□□ 1.28
ECHDC2-220ENST00000498544 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
ECHDC2-220ENST00000498544 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
ECHDC2-220ENST00000498544 UBR3Q6ZT12 1888 aa23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 PTCD1O75127 700 aaKnown RBP23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 CFAP44Q96MT7 982 aa23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 RBM42Q9BTD8 480 aaKnown RBP23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 TSPYL4Q9UJ04 414 aa23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 IL16Q14005 1332 aa23.01■■□□□ 1.27
ECHDC2-220ENST00000498544 MYH14Q7Z406 1995 aaKnown RBP23■■□□□ 1.27
ECHDC2-220ENST00000498544 CHL1O00533 1208 aa23■■□□□ 1.27
ECHDC2-220ENST00000498544 WDR63Q8IWG1 891 aa23■■□□□ 1.27
ECHDC2-220ENST00000498544 VSIG10Q8N0Z9 540 aa23■■□□□ 1.27
ECHDC2-220ENST00000498544 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
ECHDC2-220ENST00000498544 LRRC4BQ9NT99 713 aa23■■□□□ 1.27
ECHDC2-220ENST00000498544 SALL2Q9Y467 1007 aaPredicted RBP23■■□□□ 1.27
ECHDC2-220ENST00000498544 HEG1Q9ULI3 1381 aa23■■□□□ 1.27
ECHDC2-220ENST00000498544 GNAI1P63096 354 aa22.99■■□□□ 1.27
ECHDC2-220ENST00000498544 ZNF496Q96IT1 587 aaPredicted RBP22.99■■□□□ 1.27
ECHDC2-220ENST00000498544 MIS18AQ9NYP9 233 aa22.99■■□□□ 1.27
ECHDC2-220ENST00000498544 ZNF521Q96K83 1311 aa22.99■■□□□ 1.27
ECHDC2-220ENST00000498544 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
ECHDC2-220ENST00000498544 ATP6V1AP38606 617 aa22.98■■□□□ 1.27
ECHDC2-220ENST00000498544 SLC4A9Q96Q91 983 aa22.98■■□□□ 1.27
ECHDC2-220ENST00000498544 SRCAPQ6ZRS2 3230 aa22.98■■□□□ 1.27
ECHDC2-220ENST00000498544 KCNQ3O43525 872 aa22.97■■□□□ 1.27
ECHDC2-220ENST00000498544 LAS1LQ9Y4W2 734 aaKnown RBP22.97■■□□□ 1.27
ECHDC2-220ENST00000498544 KCNQ4P56696 695 aa22.96■■□□□ 1.27
ECHDC2-220ENST00000498544 ITPK1Q13572 414 aa22.95■■□□□ 1.26
ECHDC2-220ENST00000498544 EIF4A1P60842 406 aaKnown RBP22.94■■□□□ 1.26
ECHDC2-220ENST00000498544 MBIPQ9NS73 344 aa22.94■■□□□ 1.26
ECHDC2-220ENST00000498544 HNRNPUQ00839 825 aaKnown RBP eCLIP22.93■■□□□ 1.26
ECHDC2-220ENST00000498544 LINC00116Q8NCU8 138 aa22.93■■□□□ 1.26
ECHDC2-220ENST00000498544 SNRPA1P09661 255 aaKnown RBP22.92■■□□□ 1.26
ECHDC2-220ENST00000498544 NBPF14Q5TI25 921 aa22.92■■□□□ 1.26
ECHDC2-220ENST00000498544 TEX13AQ9BXU3 409 aaPredicted RBP22.92■■□□□ 1.26
ECHDC2-220ENST00000498544 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
ECHDC2-220ENST00000498544 CNTNAP4Q9C0A0 1308 aa22.91■■□□□ 1.26
ECHDC2-220ENST00000498544 DNAJC10Q8IXB1 793 aa22.91■■□□□ 1.26
ECHDC2-220ENST00000498544 ANO8Q9HCE9 1232 aaPredicted RBP22.9■■□□□ 1.26
ECHDC2-220ENST00000498544 STK32BQ9NY57 414 aa22.9■■□□□ 1.26
ECHDC2-220ENST00000498544 CASZ1Q86V15 1759 aa22.9■■□□□ 1.26
ECHDC2-220ENST00000498544 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
ECHDC2-220ENST00000498544 GOLGA2Q08379 1002 aa22.89■■□□□ 1.25
ECHDC2-220ENST00000498544 AKT1S1Q96B36 256 aa22.89■■□□□ 1.25
ECHDC2-220ENST00000498544 MYH16Q9H6N6 1097 aa22.89■■□□□ 1.25
ECHDC2-220ENST00000498544 CACNA1FO60840 1977 aa22.89■■□□□ 1.25
ECHDC2-220ENST00000498544 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
ECHDC2-220ENST00000498544 STARD3NLO95772 234 aa22.88■■□□□ 1.25
ECHDC2-220ENST00000498544 CYP19A1P11511 503 aaPredicted RBP22.88■■□□□ 1.25
ECHDC2-220ENST00000498544 ZNF827Q17R98 1081 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms